Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 1.1e-171 607.1 431 100.0
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 1.6e-53 214.5 233 55.8
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 9.4e-51 205.3 470 49.8
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 1.4e-49 201.4 248 54.0
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 3.1e-46 190.3 248 49.6
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 5.4e-46 189.5 244 47.1
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 2.7e-45 187.2 495 48.1
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 1.7e-44 184.5 474 50.4
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 1.5e-43 181.4 239 48.1
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 9.5e-43 178.7 260 49.2
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 2.8e-42 177.2 255 47.8
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 5.2e-41 172.9 251 47.0
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 5.2e-41 172.9 251 47.0
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.0e-40 171.0 251 47.0
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 9.8e-40 168.7 247 48.2
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.7e-39 167.9 251 45.8
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.9e-39 166.4 446 48.9
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 6.3e-39 166.0 248 46.8
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.4e-38 164.9 247 47.0
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 1.4e-38 164.9 243 47.7
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 1.8e-38 164.5 245 46.9
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.1e-38 163.3 271 43.5
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 5.4e-38 162.9 241 49.0
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 1.2e-37 161.8 233 45.5
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 1.6e-37 161.4 228 46.5
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 2.7e-37 160.6 245 46.1
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 1.7e-36 157.9 243 43.6
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 2.9e-36 157.1 240 44.2
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 5.0e-36 156.4 243 45.7
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 5.0e-36 156.4 450 39.8
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 6.6e-36 156.0 243 44.4
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.8e-34 150.6 237 46.0
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 4.7e-34 149.8 237 43.0
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 6.2e-34 149.4 246 42.3
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 1.4e-33 148.3 245 43.3
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 2.3e-33 147.5 250 41.2
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 2.3e-33 147.5 281 42.0
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 4.0e-33 146.7 192 49.5
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 1.2e-32 145.2 227 44.1
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 2.2e-31 141.0 227 44.1
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 2.2e-31 141.0 257 43.2
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 2.9e-31 140.6 245 40.0
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 2.9e-31 140.6 219 46.6
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 6.4e-31 139.4 512 33.0
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 2.4e-30 137.5 266 40.2
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 7.0e-30 136.0 226 43.4
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 7.8e-29 132.5 209 42.6
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 2.3e-28 131.0 268 39.2
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 3.0e-28 130.6 252 38.1
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 5.0e-28 129.8 268 38.8
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 1.5e-27 128.3 195 47.7
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 5.6e-27 126.3 218 41.7
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 7.3e-27 125.9 205 43.4
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 9.5e-27 125.6 188 43.1
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.2e-26 125.2 237 39.7
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 3.6e-26 123.6 262 39.7
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 3.6e-26 123.6 249 37.8
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 6.2e-26 122.9 240 41.7
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 8.1e-26 122.5 260 38.1
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 2.3e-25 120.9 257 37.4
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 4.0e-25 120.2 248 39.9
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 1.2e-24 118.6 239 38.5
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.5e-24 118.2 449 33.9
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 1.5e-24 118.2 249 37.8
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 3.4e-24 117.1 233 40.3
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 5.8e-24 116.3 251 37.8
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 9.8e-24 115.5 199 38.7
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 1.3e-23 115.2 232 38.4
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 3.7e-23 113.6 243 37.4
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.9e-23 113.2 265 38.5
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 1.4e-22 111.7 236 36.9
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 1.4e-22 111.7 236 36.9
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 2.4e-22 110.9 266 35.3
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 3.2e-22 110.5 236 38.1
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 3.2e-22 110.5 257 35.4
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 5.4e-22 109.8 236 38.1
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 9.2e-22 109.0 247 36.8
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.1e-21 107.8 266 36.8
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 4.6e-21 106.7 222 35.1
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 6.0e-21 106.3 280 33.9
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 7.8e-21 105.9 325 32.3
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 7.8e-21 105.9 205 37.6
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 1.1e-19 102.1 240 37.1
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.5e-19 101.7 288 35.4
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 1.9e-19 101.3 181 40.9
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 1.9e-19 101.3 182 39.6
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.9e-19 101.3 209 40.2
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 4.3e-19 100.1 178 41.6
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 4.3e-19 100.1 199 41.7
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 5.6e-19 99.8 178 38.2
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 9.5e-19 99.0 178 39.9
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 2.1e-18 97.8 229 35.4
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 4.7e-18 96.7 186 39.8
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 4.4e-16 90.1 165 38.8
TAR624G0244 Trochodendron aralioides HOM05D006830 ORTHO05D008119 5.8e-16 89.7 57 84.2
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 7.6e-16 89.4 258 35.3
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 1.7e-15 88.2 129 45.0
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 6.4e-15 86.3 130 43.8
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 1.6e-13 81.6 238 32.4
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 1.5e-11 75.1 231 32.9
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 3.6e-10 70.5 62 62.9
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 5.8e-08 63.2 59 55.9
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 9.9e-08 62.4 155 32.3
Actinidia11494 Actinidia chinensis HOM05D040087 ORTHO05D008119 1.7e-07 61.6 99 45.5
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 1.7e-07 61.6 59 54.2
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 8.4e-07 59.3 77 45.5
ATR1127G221 Amborella trichopoda HOM05D006830 ORTHO05D008119 1.1e-06 58.9 337 27.3
Aqoxy4G03294 Aquilegia oxysepala HOM05D006830 ORTHO05D008119 2.4e-06 57.8 108 41.7


User provided reference genes

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