Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 4.3e-30 134.0 70 100.0
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 4.1e-20 100.9 69 75.4
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 5.9e-19 97.1 64 78.1
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.2e-18 95.1 64 78.1
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 2.2e-18 95.1 68 72.1
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 8.5e-18 93.2 65 72.3
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 2.5e-17 91.7 65 70.8
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 3.2e-17 91.3 65 73.8
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 3.2e-17 91.3 64 75.0
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 4.2e-17 90.9 69 68.1
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 4.2e-17 90.9 65 72.3
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 4.2e-17 90.9 65 73.8
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 5.5e-17 90.5 69 66.7
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 5.5e-17 90.5 64 73.4
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.2e-16 89.4 65 72.3
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 1.2e-16 89.4 65 72.3
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 2.7e-16 88.2 64 71.9
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 4.7e-16 87.4 65 70.8
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 4.7e-16 87.4 64 71.9
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 4.7e-16 87.4 67 67.2
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 6.1e-16 87.0 69 65.2
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 2.3e-15 85.1 64 71.9
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.3e-15 85.1 64 71.9
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 3.0e-15 84.7 64 70.3
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 3.9e-15 84.3 64 68.8
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 5.2e-15 84.0 65 67.7
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.2e-15 84.0 64 71.9
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 5.2e-15 84.0 63 68.3
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 8.8e-15 83.2 68 66.2
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 1.1e-14 82.8 64 68.8
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.6e-14 81.6 65 66.2
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 3.3e-14 81.3 65 64.6
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 5.7e-14 80.5 64 65.6
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 7.4e-14 80.1 65 64.6
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 9.7e-14 79.7 69 58.0
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 9.7e-14 79.7 69 58.0
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 9.7e-14 79.7 65 66.2
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 9.7e-14 79.7 64 71.9
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.3e-13 79.3 63 68.3
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.7e-13 79.0 64 65.6
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 1.7e-13 79.0 65 63.1
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.7e-13 79.0 64 65.6
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.7e-13 79.0 65 64.6
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 2.2e-13 78.6 65 63.1
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 2.2e-13 78.6 65 63.1
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 2.2e-13 78.6 64 67.2
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 2.8e-13 78.2 64 67.2
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 3.7e-13 77.8 65 64.6
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 3.7e-13 77.8 65 63.1
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 6.3e-13 77.0 64 64.1
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 4.1e-12 74.3 63 63.5
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 5.3e-12 73.9 64 65.6
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 1.6e-11 72.4 64 60.9
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 2.0e-11 72.0 63 65.1
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 3.8e-10 67.8 61 54.1
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 1.1e-09 66.2 62 53.2
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.2e-09 64.3 53 66.0
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 6.1e-08 60.5 60 48.3
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.0e-07 59.7 65 38.5
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 5.2e-07 57.4 42 69.0
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 3.3e-06 54.7 53 56.6
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 5.7e-06 53.9 53 60.4


User provided reference genes

Program Settings