Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 5.1e-128 461.5 301 100.0
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 3.5e-68 262.7 321 72.0
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 2.6e-39 166.8 324 40.1
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 5.8e-39 165.6 325 40.0
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 1.3e-38 164.5 324 42.9
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 1.3e-38 164.5 324 39.5
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 2.9e-38 163.3 324 45.1
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.9e-37 160.6 324 38.3
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 1.2e-36 157.9 328 39.3
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 1.0e-35 154.8 338 47.3
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 1.0e-35 154.8 351 41.9
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 8.1e-33 145.2 227 44.1
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 1.8e-32 144.1 330 40.9
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 3.1e-32 143.3 232 42.2
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 5.3e-32 142.5 231 43.3
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 6.9e-32 142.1 327 36.1
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 2.6e-31 140.2 214 45.3
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 2.6e-31 140.2 325 36.9
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 3.4e-31 139.8 227 44.1
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 7.6e-31 138.7 227 43.6
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 3.8e-30 136.3 220 43.6
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 1.9e-29 134.0 230 42.2
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 2.4e-29 133.7 210 46.2
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 4.2e-29 132.9 225 42.7
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 4.6e-28 129.4 218 43.1
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 2.3e-27 127.1 218 43.1
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 8.7e-27 125.2 219 44.7
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 1.1e-26 124.8 215 43.7
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 1.5e-26 124.4 211 42.2
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 1.5e-26 124.4 209 44.5
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.9e-26 124.0 221 44.8
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.3e-26 123.2 220 41.8
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 7.3e-26 122.1 235 40.9
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 9.6e-26 121.7 220 40.9
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 1.6e-25 120.9 213 43.2
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 2.8e-25 120.2 161 49.1
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 3.6e-25 119.8 219 42.5
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 3.6e-25 119.8 209 41.1
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 3.6e-25 119.8 227 40.1
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 4.8e-25 119.4 210 41.4
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 1.1e-24 118.2 224 40.6
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.1e-24 118.2 235 40.0
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 1.1e-24 118.2 225 41.3
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 1.4e-24 117.9 225 41.3
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.4e-24 117.9 359 32.0
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.8e-24 117.5 226 38.9
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.8e-24 117.5 230 39.6
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 2.4e-24 117.1 216 43.1
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.1e-24 116.7 217 41.5
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 6.9e-24 115.5 221 40.7
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 9.0e-24 115.2 218 41.7
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 1.5e-23 114.4 211 41.7
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 2.0e-23 114.0 227 41.0
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 3.4e-23 113.2 221 40.7
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 4.5e-23 112.8 209 40.7
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.8e-23 112.5 220 40.9
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 5.8e-23 112.5 223 40.4
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 9.9e-23 111.7 234 40.2
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 1.3e-22 111.3 211 41.2
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.7e-22 110.9 222 39.2
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.7e-22 110.9 227 39.2
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 3.8e-22 109.8 216 41.2
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 4.9e-22 109.4 74 74.3
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 8.4e-22 108.6 71 76.1
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 1.1e-21 108.2 226 40.3
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.4e-21 107.8 217 37.8
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 4.2e-21 106.3 73 75.3
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 4.2e-21 106.3 216 38.4
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 4.2e-21 106.3 210 41.4
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 9.3e-21 105.1 224 39.3
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 9.3e-21 105.1 216 40.3
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 9.3e-21 105.1 303 32.7
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.2e-20 104.8 231 38.1
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 2.1e-20 104.0 224 40.6
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 2.1e-20 104.0 208 38.5
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 6.0e-20 102.4 210 42.9
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 1.0e-19 101.7 209 38.8
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 1.0e-19 101.7 71 73.2
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.3e-19 101.3 220 39.1
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 1.3e-19 101.3 206 38.8
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 2.3e-19 100.5 219 40.6
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 5.1e-19 99.4 224 39.3
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 6.7e-19 99.0 61 78.7
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 6.7e-19 99.0 222 39.6
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 8.7e-19 98.6 233 39.9
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 1.5e-18 97.8 224 37.5
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 3.3e-18 96.7 227 39.6
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 4.3e-18 96.3 197 38.1
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 4.3e-18 96.3 230 38.7
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 7.4e-18 95.5 217 37.8
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 7.4e-18 95.5 198 37.9
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 6.2e-17 92.4 207 36.2
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 6.2e-17 92.4 61 70.5
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.8e-16 90.9 58 75.9
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 9.0e-16 88.6 212 38.7
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.5e-13 80.5 207 34.8
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 7.9e-12 75.5 54 72.2
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 7.9e-12 75.5 205 35.6
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.3e-11 73.9 52 69.2
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.0e-11 73.6 187 36.4
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 3.9e-11 73.2 208 32.7
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 5.6e-10 69.3 201 34.8
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 8.2e-09 65.5 237 30.0
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 2.0e-07 60.8 37 81.1
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.0e-06 58.5 65 44.6
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 1.7e-06 57.8 71 43.7


User provided reference genes

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