Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.3e-85 319.7 165 100.0
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.9e-84 315.8 165 98.8
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.1e-52 210.3 164 67.7
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.1e-52 210.3 159 69.2
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 2.6e-49 199.1 160 60.6
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.7e-48 196.4 148 64.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 2.2e-48 196.1 166 59.0
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 4.1e-47 191.8 163 61.3
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 4.1e-47 191.8 165 58.2
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.6e-46 189.9 158 60.1
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 4.6e-46 188.3 160 58.8
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.0e-45 187.2 160 60.6
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.7e-45 186.4 159 56.6
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 3.0e-45 185.7 164 56.1
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 3.0e-45 185.7 164 59.1
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 3.0e-45 185.7 165 57.0
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 8.6e-45 184.1 154 60.4
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.6e-45 184.1 158 59.5
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 1.1e-44 183.7 160 59.4
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.5e-44 183.3 148 62.2
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 2.5e-44 182.6 161 57.8
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 3.3e-44 182.2 166 57.8
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 4.3e-44 181.8 154 60.4
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.2e-43 180.3 165 57.0
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.2e-43 180.3 163 53.4
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 2.1e-43 179.5 164 55.5
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.8e-43 179.1 158 57.0
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 2.8e-43 179.1 162 54.9
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.6e-43 178.7 154 59.1
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.6e-43 178.7 143 61.5
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 4.7e-43 178.3 159 60.4
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 4.7e-43 178.3 159 60.4
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 8.1e-43 177.6 160 58.8
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 8.1e-43 177.6 153 56.2
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.1e-42 177.2 155 60.6
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.8e-42 176.4 163 57.7
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 1.8e-42 176.4 165 55.2
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 2.3e-42 176.0 163 54.0
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.3e-42 176.0 159 54.7
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 2.3e-42 176.0 162 54.3
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 3.1e-42 175.6 144 59.7
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 4.0e-42 175.3 159 56.0
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 4.0e-42 175.3 158 55.7
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.2e-41 173.7 162 56.8
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 1.5e-41 173.3 167 53.3
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.5e-41 173.3 167 51.5
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.0e-41 172.9 164 57.9
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 3.4e-41 172.2 159 56.0
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 5.8e-41 171.4 162 53.7
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 5.8e-41 171.4 140 57.9
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 7.6e-41 171.0 163 54.6
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 2.2e-40 169.5 157 56.7
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.9e-40 169.1 164 56.7
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 3.8e-40 168.7 159 55.3
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 4.9e-40 168.3 164 54.3
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.1e-39 167.2 140 57.9
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 1.9e-39 166.4 163 54.0
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 4.1e-39 165.2 152 54.6
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 4.1e-39 165.2 133 57.1
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 4.1e-39 165.2 150 56.7
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 5.4e-39 164.9 149 55.0
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 7.1e-39 164.5 167 50.9
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 7.1e-39 164.5 167 53.3
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.2e-38 163.7 158 52.5
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 1.2e-38 163.7 162 52.5
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 2.1e-38 162.9 161 47.8
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 2.1e-38 162.9 146 53.4
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 4.6e-38 161.8 149 55.0
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.6e-38 161.8 171 48.0
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 7.8e-38 161.0 146 56.2
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 7.8e-38 161.0 156 56.4
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 3.0e-37 159.1 167 53.9
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 3.0e-37 159.1 167 52.1
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 3.9e-37 158.7 144 54.9
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 3.9e-37 158.7 146 56.2
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 3.9e-37 158.7 140 57.1
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 5.1e-37 158.3 161 52.2
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.1e-36 157.1 134 55.2
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.1e-36 157.1 161 51.6
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.5e-36 156.8 161 50.9
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.5e-36 156.8 161 52.2
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.5e-36 156.8 132 57.6
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 1.9e-36 156.4 156 53.2
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 3.3e-36 155.6 166 51.8
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 3.3e-36 155.6 154 51.9
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 4.3e-36 155.2 156 50.0
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 7.3e-36 154.5 161 50.3
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 7.3e-36 154.5 164 50.0
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 9.6e-36 154.1 161 52.2
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 2.1e-35 152.9 158 50.0
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 4.7e-35 151.8 143 53.8
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.8e-34 149.8 167 50.3
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 1.8e-34 149.8 151 51.7
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.4e-34 149.4 161 49.7
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 5.2e-34 148.3 171 48.5
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 6.9e-34 147.9 160 50.0
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 8.9e-34 147.5 129 59.7
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 3.4e-33 145.6 159 49.7
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.3e-32 143.7 151 49.7
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 1.7e-32 143.3 137 51.8
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 2.4e-31 139.4 126 58.7
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 2.4e-31 139.4 126 57.9
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.4e-31 139.4 111 61.3
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.0e-30 134.8 116 60.3
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 7.8e-30 134.4 129 55.8
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 7.8e-30 134.4 140 49.3
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 3.0e-29 132.5 147 48.3
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 5.1e-29 131.7 159 45.3
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 3.3e-28 129.0 171 42.1
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 4.3e-28 128.6 128 53.9
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 2.2e-24 116.3 144 46.5
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 2.9e-24 115.9 138 39.9
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 3.2e-23 112.5 159 38.4
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 2.3e-21 106.3 77 63.6
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 3.3e-20 102.4 139 41.0
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.3e-19 100.5 131 42.0
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 1.6e-19 100.1 151 36.4
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 8.1e-19 97.8 90 54.4
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 7.6e-17 91.3 119 42.0
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 9.9e-17 90.9 90 54.4
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 2.4e-15 86.3 125 40.0
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.6e-14 83.6 148 35.8
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 4.6e-14 82.0 151 33.1
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 3.3e-12 75.9 133 34.6
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.4e-10 69.7 63 55.6
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 6.9e-10 68.2 90 46.7
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.5e-09 67.0 88 40.9
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 3.4e-09 65.9 75 46.7
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 5.8e-09 65.1 72 51.4


User provided reference genes

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