Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 0.0e+00 1546.2 782 100.0
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 0.0e+00 1101.3 787 73.7
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 5.1e-305 1050.8 789 69.8
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.1e-304 1049.7 782 70.7
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 6.3e-303 1043.9 788 69.8
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.8e-292 1008.1 780 68.6
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.7e-287 992.6 786 67.0
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.7e-284 982.6 783 64.8
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.4e-278 963.0 735 69.5
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 5.0e-276 954.5 784 65.1
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 8.2e-271 937.2 775 64.3
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.2e-269 933.3 734 66.3
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 9.4e-267 923.7 782 62.3
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 5.7e-264 914.4 789 61.6
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 1.3e-263 913.3 782 63.0
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.1e-262 910.2 782 62.9
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 5.4e-262 907.9 786 61.8
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 5.0e-260 901.4 790 62.0
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 8.9e-257 890.6 738 62.3
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 4.4e-256 888.3 780 60.9
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 7.5e-256 887.5 788 61.4
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.3e-255 886.7 1051 50.9
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 5.4e-254 881.3 792 60.2
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 9.5e-251 870.5 840 56.3
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 2.8e-250 869.0 807 58.0
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.6e-250 868.6 794 60.5
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 1.0e-249 867.1 714 64.0
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.4e-249 866.7 639 68.4
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 7.5e-248 860.9 803 57.3
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 9.8e-248 860.5 792 59.6
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 9.8e-248 860.5 633 68.9
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 2.2e-247 859.4 672 65.3
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 2.4e-246 855.9 741 60.7
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 3.2e-246 855.5 726 61.4
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 3.2e-246 855.5 633 68.1
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 7.0e-246 854.4 698 63.3
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 2.7e-245 852.4 698 62.8
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 3.9e-244 848.6 807 56.8
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 2.5e-243 845.9 791 57.1
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 2.3e-241 839.3 807 56.4
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 8.9e-241 837.4 780 59.1
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 4.4e-240 835.1 567 72.0
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 6.4e-239 831.2 795 58.9
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 6.4e-239 831.2 780 58.1
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 5.4e-238 828.2 772 60.2
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 9.5e-235 817.4 785 56.7
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.8e-234 815.8 776 56.4
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 4.7e-234 815.1 783 56.8
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 1.5e-232 810.1 742 57.5
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 3.4e-232 808.9 849 55.8
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 8.3e-231 804.3 684 62.1
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.9e-230 803.1 778 55.7
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 2.1e-229 799.7 672 62.6
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 6.0e-229 798.1 780 55.0
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 1.0e-228 797.3 759 57.3
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.7e-228 796.6 616 63.6
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 3.0e-228 795.8 675 62.1
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 4.3e-227 792.0 893 51.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 3.6e-226 788.9 765 56.1
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 2.4e-225 786.2 705 60.6
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 5.2e-225 785.0 786 54.3
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 3.8e-223 778.9 781 53.9
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.1e-222 777.3 781 54.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.9e-222 776.5 674 61.0
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 7.8e-221 771.2 721 58.0
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 1.1e-219 767.3 898 49.6
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 4.3e-219 765.4 773 53.6
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 3.6e-218 762.3 667 60.6
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 9.0e-217 757.7 866 50.5
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 7.6e-216 754.6 728 57.6
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.3e-212 743.8 599 61.8
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.6e-212 741.5 695 60.4
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 1.9e-211 740.0 663 56.9
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 3.6e-210 735.7 576 65.6
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.1e-209 734.2 665 58.3
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 4.5e-208 728.8 691 57.2
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.7e-207 726.9 807 51.4
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.4e-206 723.8 705 56.0
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 8.7e-204 714.5 729 53.4
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.5e-203 713.0 621 57.5
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.8e-202 708.8 639 57.0
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.8e-194 682.9 540 68.7
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 2.8e-194 682.9 740 51.4
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.9e-190 670.2 679 53.0
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 4.6e-189 665.6 716 50.8
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 5.7e-187 658.7 645 55.8
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 9.7e-187 657.9 669 52.8
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 4.8e-186 655.6 660 51.8
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 3.0e-180 636.3 612 56.7
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 5.1e-180 635.6 852 44.7
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 8.2e-178 628.2 753 48.6
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 2.7e-173 613.2 556 58.6
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.3e-171 606.3 823 45.6
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.2e-167 593.6 413 72.2
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 6.1e-165 585.5 634 48.9
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.8e-164 583.9 746 43.6
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 4.2e-158 562.8 786 43.9
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 1.4e-153 547.7 443 66.8
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 6.8e-148 528.9 400 66.0
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 1.2e-144 518.1 722 46.1
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 6.6e-143 512.3 426 62.9
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 3.3e-142 510.0 674 43.0
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 9.2e-137 491.9 746 40.9
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 6.1e-133 479.2 553 53.5
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 3.4e-131 473.4 349 67.3
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.4e-130 469.2 328 68.0
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 2.9e-122 443.7 334 67.1
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.4e-121 439.5 355 63.7
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 9.2e-121 438.7 314 66.9
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 9.6e-110 402.1 510 44.1
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.4e-100 370.9 508 46.7
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 9.9e-99 365.5 510 42.4
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.3e-98 365.2 532 38.9
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 2.4e-97 360.9 468 42.1
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.3e-93 348.6 377 51.2
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 5.1e-87 326.6 304 59.2
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 2.6e-83 314.3 325 54.5
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 5.1e-79 300.1 756 31.5
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 2.0e-75 288.1 695 30.2
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 6.7e-71 273.1 370 47.0
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.8e-68 265.0 228 59.6
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 3.1e-68 264.2 156 80.8
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 3.4e-67 260.8 175 74.9
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.1e-60 237.3 147 75.5
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 9.1e-60 236.1 367 41.4
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.7e-58 231.9 237 49.8
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.7e-58 231.9 202 63.4
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 6.5e-58 229.9 333 43.8
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 1.6e-56 225.3 288 44.1
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 2.7e-56 224.6 147 72.1
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 7.9e-56 223.0 135 77.0
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.7e-53 215.3 207 54.1
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.7e-53 214.2 195 56.4
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 3.1e-52 211.1 247 51.0
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.2e-51 209.1 275 50.2
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-49 202.6 293 44.7
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 8.0e-48 196.4 335 41.5
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.8e-44 185.3 290 44.1
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.8e-37 161.4 116 69.0
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 4.5e-35 154.1 290 37.2
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.7e-35 153.3 92 80.4
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.7e-34 152.1 84 86.9
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.5e-30 136.7 108 66.7
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.8e-29 134.8 85 70.6
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 1.1e-28 132.9 83 72.3
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.5e-25 122.5 86 67.4
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.3e-25 120.9 100 62.0
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 9.5e-25 119.8 105 59.0
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-23 114.8 70 78.6
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 5.2e-23 114.0 70 75.7
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 8.6e-18 96.7 96 56.2
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.6e-16 92.4 83 61.4
Cpa.g.sc86.29 Carica papaya HOM05D000751 ORTHO05D005618 4.1e-12 77.8 131 45.8
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.8e-11 73.6 97 44.3
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 6.2e-08 63.9 104 36.5
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 4.0e-07 61.2 104 37.5


User provided reference genes

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