Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 5.8e-83 310.8 156 100.0
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.9e-73 279.3 148 94.6
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.2e-43 180.3 133 68.4
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.1e-41 173.7 109 78.9
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 4.3e-38 161.8 108 70.4
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 8.2e-37 157.5 109 71.6
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 1.4e-36 156.8 109 69.7
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 9.0e-36 154.1 108 67.6
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 1.2e-35 153.7 105 70.5
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 1.2e-35 153.7 102 70.6
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 1.5e-35 153.3 102 70.6
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 2.0e-35 152.9 109 67.9
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 3.4e-35 152.1 112 64.3
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 3.4e-35 152.1 102 69.6
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 3.4e-35 152.1 100 70.0
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 5.9e-35 151.4 109 68.8
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 5.9e-35 151.4 102 70.6
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 1.3e-34 150.2 128 57.0
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 1.3e-34 150.2 105 66.7
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 1.7e-34 149.8 109 66.1
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 1.7e-34 149.8 105 66.7
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 2.2e-34 149.4 96 74.0
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 3.8e-34 148.7 109 67.9
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 5.0e-34 148.3 100 71.0
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 6.5e-34 147.9 102 67.6
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 6.5e-34 147.9 103 67.0
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 8.5e-34 147.5 100 71.0
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 1.1e-33 147.1 109 65.1
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 1.4e-33 146.7 109 64.2
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 1.9e-33 146.4 109 65.1
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 2.5e-33 146.0 109 64.2
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 2.5e-33 146.0 109 64.2
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 2.5e-33 146.0 109 64.2
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 2.5e-33 146.0 103 67.0
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 3.2e-33 145.6 105 67.6
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 3.2e-33 145.6 100 70.0
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 3.2e-33 145.6 103 65.0
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 3.2e-33 145.6 102 67.6
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 3.2e-33 145.6 137 56.2
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 3.2e-33 145.6 103 67.0
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 4.2e-33 145.2 105 64.8
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 4.2e-33 145.2 110 66.4
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 5.5e-33 144.8 102 67.6
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 5.5e-33 144.8 102 67.6
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 7.2e-33 144.4 103 66.0
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 7.2e-33 144.4 102 66.7
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 9.4e-33 144.1 109 62.4
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 1.2e-32 143.7 101 68.3
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 1.6e-32 143.3 109 63.3
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 1.6e-32 143.3 101 65.3
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 2.1e-32 142.9 109 63.3
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 2.7e-32 142.5 96 64.6
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 3.6e-32 142.1 130 55.4
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 4.6e-32 141.7 131 55.7
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 4.6e-32 141.7 109 63.3
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 4.6e-32 141.7 109 64.2
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 4.6e-32 141.7 109 63.3
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 4.6e-32 141.7 97 64.9
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 6.1e-32 141.4 102 66.7
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 6.1e-32 141.4 109 62.4
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 6.1e-32 141.4 100 69.0
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 7.9e-32 141.0 100 64.0
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 7.9e-32 141.0 103 65.0
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 7.9e-32 141.0 102 63.7
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 1.4e-31 140.2 109 63.3
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 1.4e-31 140.2 130 54.6
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 1.8e-31 139.8 102 63.7
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.8e-31 139.8 102 65.7
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 1.8e-31 139.8 105 61.0
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 1.8e-31 139.8 105 61.0
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 2.3e-31 139.4 109 62.4
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 2.3e-31 139.4 109 63.3
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 2.3e-31 139.4 102 65.7
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 2.3e-31 139.4 105 64.8
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 3.0e-31 139.0 109 61.5
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 3.0e-31 139.0 110 62.7
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 3.0e-31 139.0 103 60.2
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 3.9e-31 138.7 95 64.2
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 3.9e-31 138.7 95 64.2
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 3.9e-31 138.7 102 62.7
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 3.9e-31 138.7 109 63.3
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 3.9e-31 138.7 130 56.9
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 3.9e-31 138.7 109 56.9
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 5.1e-31 138.3 103 60.2
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.1e-30 137.1 102 61.8
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 1.1e-30 137.1 130 53.8
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 1.1e-30 137.1 105 60.0
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 1.5e-30 136.7 104 69.2
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 2.5e-30 136.0 103 59.2
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 2.5e-30 136.0 99 59.6
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 2.5e-30 136.0 130 53.1
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 5.7e-30 134.8 103 61.2
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 5.7e-30 134.8 103 61.2
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 5.7e-30 134.8 105 59.0
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 5.7e-30 134.8 103 61.2
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 7.4e-30 134.4 130 51.5
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 9.7e-30 134.0 102 59.8
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 1.3e-29 133.7 103 60.2
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 1.7e-29 133.3 105 61.9
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 1.7e-29 133.3 109 58.7
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 2.2e-29 132.9 103 60.2
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 2.8e-29 132.5 130 50.8
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 8.2e-29 131.0 130 53.1
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 8.2e-29 131.0 109 57.8
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 8.2e-29 131.0 95 60.0
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 1.1e-28 130.6 109 60.6
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 1.1e-28 130.6 102 62.7
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 1.1e-28 130.6 102 60.8
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 1.8e-28 129.8 103 59.2
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 1.8e-28 129.8 95 56.8
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 3.1e-28 129.0 128 51.6
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 4.1e-28 128.6 101 61.4
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 5.3e-28 128.3 102 61.8
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 9.1e-28 127.5 105 59.0
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 1.2e-24 117.1 96 59.4
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 3.6e-24 115.5 96 59.4
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 8.8e-23 110.9 97 52.6
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 1.1e-22 110.5 103 50.5
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 5.7e-22 108.2 106 47.2
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 1.8e-20 103.2 106 51.9
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 3.1e-20 102.4 83 57.8
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 1.3e-18 97.1 69 63.8
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 2.7e-16 89.4 56 71.4
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.7e-16 89.4 63 63.5
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 1.8e-15 86.7 75 53.3
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.8e-07 60.1 37 70.3
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 3.0e-07 59.3 43 62.8
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 4.4e-06 55.5 71 43.7
EL10Ac5g11505 Beta vulgaris HOM05D005736 ORTHO05D026989 5.7e-06 55.1 40 62.5


User provided reference genes

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