Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.7e-47 192.2 91 100.0
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.5e-43 179.1 91 90.1
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 9.3e-41 169.9 91 83.5
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 4.6e-40 167.5 91 81.3
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 1.8e-39 165.6 91 81.3
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 1.5e-38 162.5 91 80.2
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 2.5e-38 161.8 88 80.7
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 4.3e-38 161.0 88 79.5
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 2.1e-37 158.7 91 81.3
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 2.8e-37 158.3 86 80.2
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 2.8e-37 158.3 91 78.0
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 3.7e-37 157.9 88 79.5
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 6.2e-37 157.1 88 77.3
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 8.1e-37 156.8 91 74.7
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 1.1e-36 156.4 91 75.8
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 1.8e-36 155.6 91 75.8
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 4.0e-36 154.5 91 74.7
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 4.0e-36 154.5 88 78.4
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 4.0e-36 154.5 91 70.3
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 1.2e-35 152.9 88 73.9
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 1.2e-35 152.9 90 73.3
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 1.5e-35 152.5 88 75.0
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 1.5e-35 152.5 91 75.8
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.5e-35 152.5 92 80.4
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 1.5e-35 152.5 90 72.2
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.5e-35 152.5 88 73.9
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 2.0e-35 152.1 88 73.9
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 2.0e-35 152.1 91 74.7
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 2.0e-35 152.1 91 72.5
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 2.0e-35 152.1 88 77.3
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 2.6e-35 151.8 93 76.3
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 4.5e-35 151.0 91 74.7
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 4.5e-35 151.0 91 75.8
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 5.8e-35 150.6 91 71.4
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 9.9e-35 149.8 90 75.6
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 9.9e-35 149.8 88 72.7
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 1.3e-34 149.4 91 72.5
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 1.7e-34 149.1 87 75.9
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 1.7e-34 149.1 87 75.9
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 1.7e-34 149.1 88 76.1
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 1.7e-34 149.1 89 73.0
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.7e-34 149.1 91 71.4
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 2.2e-34 148.7 92 71.7
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 2.9e-34 148.3 82 80.5
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 3.8e-34 147.9 91 74.7
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 3.8e-34 147.9 91 71.4
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 3.8e-34 147.9 88 70.5
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 8.4e-34 146.7 91 70.3
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.1e-33 146.4 87 73.6
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.1e-33 146.4 91 70.3
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.9e-33 145.6 91 69.2
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.9e-33 145.6 91 69.2
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.4e-33 145.2 91 69.2
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 4.2e-33 144.4 89 75.3
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.5e-33 144.1 91 68.1
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 9.3e-33 143.3 89 74.2
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 1.6e-32 142.5 91 70.3
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.6e-32 142.5 91 70.3
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.6e-32 142.5 91 70.3
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.5e-32 141.4 83 72.3
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.5e-32 141.4 91 69.2
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 6.0e-32 140.6 92 70.7
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 6.0e-32 140.6 87 71.3
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 68.1
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 68.1
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 68.1
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 68.1
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 68.1
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 72.5
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 71.4
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 1.0e-31 139.8 91 68.1
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 1.0e-31 139.8 90 68.9
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 1.0e-31 139.8 88 68.2
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.3e-31 139.4 91 72.5
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.8e-31 139.0 91 67.0
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 3.0e-31 138.3 91 72.5
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 5.1e-31 137.5 91 68.1
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 5.1e-31 137.5 87 70.1
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 5.1e-31 137.5 87 70.1
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 6.7e-31 137.1 91 65.9
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 8.7e-31 136.7 91 68.1
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 1.1e-30 136.3 92 65.2
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 1.1e-30 136.3 92 65.2
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 1.5e-30 136.0 91 67.0
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 2.5e-30 135.2 91 68.1
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 2.5e-30 135.2 90 66.7
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 4.3e-30 134.4 88 65.9
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 4.3e-30 134.4 88 68.2
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 5.6e-30 134.0 91 65.9
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 5.6e-30 134.0 88 69.3
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 7.4e-30 133.7 91 65.9
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 9.6e-30 133.3 91 65.9
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 9.6e-30 133.3 91 65.9
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 9.6e-30 133.3 91 65.9
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 9.6e-30 133.3 91 65.9
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 9.6e-30 133.3 87 67.8
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 1.6e-29 132.5 87 63.2
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 2.8e-29 131.7 91 63.7
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 4.8e-29 131.0 88 64.8
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 8.2e-29 130.2 88 70.5
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 2.4e-28 128.6 88 64.8
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 6.9e-28 127.1 88 63.6
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 1.2e-27 126.3 87 63.2
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 2.6e-27 125.2 87 62.1
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 7.6e-27 123.6 88 63.6
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 1.0e-26 123.2 88 61.4
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.7e-26 122.5 87 60.9
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 3.8e-26 121.3 88 58.0
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 6.5e-26 120.6 88 59.1
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 1.4e-25 119.4 87 60.9
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.3e-25 116.7 88 58.0
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.3e-25 116.7 85 60.0
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.3e-25 116.7 88 58.0
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.3e-25 116.7 88 58.0
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.2e-24 116.3 82 59.8
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 2.1e-24 115.5 65 80.0
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.8e-23 112.5 88 55.7
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 1.8e-23 112.5 91 60.4
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.3e-23 112.1 90 54.4
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.1e-23 110.9 62 79.0
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 3.4e-19 98.2 89 49.4
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 5.9e-19 97.4 85 50.6
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 1.0e-18 96.7 75 57.3
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.2e-18 95.5 68 61.8
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 8.5e-18 93.6 62 66.1
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 1.9e-17 92.4 90 52.2
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.6e-16 89.4 57 63.2
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 5.1e-15 84.3 56 64.3
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 8.8e-15 83.6 57 68.4
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 8.8e-15 83.6 57 68.4
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 5.7e-14 80.9 85 40.0
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 1.3e-13 79.7 44 75.0
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 2.8e-13 78.6 78 47.4
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 6.5e-10 67.4 45 57.8
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 3.2e-09 65.1 71 42.3
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 3.2e-09 65.1 71 42.3
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 5.5e-09 64.3 43 60.5
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 5.5e-09 64.3 43 60.5
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 2.7e-08 62.0 82 37.8
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.6e-08 61.6 79 39.2
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.6e-08 61.6 79 39.2
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.6e-08 61.6 82 34.1
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 6.7e-07 57.4 70 40.0
MCO09G227 Micromonas commoda HOM05D004945 ORTHO05D005536 1.5e-06 56.2 89 33.7
Zm00001eb233510 Zea mays HOM05D004945 ORTHO05D005536 9.7e-06 53.5 42 52.4


User provided reference genes

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