Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 8.2e-174 613.6 306 100.0
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 4.3e-122 441.8 311 68.8
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 4.9e-118 428.3 304 68.1
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 6.4e-118 427.9 304 68.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.4e-117 426.8 304 68.8
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 4.1e-117 425.2 304 67.4
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 4.1e-117 425.2 304 67.4
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 1.6e-116 423.3 304 66.8
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 2.0e-116 422.9 304 67.8
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 6.0e-116 421.4 304 66.8
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 2.9e-110 402.5 289 66.8
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 6.0e-108 394.8 294 65.0
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 3.7e-102 375.6 310 61.3
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.3e-99 366.3 310 60.0
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 3.0e-99 365.9 310 59.7
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.5e-98 363.6 310 59.4
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 2.1e-97 359.8 308 57.8
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 8.1e-97 357.8 308 58.4
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 1.1e-96 357.5 308 57.8
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 1.4e-96 357.1 308 57.8
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 5.2e-96 355.1 309 58.6
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 5.2e-96 355.1 308 58.4
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 6.8e-96 354.8 320 56.9
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.2e-95 354.0 308 58.1
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.2e-95 354.0 308 58.4
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 1.5e-95 353.6 308 57.8
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.4e-95 352.4 308 57.8
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 7.6e-95 351.3 308 58.8
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 7.6e-95 351.3 309 57.0
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 1.3e-94 350.5 308 58.4
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 4.9e-94 348.6 309 56.6
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 6.4e-94 348.2 308 56.2
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.9e-93 346.7 308 57.5
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 2.4e-93 346.3 309 56.6
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 4.2e-93 345.5 308 57.8
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 7.8e-92 341.3 308 56.8
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 7.8e-92 341.3 308 55.8
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 1.0e-91 340.9 308 54.5
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 3.9e-91 339.0 309 54.0
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 3.9e-91 339.0 308 54.5
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 5.1e-91 338.6 306 54.6
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.9e-90 336.7 308 54.2
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.6e-89 333.6 308 53.9
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 1.6e-89 333.6 308 53.9
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 1.8e-88 330.1 308 53.6
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 4.0e-88 328.9 308 53.2
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 2.6e-87 326.2 309 53.4
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 7.6e-87 324.7 308 51.3
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 9.9e-87 324.3 308 53.6
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 9.9e-87 324.3 308 53.6
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 9.9e-87 324.3 308 53.2
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 3.8e-86 322.4 308 50.3
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 1.1e-85 320.9 308 53.6
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 1.4e-85 320.5 239 66.1
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 3.2e-85 319.3 355 49.9
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 7.1e-85 318.2 308 52.3
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 1.2e-84 317.4 308 51.3
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 2.1e-84 316.6 269 58.0
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 2.1e-84 316.6 354 49.2
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 4.6e-84 315.5 305 51.1
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 1.0e-83 314.3 306 50.0
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 1.3e-83 313.9 309 53.1
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.3e-83 313.9 308 51.9
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 6.6e-83 311.6 308 50.0
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 1.1e-82 310.8 308 51.9
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.9e-82 310.1 308 49.7
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 2.5e-82 309.7 312 50.6
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 5.6e-82 308.5 309 50.8
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 7.3e-82 308.1 307 50.8
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 2.8e-81 306.2 430 41.4
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 3.6e-81 305.8 306 49.3
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 1.1e-80 304.3 306 50.0
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 1.8e-80 303.5 303 49.8
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.5e-79 300.4 305 48.2
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 5.8e-79 298.5 357 44.8
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 5.8e-79 298.5 341 46.3
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 7.6e-79 298.1 308 46.1
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.7e-78 297.0 305 47.5
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 2.9e-78 296.2 305 47.2
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 9.3e-77 291.2 309 49.5
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 2.1e-76 290.0 309 48.9
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 3.5e-76 289.3 309 46.9
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 8.7e-75 284.6 309 48.2
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 3.3e-74 282.7 294 49.3
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 4.5e-71 272.3 238 56.7
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 1.3e-70 270.8 311 45.3
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 3.8e-70 269.2 309 47.9
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 8.4e-70 268.1 243 58.4
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.0e-67 261.2 250 53.2
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 7.4e-66 255.0 238 52.9
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 2.8e-65 253.1 306 44.4
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 4.8e-65 252.3 315 44.8
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.2e-63 247.7 268 48.1
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.6e-63 246.5 268 47.8
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 1.5e-58 230.7 293 39.2
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 1.9e-58 230.3 223 51.6
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 6.3e-57 225.3 239 47.3
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 2.6e-55 219.9 221 50.7
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 6.5e-54 215.3 304 39.8
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.2e-49 200.3 232 46.1
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 6.3e-49 198.7 289 35.6
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 2.6e-47 193.4 175 58.3
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 1.3e-41 174.5 243 39.9
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.7e-38 164.1 278 30.6
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.7e-30 137.5 115 54.8
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.7e-20 103.6 114 46.5
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.9e-17 92.8 65 67.7
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.8e-16 90.9 65 66.2
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 5.4e-16 89.4 63 60.3
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 7.0e-16 89.0 65 60.0
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 2.3e-14 84.0 63 60.3
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 2.1e-12 77.4 64 57.8


User provided reference genes

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