Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.6e-64 249.2 118 100.0
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 7.3e-54 213.8 117 86.3
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 2.1e-53 212.2 116 86.2
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 3.6e-53 211.5 117 83.8
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.7e-53 211.1 116 83.6
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 6.2e-53 210.7 116 84.5
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 6.2e-53 210.7 117 83.8
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 6.2e-53 210.7 117 83.8
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 8.0e-53 210.3 116 84.5
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 8.0e-53 210.3 116 84.5
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 1.8e-52 209.1 117 82.1
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.3e-52 208.8 116 85.3
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 2.3e-52 208.8 116 85.3
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.1e-52 208.4 116 83.6
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 3.1e-52 208.4 116 82.8
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.0e-52 208.0 117 82.1
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 5.2e-52 207.6 116 81.9
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 5.2e-52 207.6 116 83.6
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 5.2e-52 207.6 116 81.9
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 5.2e-52 207.6 117 82.1
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 5.2e-52 207.6 116 84.5
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 5.2e-52 207.6 116 84.5
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 6.8e-52 207.2 117 82.1
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 6.8e-52 207.2 117 81.2
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 8.9e-52 206.8 116 85.3
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 8.9e-52 206.8 117 81.2
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 1.5e-51 206.1 117 81.2
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.5e-51 206.1 116 81.9
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.5e-51 206.1 116 81.9
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 1.5e-51 206.1 117 81.2
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 1.5e-51 206.1 117 81.2
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 2.0e-51 205.7 117 81.2
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.0e-51 205.7 117 81.2
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 2.0e-51 205.7 117 82.1
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 2.0e-51 205.7 117 82.1
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 2.6e-51 205.3 116 79.3
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 2.6e-51 205.3 116 81.9
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 3.4e-51 204.9 116 83.6
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 3.4e-51 204.9 117 79.5
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 3.4e-51 204.9 116 80.2
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 4.4e-51 204.5 116 79.3
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 4.4e-51 204.5 116 81.0
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 4.4e-51 204.5 116 83.6
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 5.8e-51 204.1 117 78.6
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 9.8e-51 203.4 116 81.0
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 9.8e-51 203.4 116 83.6
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 9.8e-51 203.4 117 80.3
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 9.8e-51 203.4 116 79.3
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 1.3e-50 203.0 116 81.9
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 1.3e-50 203.0 117 81.2
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 1.7e-50 202.6 117 77.8
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.7e-50 202.6 116 81.0
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 1.7e-50 202.6 116 81.0
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.2e-50 202.2 117 80.3
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 2.2e-50 202.2 116 78.4
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 3.7e-50 201.4 116 80.2
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 4.9e-50 201.1 116 81.0
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 6.4e-50 200.7 116 80.2
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 8.3e-50 200.3 116 80.2
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 8.3e-50 200.3 117 78.6
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 8.3e-50 200.3 117 79.5
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 1.1e-49 199.9 116 79.3
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 1.1e-49 199.9 117 79.5
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 1.1e-49 199.9 116 81.0
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 1.1e-49 199.9 116 81.0
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 1.4e-49 199.5 116 79.3
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 1.4e-49 199.5 116 79.3
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 1.4e-49 199.5 116 79.3
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 1.4e-49 199.5 116 79.3
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 1.4e-49 199.5 116 80.2
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 1.4e-49 199.5 116 79.3
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 1.4e-49 199.5 116 76.7
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 1.9e-49 199.1 116 79.3
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 1.9e-49 199.1 116 79.3
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 1.9e-49 199.1 116 79.3
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 1.9e-49 199.1 116 76.7
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 2.4e-49 198.7 116 78.4
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 2.4e-49 198.7 116 79.3
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 4.1e-49 198.0 116 79.3
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 5.4e-49 197.6 116 81.0
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 7.0e-49 197.2 116 77.6
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 7.0e-49 197.2 116 80.2
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 2.0e-48 195.7 116 78.4
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 2.0e-48 195.7 116 79.3
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 3.5e-48 194.9 111 82.0
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 1.3e-47 193.0 117 76.9
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 3.0e-47 191.8 118 76.3
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 6.6e-47 190.7 111 80.2
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 6.6e-47 190.7 117 76.1
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 8.6e-47 190.3 115 75.7
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 1.5e-46 189.5 116 78.4
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 1.9e-46 189.1 115 74.8
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 1.9e-46 189.1 118 74.6
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 2.5e-46 188.7 115 75.7
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.5e-46 188.7 116 76.7
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 3.3e-46 188.3 117 74.4
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 9.5e-46 186.8 117 74.4
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 2.1e-45 185.7 111 75.7
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 2.1e-45 185.7 115 73.0
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 6.2e-45 184.1 115 72.2
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 1.8e-44 182.6 115 73.9
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 1.3e-42 176.4 117 66.7
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 2.2e-42 175.6 115 72.2
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.2e-40 169.9 85 95.3
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 3.5e-40 168.3 91 85.7
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 7.8e-40 167.2 93 83.9
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 3.0e-39 165.2 88 87.5
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 6.6e-39 164.1 100 73.0
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 1.9e-38 162.5 115 71.3
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 1.2e-35 153.3 92 76.1
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 4.9e-34 147.9 117 63.2
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 1.2e-32 143.3 117 60.7
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.3e-31 139.8 100 64.0
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 3.0e-31 138.7 117 63.2
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 2.9e-26 122.1 115 51.3
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 4.9e-26 121.3 141 43.3
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 5.6e-22 107.8 115 43.5
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 3.1e-20 102.1 66 72.7


User provided reference genes

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