Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 2.6e-194 681.8 329 100.0
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 8.8e-57 224.9 344 41.3
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 9.7e-56 221.5 294 42.9
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 2.7e-50 203.4 357 38.1
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 6.7e-49 198.7 355 37.5
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 2.4e-46 190.3 394 34.5
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 2.5e-43 180.3 351 35.0
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 1.5e-40 171.0 270 43.3
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 4.4e-40 169.5 291 38.8
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 7.5e-40 168.7 252 40.1
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 3.7e-39 166.4 405 32.8
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 4.1e-38 162.9 363 35.8
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 7.0e-38 162.2 360 33.6
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 9.1e-38 161.8 345 35.4
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 2.0e-37 160.6 341 35.5
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 2.7e-37 160.2 197 46.7
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 1.0e-36 158.3 366 35.0
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 3.8e-36 156.4 197 45.7
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.1e-35 154.8 344 34.6
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 3.3e-35 153.3 364 33.8
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.6e-34 151.0 294 34.7
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 3.6e-34 149.8 352 32.1
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 8.0e-34 148.7 296 36.8
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 2.3e-33 147.1 288 37.2
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 5.2e-33 146.0 355 33.5
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 1.5e-32 144.4 388 31.2
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 3.7e-31 139.8 382 31.7
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 6.3e-31 139.0 228 36.8
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 1.1e-30 138.3 351 32.2
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 3.1e-30 136.7 304 34.2
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 5.4e-30 136.0 273 34.8
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 2.5e-27 127.1 315 31.1
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 7.3e-27 125.6 198 37.9
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 7.3e-27 125.6 281 32.7
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 1.0e-25 121.7 311 32.2
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 8.9e-25 118.6 148 46.6
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 2.9e-23 113.6 253 32.8
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 2.4e-22 110.5 310 32.9
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 3.2e-22 110.2 326 32.5
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 4.1e-22 109.8 174 42.5
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 9.2e-22 108.6 342 32.5
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 2.7e-21 107.1 358 28.8
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 4.6e-21 106.3 177 36.7
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 3.9e-20 103.2 250 30.4
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 3.9e-20 103.2 139 40.3
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 8.6e-20 102.1 336 29.8
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 2.5e-19 100.5 140 40.7
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 1.2e-18 98.2 346 30.9
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 2.1e-18 97.4 358 28.5
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 2.3e-17 94.0 243 32.1
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 5.2e-17 92.8 290 31.0
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 6.8e-17 92.4 328 30.5
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 8.9e-17 92.0 250 29.6
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 8.9e-17 92.0 333 29.4
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 2.0e-16 90.9 290 31.4
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 2.0e-16 90.9 287 30.7
Nitab4.5_0001868g0030 Nicotiana tabacum HOM05D014625 ORTHO05D007630 3.4e-16 90.1 257 30.4
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 5.8e-16 89.4 188 37.2
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 9.8e-16 88.6 305 28.9
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 9.8e-16 88.6 102 48.0
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 2.9e-15 87.0 231 35.5
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 3.7e-15 86.7 217 37.3
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 4.9e-15 86.3 315 29.2
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 6.4e-15 85.9 357 28.9
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 8.3e-15 85.5 284 30.6
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 1.9e-14 84.3 290 31.0
HPP92_015425 Vanilla planifolia HOM05D007641 ORTHO05D007630 1.9e-14 84.3 192 32.3
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 4.1e-14 83.2 288 27.8
PGR102G3245 Punica granatum HOM05D007641 ORTHO05D007630 7.0e-14 82.4 152 36.8
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 9.2e-14 82.0 146 37.0
AUR62016518 Chenopodium quinoa HOM05D029401 ORTHO05D007630 1.2e-13 81.6 267 27.3
AUR62001158 Chenopodium quinoa HOM05D029401 ORTHO05D007630 2.7e-13 80.5 275 25.8
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 1.0e-12 78.6 165 35.8
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 1.7e-12 77.8 68 55.9
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 1.7e-12 77.8 353 24.4
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 3.0e-12 77.0 290 28.6
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 5.1e-12 76.3 169 36.1
PSO384G0550 Papaver somniferum HOM05D007641 ORTHO05D007630 2.5e-11 73.9 81 50.6
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 2.5e-11 73.9 220 30.0
C04p20070 Brassica napus HOM05D001940 ORTHO05D007630 2.1e-10 70.9 65 52.3
BolC4t23545H Brassica oleracea HOM05D001940 ORTHO05D007630 2.1e-10 70.9 65 52.3
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 4.7e-10 69.7 65 52.3
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 4.7e-10 69.7 52 71.2
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 6.2e-10 69.3 138 31.2
CARHR123930 Cardamine hirsuta HOM05D001940 ORTHO05D007630 3.1e-09 67.0 202 30.2
Ca_15061_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 2.6e-08 63.9 58 55.2
Nitab4.5_0000002g0280 Nicotiana tabacum HOM05D014625 ORTHO05D007630 1.3e-07 61.6 262 26.7
Zm00001eb336420 Zea mays HOM05D052079 ORTHO05D007630 3.2e-06 57.0 240 24.2


User provided reference genes

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