Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3359 Trochodendron aralioides HOM05D005197 ORTHO05D006263 4.4e-56 221.1 113 100.0
TAR629G2553 Trochodendron aralioides HOM05D005197 ORTHO05D006263 8.6e-28 127.1 106 55.7
CiPaw.11G075300 Carya illinoinensis HOM05D005197 ORTHO05D006263 1.4e-25 119.8 109 57.8
QL12p002196 Quercus lobata HOM05D005197 ORTHO05D006263 6.8e-25 117.5 108 55.6
Nn3g19194 Nelumbo nucifera HOM05D005197 ORTHO05D006263 1.5e-24 116.3 103 56.3
Nn3g19195 Nelumbo nucifera HOM05D005197 ORTHO05D006263 2.2e-23 112.5 100 54.0
Glyma.01G151000 Glycine max HOM05D005197 ORTHO05D006263 6.4e-23 110.9 106 54.7
Haze_08011 Corylus avellana HOM05D005197 ORTHO05D006263 1.4e-22 109.8 101 58.4
Nn1g09229 Nelumbo nucifera HOM05D005197 ORTHO05D006263 2.4e-22 109.0 106 50.0
Glyma.09G216000 Glycine max HOM05D005197 ORTHO05D006263 5.4e-22 107.8 111 52.3
Rhsim05G0122600 Rhododendron simsii HOM05D005197 ORTHO05D006263 7.0e-22 107.5 107 57.0
Cfa012647 Carpinus fangiana HOM05D005197 ORTHO05D006263 9.2e-22 107.1 101 56.4
Lalb_Chr05g0215321 Lupinus albus HOM05D005197 ORTHO05D006263 1.6e-21 106.3 109 52.3
TWI60G1368 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 3.5e-21 105.1 106 50.0
CiPaw.10G109500 Carya illinoinensis HOM05D005197 ORTHO05D006263 4.6e-21 104.8 101 53.5
CAN.G22.3 Capsicum annuum HOM05D005197 ORTHO05D006263 1.0e-20 103.6 98 55.1
TWI32G0688 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 1.0e-20 103.6 107 46.7
Oeu057151.1 Olea europaea HOM05D005197 ORTHO05D006263 2.3e-20 102.4 105 50.5
SalBow8G0134 Salvia bowleyana HOM05D005197 ORTHO05D006263 3.0e-20 102.1 104 51.0
SalBow8G0427 Salvia bowleyana HOM05D005197 ORTHO05D006263 3.0e-20 102.1 104 51.0
Sopen07g029250 Solanum pennellii HOM05D005197 ORTHO05D006263 3.9e-20 101.7 105 51.4
CsaV3_4G006970 Cucumis sativus L. HOM05D005197 ORTHO05D006263 5.0e-20 101.3 103 51.5
PGSC0003DMG400041236 Solanum tuberosum HOM05D005197 ORTHO05D006263 5.0e-20 101.3 102 53.9
ClCG07G011270 Citrullus lanatus HOM05D005197 ORTHO05D006263 6.6e-20 100.9 102 52.9
Psat2g143800 Pisum sativum HOM05D005197 ORTHO05D006263 6.6e-20 100.9 104 53.8
Cfa012646 Carpinus fangiana HOM05D005197 ORTHO05D006263 8.6e-20 100.5 107 57.0
Peaxi162Scf00445g00001 Petunia axillaris HOM05D005197 ORTHO05D006263 2.5e-19 99.0 102 52.9
Haze_08012 Corylus avellana HOM05D005197 ORTHO05D006263 3.3e-19 98.6 104 55.8
ATR0369G001 Amborella trichopoda HOM05D005197 ORTHO05D006263 4.3e-19 98.2 115 51.3
MELO3C016247.2 Cucumis melo HOM05D005197 ORTHO05D006263 4.3e-19 98.2 103 50.5
Haze_08014 Corylus avellana HOM05D005197 ORTHO05D006263 7.3e-19 97.4 104 54.8
Lj2g0019897 Lotus japonicus HOM05D005197 ORTHO05D006263 7.3e-19 97.4 105 52.4
Medtr5g026380 Medicago truncatula HOM05D005197 ORTHO05D006263 9.5e-19 97.1 94 57.4
MSTRG.13922 Avicennia marina HOM05D005197 ORTHO05D006263 1.2e-18 96.7 104 48.1
vmacro19764 Vaccinium macrocarpon HOM05D005197 ORTHO05D006263 1.2e-18 96.7 107 55.1
Cc00_g01150 Coffea canephora HOM05D005197 ORTHO05D006263 1.6e-18 96.3 105 46.7
Nitab4.5_0004181g0010 Nicotiana tabacum HOM05D005197 ORTHO05D006263 1.6e-18 96.3 103 51.5
RcHm_v2.0_Chr7g0214771 Rosa chinensis HOM05D005197 ORTHO05D006263 3.6e-18 95.1 104 51.0
Potri.001G128600 Populus trichocarpa HOM05D005197 ORTHO05D006263 4.7e-18 94.7 108 51.9
PGR042G3936 Punica granatum HOM05D005197 ORTHO05D006263 6.2e-18 94.4 109 50.5
Sed0006364 Sechium edule HOM05D005197 ORTHO05D006263 8.0e-18 94.0 103 47.6
FAN13G2818 Fragaria x ananassa HOM05D005197 ORTHO05D006263 1.4e-17 93.2 105 48.6
Phvul.002G124800 Phaseolus vulgaris HOM05D005197 ORTHO05D006263 2.3e-17 92.4 92 55.4
Nitab4.5_0000183g0040 Nicotiana tabacum HOM05D005197 ORTHO05D006263 3.1e-17 92.0 106 50.0
SGA_v2.0_scaffold121G33048 Striga asiatica HOM05D005197 ORTHO05D006263 3.1e-17 92.0 104 50.0
VMungo1215G1205 Vigna mungo HOM05D005197 ORTHO05D006263 3.1e-17 92.0 90 51.1
arahy.Tifrunner.gnm1.ann1.11I9TD Arachis hypogaea HOM05D005197 ORTHO05D006263 6.8e-17 90.9 95 54.7
arahy.Tifrunner.gnm1.ann1.CK7EWS Arachis hypogaea HOM05D005197 ORTHO05D006263 6.8e-17 90.9 95 54.7
Lj8A379T44 Lonicera japonica HOM05D005197 ORTHO05D006263 1.2e-16 90.1 102 50.0
TPR.G36193 Trifolium pratense HOM05D005197 ORTHO05D006263 2.0e-16 89.4 94 54.3
MD16G1288300 Malus domestica HOM05D005197 ORTHO05D006263 2.6e-16 89.0 103 49.5
Actinidia25715 Actinidia chinensis HOM05D005197 ORTHO05D006263 3.4e-16 88.6 65 69.2
Manes.17G005300 Manihot esculenta HOM05D005197 ORTHO05D006263 3.4e-16 88.6 107 50.5
DCAR_030955 Daucus carota HOM05D005197 ORTHO05D006263 4.4e-16 88.2 104 48.1
FAN04G2949 Fragaria x ananassa HOM05D005197 ORTHO05D006263 4.4e-16 88.2 105 46.7
TPR.G17242 Trifolium pratense HOM05D005197 ORTHO05D006263 4.4e-16 88.2 95 53.7
Phvul.002G124900 Phaseolus vulgaris HOM05D005197 ORTHO05D006263 5.8e-16 87.8 99 53.5
MBI04_g30782_MAGBIO Magnolia biondii HOM05D005197 ORTHO05D006263 1.3e-15 86.7 75 60.0
Actinidia25714 Actinidia chinensis HOM05D005197 ORTHO05D006263 1.7e-15 86.3 101 47.5
FAN08G2611 Fragaria x ananassa HOM05D005197 ORTHO05D006263 1.7e-15 86.3 104 46.2
FvH4_5g24380 Fragaria vesca HOM05D005197 ORTHO05D006263 2.2e-15 85.9 96 50.0
Atru.chr6.2120 Acer truncatum HOM05D005197 ORTHO05D006263 2.9e-15 85.5 100 51.0
FAN18G1897 Fragaria x ananassa HOM05D005197 ORTHO05D006263 2.9e-15 85.5 95 50.5
Duzib084G1118 Durio zibethinus HOM05D005197 ORTHO05D006263 6.4e-15 84.3 109 45.0
VMungo1215G2329 Vigna mungo HOM05D005197 ORTHO05D006263 6.4e-15 84.3 99 51.5
Migut.E01390 Erythranthe guttata HOM05D005197 ORTHO05D006263 8.3e-15 84.0 105 46.7
Ciclev10002053m.g Citrus clementina HOM05D005197 ORTHO05D006263 1.1e-14 83.6 102 47.1
CANSAT01G1003 Cannabis sativa HOM05D005197 ORTHO05D006263 1.4e-14 83.2 96 46.9
TPR.G902 Trifolium pratense HOM05D005197 ORTHO05D006263 1.4e-14 83.2 83 59.0
Solyc07g055880.1 Solanum lycopersicum HOM05D005197 ORTHO05D006263 1.9e-14 82.8 68 60.3
QL12p002187 Quercus lobata HOM05D005197 ORTHO05D006263 3.2e-14 82.0 106 48.1
Lj2g0023539 Lotus japonicus HOM05D005197 ORTHO05D006263 5.4e-14 81.3 101 48.5
Cpa.g.sc305.1 Carica papaya HOM05D005197 ORTHO05D006263 1.6e-13 79.7 106 43.4
Thecc.03G323400 Theobroma cacao HOM05D005197 ORTHO05D006263 2.0e-13 79.3 97 47.4
Lsat_1_v5_gn_6_15401 Lactuca sativa HOM05D005197 ORTHO05D006263 2.7e-13 79.0 111 46.8
Prupe.5G017000 Prunus persica HOM05D005197 ORTHO05D006263 4.6e-13 78.2 104 48.1
arahy.Tifrunner.gnm1.ann1.G7W534 Arachis hypogaea HOM05D005197 ORTHO05D006263 6.0e-13 77.8 89 48.3
arahy.Tifrunner.gnm1.ann1.JB60CZ Arachis hypogaea HOM05D005197 ORTHO05D006263 6.0e-13 77.8 89 48.3
EL10Ac5g11882 Beta vulgaris HOM05D005197 ORTHO05D006263 1.0e-12 77.0 86 46.5
Eucgr.E01174 Eucalyptus grandis HOM05D005197 ORTHO05D006263 1.3e-12 76.6 96 45.8
Ca_25075_v3 Cicer arietinum L. HOM05D005197 ORTHO05D006263 1.7e-12 76.3 101 47.5
Ah.12g056120 Amaranthus hybridus HOM05D005197 ORTHO05D006263 6.6e-12 74.3 86 47.7
Glyma.09G215900 Glycine max HOM05D005197 ORTHO05D006263 6.6e-12 74.3 90 48.9
Lalb_Chr16g0380581 Lupinus albus HOM05D005197 ORTHO05D006263 6.6e-12 74.3 101 44.6
Eucgr.E01175 Eucalyptus grandis HOM05D012124 ORTHO05D006263 8.6e-12 73.9 76 51.3
Psat2g143520 Pisum sativum HOM05D005197 ORTHO05D006263 8.6e-12 73.9 102 48.0
TPR.G17269 Trifolium pratense HOM05D005197 ORTHO05D006263 4.3e-11 71.6 103 47.6
Medtr5g026390 Medicago truncatula HOM05D005197 ORTHO05D006263 9.5e-11 70.5 99 47.5
SEGI_24603 Sequoiadendron giganteum HOM05D005197 ORTHO05D006263 1.6e-10 69.7 129 38.0
Os06g0710900 Oryza sativa ssp. japonica HOM05D005197 ORTHO05D006263 2.8e-10 68.9 115 42.6
COL.COLO4_16714 Corchorus olitorius HOM05D005197 ORTHO05D006263 4.7e-10 68.2 86 45.3
Glyma.01G150900 Glycine max HOM05D005197 ORTHO05D006263 1.8e-09 66.2 64 57.8
HPP92_022730 Vanilla planifolia HOM05D005197 ORTHO05D006263 5.2e-09 64.7 101 38.6
Sc22g0002200 Simmondsia chinensis HOM05D005197 ORTHO05D006263 8.9e-09 63.9 99 42.4
PSO782G4627 Papaver somniferum HOM05D005197 ORTHO05D006263 1.2e-08 63.5 101 34.7
CDE11G1044 Ceratophyllum demersum HOM05D005197 ORTHO05D006263 2.6e-08 62.4 92 43.5
Sabra01G0098900 Salix brachista HOM05D005197 ORTHO05D006263 2.6e-08 62.4 106 35.8
THA.LOC104824415 Tarenaya hassleriana HOM05D012124 ORTHO05D014419 3.4e-08 62.0 82 45.1
ECA232G2780 Erigeron canadensis HOM05D005197 ORTHO05D006263 1.3e-07 60.1 98 45.9
TPR.G36141 Trifolium pratense HOM05D005197 ORTHO05D006263 1.7e-07 59.7 70 54.3
Zm00001eb227690 Zea mays HOM05D005197 ORTHO05D006263 2.2e-07 59.3 106 40.6
ECA233G2979 Erigeron canadensis HOM05D005197 ORTHO05D006263 2.9e-07 58.9 100 42.0
HanXRQChr17g0539691 Helianthus annuus HOM05D005197 ORTHO05D006263 3.7e-07 58.5 86 44.2
CARHR136460 Cardamine hirsuta HOM05D012124 ORTHO05D014419 1.4e-06 56.6 59 55.9
Sp4g23640 Schrenkiella parvula HOM05D012124 ORTHO05D014419 3.2e-06 55.5 55 60.0
A03p23230 Brassica napus HOM05D012124 ORTHO05D014419 4.1e-06 55.1 49 61.2
C03p27730 Brassica napus HOM05D012124 ORTHO05D014419 4.1e-06 55.1 49 61.2
BraA03t11542Z Brassica rapa HOM05D012124 ORTHO05D014419 4.1e-06 55.1 49 61.2
Thhalv10017494m.g Eutrema salsugineum HOM05D012124 ORTHO05D014419 4.1e-06 55.1 49 61.2
BcaC01g05341 Brassica carinata HOM05D012124 ORTHO05D014419 5.4e-06 54.7 49 59.2
BolC3t15142H Brassica oleracea HOM05D012124 ORTHO05D014419 5.4e-06 54.7 49 59.2
AL4G39340 Arabidopsis lyrata HOM05D012124 ORTHO05D014419 7.1e-06 54.3 59 54.2
AT2G41342 Arabidopsis thaliana HOM05D012124 ORTHO05D014419 7.1e-06 54.3 55 56.4


User provided reference genes

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