Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 8.4e-82 307.0 157 100.0
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 1.8e-55 219.5 150 75.3
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 5.0e-50 201.4 153 70.6
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 9.4e-49 197.2 157 66.2
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 6.1e-48 194.5 153 68.0
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 7.9e-48 194.1 155 69.0
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 1.0e-47 193.7 149 67.8
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.8e-47 193.0 152 71.1
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.3e-47 192.6 130 76.2
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 3.0e-47 192.2 143 70.6
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 8.8e-47 190.7 154 69.5
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.1e-46 190.3 139 69.8
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.5e-46 189.9 158 68.4
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 3.3e-46 188.7 151 68.9
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 3.3e-46 188.7 161 67.1
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 5.7e-46 188.0 157 64.3
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 1.3e-45 186.8 157 68.8
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.3e-45 186.8 141 67.4
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 1.7e-45 186.4 150 68.0
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 1.7e-45 186.4 137 72.3
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 2.2e-45 186.0 159 67.3
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 2.2e-45 186.0 162 65.4
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 2.8e-45 185.7 157 65.6
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 8.2e-45 184.1 117 80.3
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.1e-44 183.7 120 79.2
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 1.4e-44 183.3 159 67.3
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 1.4e-44 183.3 161 66.5
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 1.8e-44 183.0 129 72.9
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 1.8e-44 183.0 154 66.9
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 4.1e-44 181.8 154 64.3
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 5.3e-44 181.4 155 65.8
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 5.3e-44 181.4 154 64.3
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 9.1e-44 180.6 123 74.8
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 1.2e-43 180.3 130 72.3
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 1.5e-43 179.9 154 64.9
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 2.0e-43 179.5 152 63.2
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 2.6e-43 179.1 158 63.3
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 2.6e-43 179.1 143 68.5
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 3.4e-43 178.7 161 63.4
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 3.4e-43 178.7 153 63.4
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.4e-43 178.7 116 78.4
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 3.4e-43 178.7 158 62.7
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 4.5e-43 178.3 144 68.1
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 4.5e-43 178.3 116 77.6
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 5.9e-43 177.9 129 69.8
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 7.7e-43 177.6 144 68.1
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 1.0e-42 177.2 153 64.1
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 1.3e-42 176.8 148 64.9
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.2e-42 176.0 116 77.6
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.2e-42 176.0 152 63.8
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 2.2e-42 176.0 158 63.3
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.9e-42 175.6 158 62.7
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.9e-42 175.6 117 77.8
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 3.8e-42 175.3 117 76.9
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 3.8e-42 175.3 123 72.4
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 5.0e-42 174.9 152 66.4
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 6.5e-42 174.5 158 65.2
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 6.5e-42 174.5 123 71.5
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 8.5e-42 174.1 153 62.7
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 1.1e-41 173.7 153 66.0
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.4e-41 173.3 116 77.6
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 1.9e-41 172.9 156 65.4
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.9e-41 172.9 116 76.7
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.9e-41 172.9 144 65.3
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 1.9e-41 172.9 132 68.9
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 1.9e-41 172.9 153 62.1
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.5e-41 172.6 147 66.0
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 3.2e-41 172.2 118 76.3
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 3.2e-41 172.2 118 77.1
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 3.2e-41 172.2 158 61.4
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 3.2e-41 172.2 118 76.3
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 4.2e-41 171.8 130 71.5
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.2e-41 171.8 116 76.7
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 5.5e-41 171.4 156 64.7
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 5.5e-41 171.4 118 75.4
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 9.4e-41 170.6 158 64.6
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 2.7e-40 169.1 156 60.3
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 2.7e-40 169.1 173 57.2
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.7e-40 169.1 156 64.7
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 2.7e-40 169.1 150 60.0
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 3.6e-40 168.7 156 64.1
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 3.6e-40 168.7 153 64.1
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 4.7e-40 168.3 118 75.4
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 4.7e-40 168.3 118 75.4
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 4.7e-40 168.3 118 74.6
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 7.9e-40 167.5 117 73.5
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 7.9e-40 167.5 118 73.7
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 1.0e-39 167.2 118 74.6
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 1.0e-39 167.2 156 62.8
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.0e-39 167.2 116 75.0
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.4e-39 166.8 118 74.6
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 1.8e-39 166.4 117 73.5
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.3e-39 166.0 117 74.4
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.0e-39 165.6 156 61.5
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 5.2e-39 164.9 158 60.8
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.5e-38 163.3 153 59.5
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 1.5e-38 163.3 156 62.8
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 3.3e-38 162.2 117 70.9
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 9.7e-38 160.6 117 72.6
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.3e-37 160.2 156 58.3
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.7e-37 159.8 152 59.9
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 2.2e-37 159.5 119 73.1
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 5.3e-36 154.8 156 57.1
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 7.0e-36 154.5 118 69.5
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 4.5e-35 151.8 159 57.9
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 7.7e-35 151.0 141 58.2
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.0e-34 150.6 76 94.7
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 2.9e-34 149.1 124 63.7
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 6.5e-34 147.9 117 69.2
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 8.5e-34 147.5 156 55.8
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 1.5e-33 146.7 92 80.4
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 3.2e-33 145.6 116 66.4
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 6.7e-31 137.9 77 84.4
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 3.3e-30 135.6 80 81.2
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 9.7e-30 134.0 82 80.5
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.3e-29 133.7 112 62.5
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 7.7e-27 124.4 88 68.2
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.0e-26 124.0 121 57.9
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.5e-25 119.4 98 62.2
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 7.2e-25 117.9 118 59.3
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 4.7e-24 115.2 97 60.8
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 1.5e-22 110.2 77 67.5
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 6.3e-21 104.8 75 64.0
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 4.1e-20 102.1 80 63.8
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 4.2e-17 92.0 78 57.7
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 2.1e-16 89.7 76 59.2
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.4e-07 60.5 34 85.3
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 5.8e-06 55.1 65 43.1


User provided reference genes

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