Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR677G0006 Trochodendron aralioides HOM05D014619 ORTHO05D010925 4.8e-149 531.2 274 100.0
TAR203G0004 Trochodendron aralioides HOM05D014619 ORTHO05D010925 1.1e-129 466.8 274 90.5
Haze_16599 Corylus avellana HOM05D010074 ORTHO05D010925 3.0e-26 123.2 254 36.2
TAR376G0121 Trochodendron aralioides HOM05D014619 ORTHO05D010925 4.3e-25 119.4 112 61.6
GSVIVG01017452001 Vitis vinifera HOM05D010074 ORTHO05D010925 3.7e-24 116.3 150 50.7
Cfa020706 Carpinus fangiana HOM05D010074 ORTHO05D010925 6.3e-24 115.5 252 36.5
Dinv30633 Davidia involucrata HOM05D010074 ORTHO05D010925 4.5e-22 109.4 210 37.6
CiPaw.02G158200 Carya illinoinensis HOM05D010074 ORTHO05D010925 8.8e-18 95.1 235 33.2
Nn2g12172 Nelumbo nucifera HOM05D014619 ORTHO05D010925 9.7e-17 91.7 264 29.9
Prupe.3G092300 Prunus persica HOM05D016017 ORTHO05D010925 6.3e-16 89.0 165 40.6
PSO017G7269 Papaver somniferum HOM05D014619 ORTHO05D010925 2.0e-14 84.0 226 33.6
Actinidia14048 Actinidia chinensis HOM05D010074 ORTHO05D010925 1.7e-13 80.9 101 51.5
QL05p032487 Quercus lobata HOM05D010074 ORTHO05D010925 5.0e-13 79.3 243 30.9
QL05p033596 Quercus lobata HOM05D010074 ORTHO05D010925 1.4e-12 77.8 244 30.7
CANSAT56G4230 Cannabis sativa HOM05D010074 ORTHO05D010925 1.6e-11 74.3 122 38.5
MD17G1216200 Malus domestica HOM05D010074 ORTHO05D010925 2.7e-11 73.6 106 43.4
Nitab4.5_0002322g0010 Nicotiana tabacum HOM05D002983 ORTHO05D003451 3.6e-11 73.2 122 36.1
Manes.11G060900 Manihot esculenta HOM05D010074 ORTHO05D010925 1.0e-10 71.6 263 27.8
Cc04_g04620 Coffea canephora HOM05D010074 ORTHO05D017736 3.0e-10 70.1 128 40.6
Rhsim08G0210400 Rhododendron simsii HOM05D010074 ORTHO05D017736 8.8e-10 68.6 98 48.0
Ciclev10026559m.g Citrus clementina HOM05D010074 ORTHO05D010925 7.4e-09 65.5 143 37.8
CsaV3_4G001890 Cucumis sativus L. HOM05D002983 ORTHO05D003451 7.4e-09 65.5 106 43.4
Duzib235G0970 Durio zibethinus HOM05D018867 ORTHO05D010925 7.4e-09 65.5 231 28.6
TWI75G1240 Tripterygium wilfordii HOM05D010074 ORTHO05D010925 9.7e-09 65.1 97 41.2
Solyc03g117470.3 Solanum lycopersicum HOM05D002983 ORTHO05D003451 2.2e-08 63.9 124 33.9
Atru.chr1.2860 Acer truncatum HOM05D010074 ORTHO05D010925 2.8e-08 63.5 93 43.0
SGA_v2.0_scaffold37G14750 Striga asiatica HOM05D014619 ORTHO05D017736 4.8e-08 62.8 95 41.1
ClCG07G012260 Citrullus lanatus HOM05D002983 ORTHO05D003451 8.2e-08 62.0 109 35.8
Manes.04G109400 Manihot esculenta HOM05D010074 ORTHO05D010925 8.2e-08 62.0 200 30.0
Cpa.g.sc10.149 Carica papaya HOM05D010074 ORTHO05D010925 1.4e-07 61.2 182 36.3
Sopen03g036360 Solanum pennellii HOM05D002983 ORTHO05D017736 4.1e-07 59.7 137 32.8
Potri.003G030200 Populus trichocarpa HOM05D010074 ORTHO05D010925 5.3e-07 59.3 233 30.5
PGSC0003DMG400014206 Solanum tuberosum HOM05D002983 ORTHO05D017736 5.3e-07 59.3 120 32.5
RcHm_v2.0_Chr2g0134481 Rosa chinensis HOM05D016017 ORTHO05D010925 9.1e-07 58.5 100 39.0
Sed0004126 Sechium edule HOM05D002983 ORTHO05D003451 2.6e-06 57.0 112 36.6
FvH4_6g29300 Fragaria vesca HOM05D016017 ORTHO05D010925 7.7e-06 55.5 95 38.9
Thecc.06G032300 Theobroma cacao HOM05D018867 ORTHO05D010925 7.7e-06 55.5 50 60.0


User provided reference genes

Program Settings