Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3318 Trochodendron aralioides HOM05D024248 ORTHO05D001429 2.5e-49 198.4 94 100.0
TAR376G0312 Trochodendron aralioides HOM05D024248 ORTHO05D001429 7.9e-27 123.6 75 76.0
TAR376G0566 Trochodendron aralioides HOM05D024248 ORTHO05D001429 1.9e-20 102.4 78 66.7
TAR628G0811 Trochodendron aralioides HOM05D024248 ORTHO05D001429 1.6e-16 89.4 73 58.9
TAR628G1293 Trochodendron aralioides HOM05D024248 ORTHO05D001429 4.8e-16 87.8 73 57.5
TAR628G1637 Trochodendron aralioides HOM05D000955 ORTHO05D003340 7.9e-11 70.5 63 58.7
CAN.G445.5 Capsicum annuum HOM05D000955 ORTHO05D001429 9.7e-09 63.5 75 40.0
Zm00001eb100840 Zea mays HOM05D000955 ORTHO05D003340 4.8e-08 61.2 82 40.2
MBI02_g02966_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.4e-07 59.7 65 44.6
MBI02_g02976_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.8e-07 59.3 82 39.0
Nitab4.5_0001024g0060 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.8e-07 59.3 75 38.7
Sopen07g012140 Solanum pennellii HOM05D000955 ORTHO05D001429 1.8e-07 59.3 81 37.0
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 2.4e-07 58.9 81 39.5
Solyc01g150126.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 2.4e-07 58.9 83 36.1
PGSC0003DMG400004460 Solanum tuberosum HOM05D000955 ORTHO05D001429 3.1e-07 58.5 78 38.5
CSS0009132 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.3e-07 57.8 75 42.7
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 6.9e-07 57.4 84 36.9
Sopen01g015530 Solanum pennellii HOM05D000955 ORTHO05D001429 6.9e-07 57.4 82 35.4
CSS0012590 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 9.1e-07 57.0 78 41.0
MBI02_g02977_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 9.1e-07 57.0 97 37.1
Nn5g30250 Nelumbo nucifera HOM05D000955 ORTHO05D003340 1.2e-06 56.6 89 34.8
CSS0046588 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.5e-06 56.2 71 45.1
COL.COLO4_17164 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.5e-06 56.2 70 47.1
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 2.6e-06 55.5 79 38.0
CSS0027110 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.6e-06 55.5 75 41.3
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 2.6e-06 55.5 91 34.1
Nitab4.5_0002501g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.6e-06 55.5 75 38.7
Sed0006046 Sechium edule HOM05D000955 ORTHO05D001429 2.6e-06 55.5 73 39.7
CSS0003971 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 3.4e-06 55.1 75 41.3
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 3.4e-06 55.1 86 37.2
ClCG05G019810 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.4e-06 55.1 73 39.7
Lsat_1_v5_gn_4_125200 Lactuca sativa HOM05D000955 ORTHO05D001429 3.4e-06 55.1 83 36.1
HanXRQChr09g0267841 Helianthus annuus HOM05D000955 ORTHO05D001429 4.5e-06 54.7 83 34.9
Zm00001eb109460 Zea mays HOM05D000955 ORTHO05D003340 4.5e-06 54.7 74 37.8
CSS0008676 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.9e-06 54.3 78 39.7
CSS0049247 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.9e-06 54.3 75 41.3
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 5.9e-06 54.3 91 34.1
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 5.9e-06 54.3 76 35.5
QL02p005158 Quercus lobata HOM05D000955 ORTHO05D001429 5.9e-06 54.3 83 33.7
Eucgr.F00233 Eucalyptus grandis HOM05D000955 ORTHO05D003340 7.7e-06 53.9 73 32.9
Sed0002759 Sechium edule HOM05D000955 ORTHO05D001429 7.7e-06 53.9 84 35.7
PGSC0003DMG400023125 Solanum tuberosum HOM05D000955 ORTHO05D001429 7.7e-06 53.9 81 33.3


User provided reference genes

Program Settings