Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 1.7e-67 259.2 136 100.0
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 2.6e-55 218.8 136 83.8
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 5.1e-51 204.5 128 80.5
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 5.6e-50 201.1 136 77.2
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 1.5e-47 193.0 136 72.1
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 2.4e-45 185.7 135 70.4
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 1.3e-43 179.9 136 66.9
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 3.0e-43 178.7 136 66.9
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 1.9e-42 176.0 134 70.1
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 5.6e-42 174.5 134 64.9
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 7.4e-42 174.1 133 64.7
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 7.4e-42 174.1 136 64.7
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 1.3e-41 173.3 134 65.7
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 1.6e-41 172.9 134 64.2
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 2.8e-41 172.2 136 64.0
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 3.7e-41 171.8 137 63.5
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 1.4e-40 169.9 139 65.5
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 2.4e-40 169.1 141 63.1
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 2.4e-40 169.1 135 63.7
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 3.1e-40 168.7 137 65.0
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 5.3e-40 167.9 135 62.2
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 5.3e-40 167.9 132 68.2
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 5.3e-40 167.9 132 68.2
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 2.0e-39 166.0 134 64.2
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.0e-39 166.0 134 64.9
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.6e-39 165.6 134 64.2
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.6e-39 165.6 134 64.2
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 5.8e-39 164.5 131 64.9
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.8e-39 164.5 134 63.4
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 7.6e-39 164.1 134 60.4
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 9.9e-39 163.7 136 60.3
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 9.9e-39 163.7 134 63.4
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 1.3e-38 163.3 135 65.2
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 1.7e-38 162.9 134 64.2
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 2.9e-38 162.2 130 65.4
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 3.8e-38 161.8 133 60.2
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 3.8e-38 161.8 133 60.2
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 4.9e-38 161.4 136 60.3
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 4.9e-38 161.4 128 68.0
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 8.4e-38 160.6 134 62.7
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 1.1e-37 160.2 137 60.6
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.1e-37 160.2 122 65.6
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 1.4e-37 159.8 139 61.9
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.4e-37 159.8 136 61.8
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.4e-37 159.8 134 60.4
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.4e-37 159.8 134 60.4
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 1.9e-37 159.5 136 60.3
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.9e-37 159.5 111 71.2
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 1.9e-37 159.5 134 65.7
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 2.4e-37 159.1 138 60.1
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 2.4e-37 159.1 128 68.0
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.4e-37 159.1 135 61.5
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 3.2e-37 158.7 136 61.0
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 3.2e-37 158.7 122 66.4
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 4.2e-37 158.3 137 59.1
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 4.2e-37 158.3 136 62.5
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 7.1e-37 157.5 130 63.1
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 2.1e-36 156.0 129 62.8
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 2.7e-36 155.6 121 64.5
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 2.7e-36 155.6 134 59.7
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 3.5e-36 155.2 136 59.6
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 4.6e-36 154.8 136 62.5
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 4.6e-36 154.8 136 60.3
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 4.6e-36 154.8 136 60.3
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 6.0e-36 154.5 122 64.8
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 7.9e-36 154.1 136 60.3
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.3e-35 152.5 129 62.0
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 2.3e-35 152.5 124 62.9
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 2.3e-35 152.5 133 62.4
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.0e-35 152.1 134 61.9
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 3.0e-35 152.1 120 65.8
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 3.9e-35 151.8 135 61.5
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 6.7e-35 151.0 136 57.4
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 8.7e-35 150.6 137 58.4
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 8.7e-35 150.6 134 59.7
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 1.1e-34 150.2 134 60.4
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 2.5e-34 149.1 127 66.9
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 2.1e-33 146.0 125 61.6
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 2.1e-33 146.0 119 60.5
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 4.8e-33 144.8 130 59.2
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 4.8e-33 144.8 130 63.1
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.1e-32 143.7 127 58.3
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.1e-32 143.7 137 56.9
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 9.0e-32 140.6 133 57.1
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.2e-31 140.2 118 61.0
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 7.6e-31 137.5 118 60.2
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 1.9e-29 132.9 116 56.9
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 4.2e-29 131.7 128 57.0
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 7.1e-29 131.0 131 55.7
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 2.7e-28 129.0 131 51.9
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.1e-26 123.6 105 57.1
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 9.7e-26 120.6 104 62.5
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 2.2e-25 119.4 122 53.3
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 3.7e-25 118.6 108 58.3
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.4e-24 116.7 124 55.6
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 2.4e-24 115.9 116 56.9
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 1.5e-23 113.2 128 47.7
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 1.7e-22 109.8 127 46.5
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 5.1e-19 98.2 130 41.5
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 3.3e-18 95.5 128 43.8
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.1e-10 70.5 51 72.5
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.8e-08 63.2 70 54.3
MBI08_g43574_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 7.0e-08 61.2 62 50.0


User provided reference genes

Program Settings