Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104798770 Tarenaya hassleriana HOM05D012777 ORTHO05D009905 6.3e-86 320.9 176 100.0
AL1G58320 Arabidopsis lyrata HOM05D012777 ORTHO05D009905 1.1e-24 117.5 174 56.9
Thhalv10012178m.g Eutrema salsugineum HOM05D012777 ORTHO05D009905 4.0e-24 115.5 143 60.1
Carub.0001s3969 Capsella rubella HOM05D012777 ORTHO05D009905 9.9e-23 110.9 136 65.4
AT1G50650 Arabidopsis thaliana HOM05D012777 ORTHO05D009905 3.8e-22 109.0 152 59.9
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 1.1e-21 107.5 132 60.6
BcaC08g43242 Brassica carinata HOM05D012777 ORTHO05D009905 4.6e-20 102.1 139 60.4
C06p05910 Brassica napus HOM05D012777 ORTHO05D009905 7.8e-20 101.3 139 61.2
BolC6t35704H Brassica oleracea HOM05D012777 ORTHO05D009905 7.8e-20 101.3 139 61.2
Sp1g37480 Schrenkiella parvula HOM05D012777 ORTHO05D009905 7.8e-20 101.3 126 65.9
BraA06t23503Z Brassica rapa HOM05D012777 ORTHO05D009905 1.7e-19 100.1 139 60.4
A06p02970 Brassica napus HOM05D012777 ORTHO05D009905 8.7e-19 97.8 139 59.7
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 1.5e-18 97.1 167 52.1
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 2.1e-17 93.2 120 62.5
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 4.8e-17 92.0 120 63.3
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 4.8e-17 92.0 120 63.3
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 1.1e-16 90.9 107 43.9
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 1.4e-16 90.5 113 65.5
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 9.0e-16 87.8 148 50.7
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 1.2e-15 87.4 123 61.0
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 1.2e-15 87.4 118 62.7
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 1.5e-15 87.0 142 55.6
CARHR040700 Cardamine hirsuta HOM05D012777 ORTHO05D009905 2.0e-15 86.7 163 54.0
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 3.4e-15 85.9 145 57.2
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 5.8e-15 85.1 124 58.9
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 5.8e-15 85.1 150 50.0
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 1.3e-14 84.0 135 56.3
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 2.2e-14 83.2 149 53.7
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 2.9e-14 82.8 147 50.3
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 4.9e-14 82.0 104 38.5
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 6.4e-14 81.6 115 59.1
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 1.9e-13 80.1 71 54.9
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 2.4e-13 79.7 124 58.9
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 3.2e-13 79.3 144 48.6
Manes.15G067600 Manihot esculenta HOM05D008051 ORTHO05D009905 4.2e-13 79.0 114 40.4
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 4.2e-13 79.0 145 53.1
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 7.1e-13 78.2 162 51.9
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 7.1e-13 78.2 158 50.0
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 7.1e-13 78.2 147 47.6
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 9.3e-13 77.8 157 50.3
Sabra11G0072200 Salix brachista HOM05D008051 ORTHO05D009905 2.7e-12 76.3 54 61.1
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 3.5e-12 75.9 145 51.7
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 4.6e-12 75.5 153 49.7
MD11G1211300 Malus domestica HOM05D008051 ORTHO05D009905 4.6e-12 75.5 73 50.7
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 6.0e-12 75.1 157 49.7
ATR0752G075 Amborella trichopoda HOM05D008051 ORTHO05D009905 1.0e-11 74.3 71 46.5
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 2.3e-11 73.2 121 57.0
Cpa.g.sc12.259 Carica papaya HOM05D008051 ORTHO05D009905 5.1e-11 72.0 86 45.3
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 8.7e-11 71.2 129 54.3
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 1.1e-10 70.9 154 51.3
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 1.5e-10 70.5 64 48.4
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 1.5e-10 70.5 74 43.2
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 1.9e-10 70.1 46 65.2
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 3.3e-10 69.3 100 37.0
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 3.3e-10 69.3 119 55.5
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 9.6e-10 67.8 101 37.6
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 1.6e-09 67.0 116 56.9
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 2.8e-09 66.2 67 46.3
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 1.1e-08 64.3 94 61.7
Nn7g36860 Nelumbo nucifera HOM05D008051 ORTHO05D009905 1.8e-08 63.5 61 47.5
MSTRG.4127 Avicennia marina HOM05D008051 ORTHO05D009905 3.1e-08 62.8 124 54.0
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 4.0e-08 62.4 151 47.0
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 9.0e-08 61.2 47 51.1
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 1.2e-07 60.8 45 60.0
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 1.2e-07 60.8 45 60.0
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 1.2e-07 60.8 45 60.0
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 2.6e-07 59.7 121 52.9
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 9.9e-07 57.8 101 59.4
Nn1g07253 Nelumbo nucifera HOM05D008051 ORTHO05D009905 9.9e-07 57.8 61 47.5
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 2.9e-06 56.2 96 35.4
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 2.9e-06 56.2 99 59.6
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 3.8e-06 55.8 166 43.4


User provided reference genes

Program Settings