Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 5.1e-102 374.4 188 100.0
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 7.0e-83 310.8 186 83.3
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 1.2e-82 310.1 184 84.8
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 2.0e-82 309.3 186 83.3
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.0e-81 307.0 182 85.2
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.7e-81 306.2 184 83.2
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 5.0e-81 304.7 181 84.0
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 5.0e-81 304.7 181 84.0
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 6.5e-81 304.3 183 82.5
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 9.4e-80 300.4 175 84.6
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 1.0e-78 297.0 185 81.1
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 6.7e-78 294.3 185 79.5
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.0e-74 282.7 183 77.0
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 5.5e-72 274.6 158 86.7
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-71 273.5 158 86.1
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.0e-70 270.4 183 73.2
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 5.2e-70 268.1 184 72.8
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 2.8e-68 262.3 164 80.5
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.4e-67 260.0 174 72.4
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 9.1e-67 257.3 174 71.8
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 2.0e-66 256.1 174 70.1
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 2.7e-66 255.8 184 67.4
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 4.5e-66 255.0 175 70.3
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 7.7e-66 254.2 175 70.9
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 2.9e-65 252.3 170 73.5
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 5.0e-65 251.5 174 70.1
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 5.0e-65 251.5 169 71.6
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.5e-64 250.0 187 67.4
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 3.2e-64 248.8 169 71.0
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 4.2e-64 248.4 166 71.7
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 5.5e-64 248.1 211 60.7
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 5.5e-64 248.1 174 68.4
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 9.5e-64 247.3 170 70.0
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.2e-63 246.9 170 69.4
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.2e-63 246.9 170 69.4
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 2.8e-63 245.7 189 66.7
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 3.6e-63 245.4 169 70.4
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.6e-63 245.4 174 67.8
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 4.7e-63 245.0 174 67.8
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.4e-62 243.4 166 69.9
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.8e-62 243.0 170 69.4
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.3e-62 242.7 171 69.6
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 4.0e-62 241.9 176 68.2
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 4.0e-62 241.9 169 69.2
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 5.2e-62 241.5 174 66.7
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 5.2e-62 241.5 189 62.4
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 8.8e-62 240.7 173 68.8
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.2e-61 240.4 189 62.4
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 4.4e-61 238.4 170 68.8
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 7.5e-61 237.7 169 65.1
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.7e-60 236.5 185 62.7
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.7e-60 236.5 165 69.7
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 3.7e-60 235.3 185 62.2
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 4.9e-60 235.0 165 66.7
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 6.3e-60 234.6 169 65.7
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.1e-59 233.8 171 67.3
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.4e-59 233.4 176 63.6
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 1.4e-59 233.4 190 59.5
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 7.0e-59 231.1 186 61.3
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 5.9e-58 228.0 189 61.4
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 7.8e-58 227.6 162 67.3
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 2.9e-57 225.7 163 66.3
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 6.6e-57 224.6 156 67.3
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 6.6e-57 224.6 166 65.7
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 7.3e-56 221.1 168 61.3
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 9.5e-56 220.7 182 57.7
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 9.5e-56 220.7 175 61.1
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.2e-55 220.3 158 66.5
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 8.0e-55 217.6 175 60.6
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.2e-53 213.8 174 60.9
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 2.0e-53 213.0 175 59.4
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 3.4e-53 212.2 158 63.3
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 2.2e-52 209.5 162 63.6
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.8e-51 206.5 138 73.2
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 2.4e-51 206.1 165 64.2
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 5.4e-51 204.9 152 64.5
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 9.2e-51 204.1 165 58.2
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 5.9e-50 201.4 150 64.7
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 5.9e-50 201.4 185 54.1
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 7.8e-50 201.1 268 44.8
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.8e-46 189.9 161 62.1
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 2.6e-45 186.0 161 55.3
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 9.8e-45 184.1 199 52.8
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.7e-44 183.3 173 48.6
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 3.7e-44 182.2 158 57.6
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 1.4e-43 180.3 153 60.8
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 7.8e-42 174.5 158 51.3
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 4.3e-40 168.7 121 67.8
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.2e-39 167.2 125 65.6
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-38 162.9 186 52.7
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 3.1e-38 162.5 97 82.5
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 3.4e-37 159.1 152 50.7
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 7.5e-37 157.9 120 65.0
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.3e-36 157.1 153 54.2
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 2.9e-36 156.0 161 47.8
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 6.4e-36 154.8 117 63.2
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 1.1e-35 154.1 109 69.7
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 4.1e-35 152.1 133 67.7
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.5e-34 149.1 132 53.8
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 6.0e-34 148.3 117 58.1
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.0e-33 147.5 133 56.4
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.3e-33 147.1 97 72.2
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.7e-33 146.7 105 62.9
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.1e-33 145.2 105 61.0
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 5.1e-33 145.2 162 48.8
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.1e-32 144.1 107 64.5
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.4e-30 137.1 109 62.4
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 3.1e-30 136.0 98 68.4
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 4.4e-29 132.1 118 56.8
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 5.1e-25 118.6 75 80.0
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.7e-20 103.6 140 40.0
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 5.4e-19 98.6 121 43.0
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 7.3e-16 88.2 86 44.2
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.8e-14 83.6 155 29.7
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 2.4e-14 83.2 62 58.1
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.5e-13 80.5 49 79.6
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 3.8e-12 75.9 49 73.5
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 8.1e-07 58.2 36 80.6


User provided reference genes

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