Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3668 Trochodendron aralioides HOM05D026975 ORTHO05D000252 2.6e-87 325.5 182 100.0
TAR624G0530 Trochodendron aralioides HOM05D000401 ORTHO05D000252 4.9e-33 145.2 216 49.1
MBI01_g06514_MAGBIO Magnolia biondii HOM05D000401 ORTHO05D000252 1.5e-21 107.1 203 38.4
Nn5g28012 Nelumbo nucifera HOM05D026975 ORTHO05D000252 3.3e-21 105.9 219 36.5
Nn5g28008 Nelumbo nucifera HOM05D026975 ORTHO05D000252 7.3e-21 104.8 219 36.1
Nn3g17829 Nelumbo nucifera HOM05D000401 ORTHO05D000252 1.4e-19 100.5 146 46.6
Dinv36634 Davidia involucrata HOM05D000401 ORTHO05D000252 1.8e-19 100.1 232 34.9
Manes.16G115800 Manihot esculenta HOM05D000401 ORTHO05D000252 1.8e-19 100.1 242 35.5
Gohir.D06G061200 Gossypium hirsutum HOM05D000401 ORTHO05D000252 2.4e-19 99.8 242 36.8
Gorai.010G071300 Gossypium raimondii HOM05D000401 ORTHO05D000252 9.0e-19 97.8 242 36.8
Duzib168G1191 Durio zibethinus HOM05D000401 ORTHO05D000252 3.4e-18 95.9 263 35.4
Nn5g28025 Nelumbo nucifera HOM05D026975 ORTHO05D000252 4.9e-17 92.0 108 50.0
Cfa021566 Carpinus fangiana HOM05D000401 ORTHO05D000252 1.6e-15 87.0 235 37.4
QL02p085275 Quercus lobata HOM05D000401 ORTHO05D000252 6.0e-15 85.1 239 37.7
Aqoxy7G01661 Aquilegia oxysepala HOM05D000401 ORTHO05D000252 7.9e-15 84.7 226 39.4
Duzib187G1081 Durio zibethinus HOM05D000401 ORTHO05D000252 2.3e-14 83.2 249 30.1
Gohir.A05G023300 Gossypium hirsutum HOM05D000401 ORTHO05D000252 2.3e-14 83.2 213 35.7
CSS0043063 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 3.9e-14 82.4 228 34.2
Nn2g11738 Nelumbo nucifera HOM05D000401 ORTHO05D000252 3.9e-14 82.4 236 35.2
Peaxi162Scf00546g00005 Petunia axillaris HOM05D000401 ORTHO05D000252 3.9e-14 82.4 206 35.0
Gohir.A06G062901 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.7e-14 81.6 242 35.5
Sabra18G0068000 Salix brachista HOM05D000401 ORTHO05D000252 8.7e-14 81.3 237 35.0
Nn4g22321 Nelumbo nucifera HOM05D000401 ORTHO05D000252 1.1e-13 80.9 225 33.8
Haze_25726 Corylus avellana HOM05D000401 ORTHO05D000252 1.5e-13 80.5 230 36.1
Potri.018G080100 Populus trichocarpa HOM05D000401 ORTHO05D000252 5.6e-13 78.6 236 32.2
Manes.03G020900 Manihot esculenta HOM05D000401 ORTHO05D000252 7.4e-13 78.2 243 31.7
TAR383G0966 Trochodendron aralioides HOM05D000401 ORTHO05D000252 9.6e-13 77.8 114 46.5
Haze_25719 Corylus avellana HOM05D000401 ORTHO05D000252 1.3e-12 77.4 230 36.1
Nn8g39175 Nelumbo nucifera HOM05D000401 ORTHO05D000252 2.8e-12 76.3 228 36.4
CSS0040663 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 3.6e-12 75.9 230 33.0
MBI04_g22008_MAGBIO Magnolia biondii HOM05D000401 ORTHO05D000252 8.1e-12 74.7 208 34.1
Thecc.09G110000 Theobroma cacao HOM05D000401 ORTHO05D000252 1.4e-11 73.9 251 30.3
Dinv41606 Davidia involucrata HOM05D000401 ORTHO05D000252 1.8e-11 73.6 226 33.6
Lalb_Chr16g0388201 Lupinus albus HOM05D000401 ORTHO05D000252 1.8e-11 73.6 235 34.9
Actinidia20371 Actinidia chinensis HOM05D000401 ORTHO05D000252 1.2e-10 70.9 201 32.8
Gohir.D05G024800 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.5e-10 70.5 239 31.0
Gorai.009G024900 Gossypium raimondii HOM05D000401 ORTHO05D000252 1.5e-10 70.5 239 31.0
ATR0315G001 Amborella trichopoda HOM05D000401 ORTHO05D000252 4.5e-10 68.9 173 31.2
Cpa.g.sc23.106 Carica papaya HOM05D000401 ORTHO05D000252 4.5e-10 68.9 252 32.9
Duzib150G0467 Durio zibethinus HOM05D000401 ORTHO05D000252 5.8e-10 68.6 252 29.0
CiPaw.04G163900 Carya illinoinensis HOM05D000401 ORTHO05D000252 9.9e-10 67.8 246 34.6
Nn3g16346 Nelumbo nucifera HOM05D000401 ORTHO05D000252 9.9e-10 67.8 40 75.0
Rhsim03G0242300 Rhododendron simsii HOM05D000401 ORTHO05D000252 1.7e-09 67.0 208 32.2
TWI34G0621 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 2.2e-09 66.6 231 29.0
Oeu055854.1 Olea europaea HOM05D000401 ORTHO05D000252 4.9e-09 65.5 178 34.3
CSS0035609 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 6.4e-09 65.1 204 30.9
Rhsim03G0242500 Rhododendron simsii HOM05D000401 ORTHO05D000252 8.4e-09 64.7 206 29.1
RhsimUnG0196900 Rhododendron simsii HOM05D000401 ORTHO05D000252 8.4e-09 64.7 206 29.1
Cc06_g09690 Coffea canephora HOM05D000401 ORTHO05D000252 1.4e-08 63.9 252 30.2
RhsimUnG0196700 Rhododendron simsii HOM05D000401 ORTHO05D000252 1.4e-08 63.9 208 31.2
ATR0315G032 Amborella trichopoda HOM05D000401 ORTHO05D000252 3.2e-08 62.8 181 30.9
MD15G1184600 Malus domestica HOM05D000401 ORTHO05D000252 2.1e-07 60.1 236 34.3
PGSC0003DMG400000313 Solanum tuberosum HOM05D000401 ORTHO05D000252 2.1e-07 60.1 238 28.6
Lalb_Chr05g0222871 Lupinus albus HOM05D000401 ORTHO05D000252 6.0e-07 58.5 239 33.1
VMungo0251G1019 Vigna mungo HOM05D000401 ORTHO05D000252 6.0e-07 58.5 248 27.4
Oeu002235.1 Olea europaea HOM05D000401 ORTHO05D000252 1.0e-06 57.8 209 28.7
Sabra06G0123700 Salix brachista HOM05D000401 ORTHO05D000252 1.3e-06 57.4 86 47.7
COL.COLO4_34930 Corchorus olitorius HOM05D000401 ORTHO05D000252 1.8e-06 57.0 58 51.7
AUR62021503 Chenopodium quinoa HOM05D000401 ORTHO05D000252 3.9e-06 55.8 156 42.3
CiPaw.03G231800 Carya illinoinensis HOM05D000401 ORTHO05D000252 5.1e-06 55.5 241 34.9
Atru.chr7.1353 Acer truncatum HOM05D000401 ORTHO05D000252 8.7e-06 54.7 50 54.0


User provided reference genes

Program Settings