Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.2e-102 375.2 199 100.0
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 9.4e-62 240.7 213 67.6
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.3e-55 220.3 205 63.4
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.4e-54 216.9 205 62.9
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 7.9e-53 211.1 206 62.6
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 3.0e-52 209.1 205 62.9
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 3.9e-52 208.8 200 63.0
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 2.2e-50 203.0 208 60.6
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.8e-49 199.9 210 58.1
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 3.1e-49 199.1 212 58.5
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 4.1e-49 198.7 215 55.3
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 4.5e-48 195.3 200 58.5
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 5.9e-48 194.9 204 57.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.7e-47 193.4 202 59.9
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 2.2e-47 193.0 211 57.8
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.2e-47 193.0 188 61.7
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 2.9e-47 192.6 213 56.3
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 6.5e-47 191.4 219 55.3
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 6.5e-47 191.4 206 58.7
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.5e-46 190.3 219 54.3
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 1.9e-46 189.9 211 56.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.2e-45 187.2 207 57.5
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.2e-45 187.2 220 54.1
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 3.6e-45 185.7 219 53.0
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 3.6e-45 185.7 207 55.6
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 6.1e-45 184.9 212 53.8
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 6.1e-45 184.9 212 53.8
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 6.1e-45 184.9 216 55.6
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 1.0e-44 184.1 202 54.5
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.0e-44 184.1 206 56.3
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 2.3e-44 183.0 213 55.4
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 6.7e-44 181.4 206 53.4
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 2.6e-43 179.5 208 54.3
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.2e-42 176.4 208 53.4
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 4.8e-42 175.3 206 55.8
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.1e-41 174.1 199 54.8
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.8e-41 173.3 213 53.5
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 2.4e-41 172.9 211 55.5
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 3.1e-41 172.6 199 53.3
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.5e-40 169.1 194 57.7
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 4.5e-40 168.7 192 55.7
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 1.0e-39 167.5 190 51.1
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.3e-39 167.2 199 51.3
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 1.7e-39 166.8 223 51.1
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.9e-39 166.0 207 50.7
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 3.8e-39 165.6 187 50.8
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 3.8e-39 165.6 191 56.0
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 6.5e-39 164.9 201 51.7
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 8.5e-39 164.5 200 54.5
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 1.5e-38 163.7 216 54.2
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 7.2e-38 161.4 195 51.8
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 1.6e-37 160.2 203 49.8
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.2e-34 149.8 229 46.7
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 4.8e-34 148.7 193 49.7
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 8.3e-34 147.9 207 46.9
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.4e-33 147.1 234 45.7
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.8e-33 146.7 219 48.9
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 1.2e-32 144.1 208 45.2
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.0e-32 143.3 208 48.1
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 2.0e-32 143.3 194 49.5
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 3.5e-32 142.5 191 48.2
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 7.7e-32 141.4 239 43.5
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.3e-31 140.6 141 58.9
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.7e-31 140.2 192 49.0
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 2.9e-31 139.4 189 46.6
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 5.0e-31 138.7 190 48.4
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.1e-30 137.5 192 49.5
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.9e-30 136.7 195 47.2
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 4.2e-30 135.6 187 50.3
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 4.7e-29 132.1 232 43.5
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.0e-28 131.0 202 44.1
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 5.2e-28 128.6 194 45.9
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 8.8e-28 127.9 183 48.1
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.6e-27 126.3 175 47.4
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 5.7e-27 125.2 204 42.6
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 7.5e-27 124.8 185 47.6
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 7.5e-27 124.8 175 48.0
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.2e-26 123.2 188 45.7
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 2.8e-26 122.9 185 47.0
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 8.3e-26 121.3 207 42.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.8e-25 120.2 188 43.6
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 3.1e-25 119.4 104 63.5
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 3.1e-25 119.4 158 49.4
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 1.0e-23 114.4 203 39.4
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.7e-23 113.6 203 42.9
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 1.9e-22 110.2 184 42.4
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 1.2e-21 107.5 147 53.1
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 2.1e-21 106.7 149 48.3
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 3.6e-21 105.9 188 42.0
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 8.0e-21 104.8 190 40.0
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 6.8e-20 101.7 103 58.3
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 3.2e-17 92.8 149 42.3
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.2e-16 90.9 202 37.1
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.1e-12 76.3 171 33.9
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 9.2e-09 64.7 229 27.5
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 2.0e-08 63.5 81 46.9
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 2.7e-08 63.2 91 44.0
SEGI_03822 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 3.0e-07 59.7 55 54.5
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 1.1e-06 57.8 95 40.0
SEGI_40281 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 1.9e-06 57.0 167 31.7


User provided reference genes

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