Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3266 Trochodendron aralioides HOM05D003389 ORTHO05D003917 4.4e-98 361.3 184 100.0
TAR636G1874 Trochodendron aralioides HOM05D003389 ORTHO05D003917 3.1e-43 179.1 182 56.6
Nn6g34315 Nelumbo nucifera HOM05D003389 ORTHO05D003917 6.9e-43 177.9 182 56.0
Nn1g01292 Nelumbo nucifera HOM05D003389 ORTHO05D003917 9.0e-43 177.6 182 56.0
Dinv37703 Davidia involucrata HOM05D003389 ORTHO05D003917 1.0e-41 174.1 181 54.7
CSS0021110 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 6.5e-41 171.4 182 53.3
Dinv39033 Davidia involucrata HOM05D003389 ORTHO05D003917 8.4e-41 171.0 181 54.1
MBI11_g05095_MAGBIO Magnolia biondii HOM05D003389 ORTHO05D003917 2.5e-40 169.5 184 53.8
Duzib084G0706 Durio zibethinus HOM05D003389 ORTHO05D003917 3.2e-40 169.1 179 53.6
QL12p016621 Quercus lobata HOM05D003389 ORTHO05D003917 1.2e-39 167.2 171 56.1
Glyma.01G214700 Glycine max HOM05D003389 ORTHO05D003917 3.5e-39 165.6 174 54.6
Potri.001G112300 Populus trichocarpa HOM05D003389 ORTHO05D003917 4.6e-39 165.2 180 52.8
COL.COLO4_23793 Corchorus olitorius HOM05D003389 ORTHO05D003917 6.0e-39 164.9 140 61.4
Manes.02G030300 Manihot esculenta HOM05D003389 ORTHO05D003917 6.0e-39 164.9 172 54.7
CANSAT21G1884 Cannabis sativa HOM05D003389 ORTHO05D003917 7.9e-39 164.5 173 55.5
TWI15G1193 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 1.0e-38 164.1 167 54.5
Phvul.002G153200 Phaseolus vulgaris HOM05D003389 ORTHO05D003917 1.3e-38 163.7 179 52.5
CiPaw.12G100200 Carya illinoinensis HOM05D003389 ORTHO05D003917 1.8e-38 163.3 185 51.9
TWI81G0612 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 1.8e-38 163.3 170 54.1
PGSC0003DMG400022735 Solanum tuberosum HOM05D003389 ORTHO05D003917 3.0e-38 162.5 180 51.7
Actinidia05234 Actinidia chinensis HOM05D003389 ORTHO05D003917 3.9e-38 162.2 181 51.9
Duzib068G0926 Durio zibethinus HOM05D003389 ORTHO05D003917 3.9e-38 162.2 179 52.0
Gohir.A09G193500 Gossypium hirsutum HOM05D003389 ORTHO05D003917 3.9e-38 162.2 179 52.0
Gorai.006G210500 Gossypium raimondii HOM05D003389 ORTHO05D003917 3.9e-38 162.2 179 52.0
Duzib205G0992 Durio zibethinus HOM05D003389 ORTHO05D003917 6.7e-38 161.4 175 53.1
Sopen08g028470 Solanum pennellii HOM05D003389 ORTHO05D003917 8.7e-38 161.0 180 51.7
Sabra03G0084000 Salix brachista HOM05D003389 ORTHO05D003917 1.1e-37 160.6 175 52.6
Sed0023838 Sechium edule HOM05D003389 ORTHO05D003917 1.1e-37 160.6 168 53.6
Sc07g0009480 Simmondsia chinensis HOM05D003389 ORTHO05D003917 1.1e-37 160.6 139 60.4
Gohir.D08G195800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.5e-37 160.2 179 51.4
Gohir.D09G187700 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.5e-37 160.2 179 51.4
Gorai.004G206500 Gossypium raimondii HOM05D003389 ORTHO05D003917 1.5e-37 160.2 179 51.4
Gorai.007G022100 Gossypium raimondii HOM05D003389 ORTHO05D003917 1.5e-37 160.2 177 53.7
Manes.01G069600 Manihot esculenta HOM05D003389 ORTHO05D003917 1.5e-37 160.2 168 53.6
Peaxi162Scf00620g00617 Petunia axillaris HOM05D003389 ORTHO05D003917 1.5e-37 160.2 175 53.1
Prupe.5G088000 Prunus persica HOM05D003389 ORTHO05D003917 1.5e-37 160.2 173 54.3
arahy.Tifrunner.gnm1.ann1.18T4MA Arachis hypogaea HOM05D003389 ORTHO05D003917 1.9e-37 159.8 174 53.4
arahy.Tifrunner.gnm1.ann1.HGX6IC Arachis hypogaea HOM05D003389 ORTHO05D003917 1.9e-37 159.8 174 53.4
Lalb_Chr09g0324691 Lupinus albus HOM05D003389 ORTHO05D003917 1.9e-37 159.8 180 51.1
RcHm_v2.0_Chr7g0199771 Rosa chinensis HOM05D003389 ORTHO05D003917 1.9e-37 159.8 143 58.7
Thecc.03G268500 Theobroma cacao HOM05D003389 ORTHO05D003917 1.9e-37 159.8 175 52.6
VMungo1215G1985 Vigna mungo HOM05D003389 ORTHO05D003917 1.9e-37 159.8 176 51.7
Ca_06667_v3 Cicer arietinum L. HOM05D003389 ORTHO05D003917 2.5e-37 159.5 173 51.4
Nitab4.5_0008362g0010 Nicotiana tabacum HOM05D003389 ORTHO05D003917 3.3e-37 159.1 179 52.5
Lj2g0004762 Lotus japonicus HOM05D003389 ORTHO05D003917 4.3e-37 158.7 180 50.6
PGR031G2775 Punica granatum HOM05D003389 ORTHO05D003917 4.3e-37 158.7 172 52.9
FAN18G0817 Fragaria x ananassa HOM05D003389 ORTHO05D003917 5.7e-37 158.3 143 58.7
Gohir.A08G177400 Gossypium hirsutum HOM05D003389 ORTHO05D003917 5.7e-37 158.3 179 50.8
SGA_v2.0_scaffold286G47125 Striga asiatica HOM05D003389 ORTHO05D003917 5.7e-37 158.3 179 50.3
FvH4_5g01250 Fragaria vesca HOM05D003389 ORTHO05D003917 7.4e-37 157.9 143 58.7
Potri.003G119800 Populus trichocarpa HOM05D003389 ORTHO05D003917 7.4e-37 157.9 171 53.2
FAN04G3242 Fragaria x ananassa HOM05D003389 ORTHO05D003917 9.6e-37 157.5 143 58.7
FAN08G2451 Fragaria x ananassa HOM05D003389 ORTHO05D003917 9.6e-37 157.5 143 58.7
FAN13G0159 Fragaria x ananassa HOM05D003389 ORTHO05D003917 9.6e-37 157.5 143 58.7
Ciclev10019075m.g Citrus clementina HOM05D003389 ORTHO05D003917 1.3e-36 157.1 172 52.9
Glyma.04G257602 Glycine max HOM05D003389 ORTHO05D003917 1.3e-36 157.1 138 60.1
Hund11535 Selenicereus undatus HOM05D003389 ORTHO05D003917 1.3e-36 157.1 143 57.3
GSVIVG01019881001 Vitis vinifera HOM05D003389 ORTHO05D003917 1.3e-36 157.1 178 52.2
Cfa012079 Carpinus fangiana HOM05D003389 ORTHO05D003917 1.6e-36 156.8 176 53.4
Cc08_g13790 Coffea canephora HOM05D003389 ORTHO05D003917 1.6e-36 156.8 171 52.0
Atru.chr9.1507 Acer truncatum HOM05D003389 ORTHO05D003917 2.1e-36 156.4 172 51.7
CAN.G981.56 Capsicum annuum HOM05D003389 ORTHO05D003917 2.1e-36 156.4 179 51.4
Gohir.A11G021100 Gossypium hirsutum HOM05D003389 ORTHO05D003917 2.1e-36 156.4 177 52.5
CiPaw.11G142600 Carya illinoinensis HOM05D003389 ORTHO05D003917 2.8e-36 156.0 171 53.2
Sed0009929 Sechium edule HOM05D003389 ORTHO05D003917 3.7e-36 155.6 170 51.2
PSO782G1906 Papaver somniferum HOM05D003389 ORTHO05D003917 6.2e-36 154.8 184 51.6
Lj2C201G3 Lonicera japonica HOM05D003389 ORTHO05D003917 8.2e-36 154.5 137 59.1
Hund14708 Selenicereus undatus HOM05D003389 ORTHO05D003917 1.1e-35 154.1 136 60.3
CsaV3_5G003350 Cucumis sativus L. HOM05D003389 ORTHO05D003917 1.8e-35 153.3 170 51.2
Oeu001902.1 Olea europaea HOM05D003389 ORTHO05D003917 1.8e-35 153.3 175 50.3
PSO478G1498 Papaver somniferum HOM05D003389 ORTHO05D003917 1.8e-35 153.3 184 51.1
Sabra01G0085800 Salix brachista HOM05D003389 ORTHO05D003917 2.4e-35 152.9 183 50.3
Nitab4.5_0001714g0090 Nicotiana tabacum HOM05D003389 ORTHO05D003917 3.1e-35 152.5 150 56.0
ECA240G1577 Erigeron canadensis HOM05D003389 ORTHO05D003917 4.1e-35 152.1 137 57.7
Glyma.03G264902 Glycine max HOM05D003389 ORTHO05D003917 4.1e-35 152.1 138 58.7
Migut.E01161 Erythranthe guttata HOM05D003389 ORTHO05D003917 5.3e-35 151.8 179 48.6
Psat2g181120 Pisum sativum HOM05D003389 ORTHO05D003917 5.3e-35 151.8 169 52.1
Gohir.D11G020800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 6.9e-35 151.4 183 51.4
HPP92_022000 Vanilla planifolia HOM05D003389 ORTHO05D003917 6.9e-35 151.4 183 49.2
Aqoxy5G03952 Aquilegia oxysepala HOM05D003389 ORTHO05D003917 9.0e-35 151.0 189 49.7
AT4G11860 Arabidopsis thaliana HOM05D003389 ORTHO05D003917 9.0e-35 151.0 170 50.6
Glyma.11G027200 Glycine max HOM05D003389 ORTHO05D003917 9.0e-35 151.0 162 54.3
EL10Ac5g12710 Beta vulgaris HOM05D003389 ORTHO05D003917 1.2e-34 150.6 180 50.0
TAR636G0614 Trochodendron aralioides HOM05D003389 ORTHO05D003917 1.2e-34 150.6 143 57.3
CDE04G0877 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 2.0e-34 149.8 178 50.6
AUR62017315 Chenopodium quinoa HOM05D003389 ORTHO05D003917 2.0e-34 149.8 134 57.5
Aa31LG9G10590 Aethionema arabicum HOM05D003389 ORTHO05D003917 2.6e-34 149.4 141 56.0
Carub.0006s3095 Capsella rubella HOM05D003389 ORTHO05D003917 2.6e-34 149.4 167 51.5
CARHR254440 Cardamine hirsuta HOM05D003389 ORTHO05D003917 2.6e-34 149.4 167 51.5
Thhalv10028490m.g Eutrema salsugineum HOM05D003389 ORTHO05D003917 4.5e-34 148.7 167 51.5
Sp6g05610 Schrenkiella parvula HOM05D003389 ORTHO05D003917 5.8e-34 148.3 171 50.9
HanXRQChr11g0336621 Helianthus annuus HOM05D003389 ORTHO05D003917 7.6e-34 147.9 171 49.7
Ah.12g057800 Amaranthus hybridus HOM05D003389 ORTHO05D003917 1.0e-33 147.5 143 55.9
SGA_v2.0_scaffold144G35980 Striga asiatica HOM05D003389 ORTHO05D003917 1.0e-33 147.5 178 47.8
BcaB01g01683 Brassica carinata HOM05D003389 ORTHO05D003917 1.3e-33 147.1 170 50.6
A09p27250 Brassica napus HOM05D003389 ORTHO05D003917 1.7e-33 146.7 180 48.3
CSS0044016 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 1.7e-33 146.7 173 50.9
Lsat_1_v5_gn_6_10400 Lactuca sativa HOM05D003389 ORTHO05D003917 3.8e-33 145.6 176 48.9
BraA09t38293Z Brassica rapa HOM05D003389 ORTHO05D003917 5.0e-33 145.2 179 48.0
THA.LOC104806361 Tarenaya hassleriana HOM05D003389 ORTHO05D003917 5.0e-33 145.2 171 50.3
AUR62010575 Chenopodium quinoa HOM05D003389 ORTHO05D003917 6.5e-33 144.8 134 56.7
SalBow6G3358 Salvia bowleyana HOM05D003389 ORTHO05D003917 8.4e-33 144.4 172 47.7
BcaC04g21168 Brassica carinata HOM05D003389 ORTHO05D003917 1.1e-32 144.1 171 50.9
C09p34580 Brassica napus HOM05D003389 ORTHO05D003917 1.1e-32 144.1 171 50.9
BolC9t56305H Brassica oleracea HOM05D003389 ORTHO05D003917 1.1e-32 144.1 171 50.9
Medtr5g011090 Medicago truncatula HOM05D003389 ORTHO05D003917 1.1e-32 144.1 140 55.7
THA.LOC104814202 Tarenaya hassleriana HOM05D003389 ORTHO05D003917 1.1e-32 144.1 169 49.1
Lsat_1_v5_gn_6_79100 Lactuca sativa HOM05D003389 ORTHO05D003917 1.9e-32 143.3 139 55.4
SEGI_34401 Sequoiadendron giganteum HOM05D003389 ORTHO05D003917 4.2e-32 142.1 182 46.7
DCAR_008431 Daucus carota HOM05D003389 ORTHO05D003917 1.6e-31 140.2 137 54.7
unitig_699.g19759 Utricularia gibba HOM05D003389 ORTHO05D003917 1.6e-31 140.2 138 52.9
SHI13491 Sapria himalayana HOM05D003389 ORTHO05D003917 2.1e-31 139.8 141 52.5
Os06g0712400 Oryza sativa ssp. japonica HOM05D003389 ORTHO05D003917 3.5e-31 139.0 131 55.0
A01p14230 Brassica napus HOM05D003389 ORTHO05D003917 4.6e-31 138.7 138 50.7
ECA233G2019 Erigeron canadensis HOM05D003389 ORTHO05D003917 1.0e-30 137.5 137 51.8
BraA01t01370Z Brassica rapa HOM05D003389 ORTHO05D003917 1.8e-30 136.7 138 50.0
Hma1.2p1_0138F.1_g062730 Hydrangea macrophylla HOM05D003389 ORTHO05D003917 6.7e-30 134.8 237 38.0
ATR0661G488 Amborella trichopoda HOM05D003389 ORTHO05D003917 8.7e-30 134.4 184 45.7
C01p17500 Brassica napus HOM05D003389 ORTHO05D003917 1.1e-29 134.0 135 51.9
Zm00001eb227790 Zea mays HOM05D003389 ORTHO05D003917 1.1e-29 134.0 150 49.3
Sp7g21050 Schrenkiella parvula HOM05D003389 ORTHO05D003917 1.6e-28 130.2 138 47.8
MD04G1069900 Malus domestica HOM05D003389 ORTHO05D003917 2.2e-28 129.8 136 54.4
Cpa.g.sc29.33 Carica papaya HOM05D003389 ORTHO05D003917 2.8e-28 129.4 144 52.1
Aa31LG6G5010 Aethionema arabicum HOM05D003389 ORTHO05D003917 6.3e-28 128.3 169 45.6
BcaC09g51049 Brassica carinata HOM05D003389 ORTHO05D003917 8.2e-28 127.9 132 50.8
Thhalv10027519m.g Eutrema salsugineum HOM05D003389 ORTHO05D003917 1.8e-27 126.7 145 49.0
Pp3c17_3230 Physcomitrium patens HOM05D003389 ORTHO05D003917 1.8e-27 126.7 136 47.1
TPR.G14842 Trifolium pratense HOM05D003389 ORTHO05D003917 1.8e-27 126.7 113 56.6
BolC1t01690H Brassica oleracea HOM05D003389 ORTHO05D003917 3.1e-27 125.9 133 50.4
Pp3c12_2860 Physcomitrium patens HOM05D003389 ORTHO05D003917 4.1e-27 125.6 148 45.3
Eucgr.D01936 Eucalyptus grandis HOM05D003389 ORTHO05D003917 5.3e-27 125.2 158 48.1
Lj8A241G19 Lonicera japonica HOM05D003389 ORTHO05D003917 1.5e-26 123.6 158 48.1
MD06G1071400 Malus domestica HOM05D003389 ORTHO05D003917 1.5e-26 123.6 136 52.2
SMO367G0360 Selaginella moellendorffii HOM05D003389 ORTHO05D003917 1.5e-26 123.6 173 41.0
Eucgr.D01938 Eucalyptus grandis HOM05D003389 ORTHO05D003917 2.0e-26 123.2 111 57.7
BcaNung01008 Brassica carinata HOM05D003389 ORTHO05D003917 2.6e-26 122.9 133 48.9
Lj2C200G2 Lonicera japonica HOM05D003389 ORTHO05D003917 1.0e-25 120.9 107 57.9
Mapoly0108s0010 Marchantia polymorpha HOM05D003389 ORTHO05D003917 1.7e-25 120.2 141 44.7
AagrBONN_evm.TU.Sc2ySwM_228.3893 Anthoceros agrestis HOM05D003389 ORTHO05D003917 2.9e-25 119.4 139 46.0
SalBow1G6995 Salvia bowleyana HOM05D003262 ORTHO05D003917 1.1e-24 117.5 146 48.6
BraA03t14599Z Brassica rapa HOM05D003389 ORTHO05D003917 1.9e-24 116.7 131 46.6
BraA03t14615Z Brassica rapa HOM05D003389 ORTHO05D003917 1.9e-24 116.7 131 46.6
Rhsim11G0008100 Rhododendron simsii HOM05D003389 ORTHO05D003917 1.9e-24 116.7 122 50.0
RcHm_v2.0_Chr1g0379891 Rosa chinensis HOM05D003389 ORTHO05D003917 7.2e-24 114.8 176 43.8
FAN09G4798 Fragaria x ananassa HOM05D003389 ORTHO05D003917 1.0e-22 110.9 143 47.6
Actinidia14499 Actinidia chinensis HOM05D003389 ORTHO05D003917 1.8e-22 110.2 200 39.0
CBR_g38139 Chara braunii HOM05D003389 ORTHO05D003917 3.9e-22 109.0 125 43.2
MBI04_g06622_MAGBIO Magnolia biondii HOM05D003389 ORTHO05D003917 6.7e-22 108.2 119 48.7
vmacro00214 Vaccinium macrocarpon HOM05D003389 ORTHO05D003917 1.1e-21 107.5 195 40.0
Haze_08980 Corylus avellana HOM05D003389 ORTHO05D003917 6.3e-20 101.7 136 46.3
Migut.A00906 Erythranthe guttata HOM05D003389 ORTHO05D003917 1.1e-19 100.9 125 45.6
Migut.A00905 Erythranthe guttata HOM05D003389 ORTHO05D003917 1.4e-19 100.5 93 51.6
PSO170G2389 Papaver somniferum HOM05D003389 ORTHO05D003917 1.4e-19 100.5 145 43.4
PSO302G0081 Papaver somniferum HOM05D003389 ORTHO05D003917 5.3e-19 98.6 145 42.8
AL7G30560 Arabidopsis lyrata HOM05D003389 ORTHO05D003917 2.6e-18 96.3 140 38.6
DCAR_022882 Daucus carota HOM05D003389 ORTHO05D003917 2.6e-18 96.3 120 45.0
HanXRQChr02g0043491 Helianthus annuus HOM05D003389 ORTHO05D003917 4.5e-18 95.5 175 34.3
HanXRQChr02g0043501 Helianthus annuus HOM05D003389 ORTHO05D003917 7.7e-18 94.7 84 48.8
MELO3C005619.2 Cucumis melo HOM05D003389 ORTHO05D003917 8.5e-17 91.3 169 37.9
MCO06G239 Micromonas commoda HOM05D003389 ORTHO05D003917 1.4e-16 90.5 170 35.9
PRCOL_00006333 Prasinoderma coloniale HOM05D003389 ORTHO05D003917 9.4e-16 87.8 147 36.1
Carub.0007s1831 Capsella rubella HOM05D003389 ORTHO05D003917 2.7e-15 86.3 159 36.5
Cre06.g304850 Chlamydomonas reinhardtii HOM05D003389 ORTHO05D003917 1.0e-14 84.3 129 39.5
AT4G22960 Arabidopsis thaliana HOM05D003389 ORTHO05D003917 1.4e-14 84.0 165 33.3
ClCG01G003270 Citrullus lanatus HOM05D003389 ORTHO05D003917 1.8e-14 83.6 194 34.5
CDE12G0774 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 7.4e-13 78.2 118 46.6
Zm00001eb033290 Zea mays HOM05D003389 ORTHO05D003917 5.9e-10 68.6 127 33.9
Aqoxy1G01439 Aquilegia oxysepala HOM05D001108 ORTHO05D001619 2.2e-09 66.6 126 30.2
Os06g0721600 Oryza sativa ssp. japonica HOM05D003389 ORTHO05D020930 1.6e-07 60.5 123 34.1
Os06g0723400 Oryza sativa ssp. japonica HOM05D003389 ORTHO05D020930 1.6e-07 60.5 123 34.1
Eucgr.D01937 Eucalyptus grandis HOM05D003389 ORTHO05D003917 1.4e-06 57.4 164 30.5


User provided reference genes

Program Settings