Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.4e-124 448.4 226 100.0
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.1e-122 443.4 226 98.7
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.1e-122 441.8 226 98.2
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 6.4e-107 391.0 225 86.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 6.6e-104 380.9 218 87.6
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.8e-102 375.6 225 84.4
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 3.6e-102 375.2 225 82.2
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 2.6e-100 369.0 225 81.8
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 7.5e-100 367.5 224 82.6
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 4.9e-99 364.8 224 81.7
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.9e-98 362.8 219 83.1
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.2e-97 360.1 221 83.3
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.6e-97 359.8 219 83.1
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 3.5e-97 358.6 219 80.8
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 3.5e-97 358.6 208 87.0
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 6.0e-97 357.8 219 82.6
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.0e-96 357.1 210 85.2
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.3e-96 356.7 221 79.6
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 2.3e-96 355.9 219 83.6
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.0e-96 355.5 221 81.9
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.9e-95 352.8 207 84.1
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.9e-95 352.8 210 83.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.3e-95 351.7 219 81.7
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 4.3e-95 351.7 215 81.4
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 9.5e-95 350.5 214 81.8
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.6e-94 349.7 219 80.4
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.1e-94 349.4 213 80.8
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 2.8e-94 349.0 219 80.8
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.8e-94 349.0 214 80.8
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 3.6e-94 348.6 213 80.8
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 3.6e-94 348.6 219 79.5
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 3.6e-94 348.6 219 81.3
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.1e-93 347.1 225 77.3
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.1e-93 347.1 217 79.7
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.1e-93 347.1 219 80.8
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.4e-93 346.7 217 80.6
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.3e-93 345.9 218 78.9
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 4.0e-93 345.1 212 82.1
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 5.2e-93 344.7 218 78.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 8.9e-93 344.0 219 79.9
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 8.9e-93 344.0 225 74.7
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 8.9e-93 344.0 225 74.7
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.5e-92 343.2 219 81.3
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.5e-92 343.2 217 78.8
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 2.6e-92 342.4 247 72.9
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 2.6e-92 342.4 247 72.9
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 2.6e-92 342.4 219 78.5
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 2.6e-92 342.4 209 81.3
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 3.4e-92 342.0 220 78.2
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 4.4e-92 341.7 228 75.4
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.8e-92 341.3 225 77.8
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.8e-92 341.3 225 77.8
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 5.8e-92 341.3 223 80.3
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.3e-91 340.1 219 78.1
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.7e-91 339.7 206 81.1
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.7e-91 339.7 219 77.2
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.9e-91 338.2 214 77.6
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 6.4e-91 337.8 214 77.6
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.9e-90 336.3 210 80.0
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.9e-90 336.3 210 80.0
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.9e-90 336.3 219 77.2
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 3.2e-90 335.5 210 79.5
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 3.2e-90 335.5 219 76.7
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 4.1e-90 335.1 219 75.8
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 4.1e-90 335.1 219 76.3
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 4.1e-90 335.1 220 74.5
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 7.1e-90 334.3 229 73.8
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 7.1e-90 334.3 206 81.6
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 9.2e-90 334.0 211 77.3
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.2e-89 333.6 219 74.9
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 1.6e-89 333.2 207 80.2
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 1.6e-89 333.2 208 78.8
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 2.1e-89 332.8 210 77.6
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 3.5e-89 332.0 209 78.9
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 4.6e-89 331.6 210 78.1
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 6.0e-89 331.3 207 79.2
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.3e-88 330.1 210 77.6
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 5.1e-88 328.2 240 70.8
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.5e-87 326.6 208 76.9
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.5e-87 325.9 225 75.1
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.6e-86 323.2 196 83.2
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 3.6e-86 322.0 236 71.2
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 3.6e-86 322.0 204 77.9
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.6e-84 315.8 196 80.1
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 3.8e-83 312.0 219 77.2
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.9e-83 311.6 219 75.3
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.2e-81 307.0 195 77.4
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 3.3e-79 298.9 197 78.7
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.4e-77 292.7 183 77.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.4e-77 292.7 214 69.2
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.4e-74 283.5 207 68.6
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.9e-74 283.1 206 68.0
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 6.0e-73 278.1 231 65.8
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.9e-73 277.7 170 85.3
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.3e-72 276.2 219 69.9
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.3e-72 276.2 207 67.6
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 8.7e-72 274.2 207 67.1
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.1e-70 269.6 221 64.3
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.8e-69 266.5 173 79.2
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.2e-68 263.8 173 78.0
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.6e-68 262.7 202 71.3
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.9e-64 248.8 154 85.1
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 5.3e-61 238.4 141 83.0
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.1e-57 226.5 137 86.9
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.4e-53 213.0 183 63.9
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.1e-53 212.2 138 81.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.1e-45 187.6 138 68.8
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 5.3e-45 185.3 113 81.4
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 3.8e-43 179.1 120 76.7
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.2e-36 157.5 136 65.4
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.2e-35 153.3 115 70.4
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 5.0e-35 152.1 108 73.1
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.0e-32 142.9 94 72.3
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 1.5e-31 140.6 209 38.8
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 2.2e-30 136.7 204 37.3
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 7.7e-28 128.3 197 36.0
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 4.4e-23 112.5 101 61.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 7.5e-23 111.7 101 60.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.1e-21 107.8 81 71.6
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.8e-21 107.1 57 80.7
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 2.2e-19 100.1 85 55.3
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.2e-19 100.1 111 54.1
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 1.2e-07 61.2 47 66.0


User provided reference genes

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