Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 0.0e+00 1596.6 800 100.0
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 1.6e-232 810.1 798 57.0
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 3.2e-230 802.4 803 56.0
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.3e-226 790.4 545 75.6
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 6.6e-223 778.1 794 55.5
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 2.2e-218 763.1 793 54.6
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 3.5e-216 755.7 794 54.0
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 3.5e-208 729.2 791 52.3
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 6.4e-202 708.4 792 51.3
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 3.3e-198 696.0 797 51.4
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.6e-197 693.7 820 51.7
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 8.1e-197 691.4 791 48.4
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 1.0e-191 674.5 798 49.1
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 2.3e-191 673.3 798 49.0
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 5.1e-191 672.2 795 49.6
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 6.8e-188 661.8 801 49.4
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 5.8e-187 658.7 783 47.5
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 8.4e-186 654.8 799 49.8
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 3.2e-185 652.9 797 48.7
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 9.2e-185 651.4 795 49.8
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 7.8e-184 648.3 791 48.7
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 3.9e-183 646.0 799 48.7
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 1.5e-182 644.0 799 48.8
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.5e-182 643.3 804 48.0
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 3.3e-182 642.9 796 49.0
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 5.6e-182 642.1 791 48.0
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 9.6e-182 641.3 801 48.1
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.1e-181 640.2 804 48.8
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 5.8e-179 632.1 791 48.0
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 9.9e-179 631.3 796 47.5
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.3e-178 630.9 801 47.4
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 8.1e-173 611.7 852 44.5
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 4.0e-172 609.4 801 46.8
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 2.3e-167 593.6 790 45.9
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 6.7e-167 592.0 790 45.6
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 2.1e-165 587.0 790 45.4
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 8.2e-157 558.5 683 48.8
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 2.2e-154 550.4 784 43.4
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 2.2e-154 550.4 795 43.3
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 1.5e-150 537.7 837 41.6
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.9e-150 537.3 798 43.9
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 1.3e-149 534.6 778 42.5
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 1.6e-149 534.3 843 41.2
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 2.2e-149 533.9 796 42.8
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 6.3e-149 532.3 778 43.8
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 6.3e-149 532.3 796 42.0
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 2.0e-147 527.3 794 42.9
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 3.4e-147 526.6 796 42.1
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 2.2e-146 523.9 785 43.4
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 5.5e-145 519.2 788 42.0
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 6.7e-143 512.3 784 42.3
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 8.8e-143 511.9 741 44.1
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.3e-142 509.6 605 49.6
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 2.8e-141 506.9 789 42.3
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 3.7e-141 506.5 791 41.5
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 2.6e-139 500.4 794 39.9
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 6.1e-136 489.2 780 41.7
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 6.7e-135 485.7 799 39.7
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 6.7e-135 485.7 789 39.3
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 1.1e-134 485.0 794 40.3
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 4.8e-133 479.6 801 41.4
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 4.8e-133 479.6 789 40.6
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 4.1e-132 476.5 795 40.3
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 2.0e-131 474.2 811 40.8
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 1.3e-130 471.5 788 41.1
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 3.8e-130 469.9 796 39.6
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.5e-129 468.0 778 41.1
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.5e-129 467.2 780 41.4
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 2.7e-128 463.8 778 41.1
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 6.1e-128 462.6 798 39.0
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 8.0e-128 462.2 806 38.6
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 6.7e-127 459.1 781 40.7
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 8.8e-127 458.8 781 40.7
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 5.7e-126 456.1 797 39.9
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 9.7e-126 455.3 782 38.9
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.3e-125 454.9 648 45.1
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 2.8e-125 453.8 785 41.9
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 1.4e-124 451.4 791 39.3
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 3.1e-124 450.3 793 39.7
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 1.6e-123 448.0 803 38.9
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 2.6e-123 447.2 797 37.4
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 3.5e-123 446.8 794 37.4
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 3.5e-123 446.8 799 38.8
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 5.9e-123 446.0 794 37.5
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 1.3e-122 444.9 794 37.2
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 3.8e-122 443.4 794 36.9
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 3.2e-121 440.3 801 36.7
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 3.2e-121 440.3 801 36.7
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 1.2e-120 438.3 676 43.2
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 6.1e-120 436.0 795 37.0
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 5.2e-119 433.0 792 38.6
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 6.3e-117 426.0 759 40.1
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.3e-114 418.3 799 37.4
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 1.0e-111 408.7 608 45.4
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 1.0e-111 408.7 668 41.6
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.4e-111 408.3 483 49.7
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 7.0e-108 396.0 752 37.9
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 1.2e-107 395.2 828 37.1
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 9.5e-105 385.6 258 78.7
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 2.4e-100 370.9 753 36.0
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.7e-98 364.8 488 46.5
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 2.0e-94 351.3 802 33.8
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 9.8e-94 349.0 432 50.2
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 6.6e-90 336.3 821 32.8
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 5.6e-89 333.2 662 35.2
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 4.0e-87 327.0 399 46.6
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 7.3e-81 306.2 829 30.0
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 2.1e-75 288.1 856 29.6
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 2.7e-75 287.7 519 35.6
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 3.6e-72 277.3 429 41.7
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 2.4e-71 274.6 758 30.7
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 3.4e-70 270.8 406 43.8
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 4.9e-61 240.4 243 51.9
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 3.1e-55 221.1 307 45.6
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 7.4e-49 199.9 361 40.4
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 3.7e-48 197.6 254 50.4
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 6.9e-47 193.4 344 40.7
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 1.2e-43 182.6 377 35.0
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 3.0e-34 151.4 754 25.1
MBI16_g03132_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.2e-30 139.4 188 48.4
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 1.4e-28 132.5 121 52.9
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 9.4e-20 103.2 211 35.1
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 7.4e-17 93.6 150 38.7
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 1.6e-14 85.9 96 39.6
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 3.6e-11 74.7 209 26.3
AagrBONN_evm.TU.Sc2ySwM_117.1094 Anthoceros agrestis HOM05D005720 ORTHO05D006984 1.3e-08 66.2 378 23.5
Actinidia34180 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.1e-07 63.2 94 43.6
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 2.4e-07 62.0 136 37.5
Actinidia30732 Actinidia chinensis HOM05D005720 ORTHO05D006984 4.5e-06 57.8 71 47.9


User provided reference genes

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