Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3242 Trochodendron aralioides HOM05D002553 ORTHO05D002767 1.4e-173 612.8 300 100.0
TAR636G3134 Trochodendron aralioides HOM05D002553 ORTHO05D002767 5.9e-100 368.2 336 60.4
Dinv22901 Davidia involucrata HOM05D002553 ORTHO05D002767 1.1e-74 284.3 337 48.1
Dinv23976 Davidia involucrata HOM05D002553 ORTHO05D002767 1.1e-74 284.3 337 48.1
TAR362G0623 Trochodendron aralioides HOM05D002553 ORTHO05D002767 1.8e-72 276.9 337 48.4
Nn4g26152 Nelumbo nucifera HOM05D002553 ORTHO05D002767 3.0e-72 276.2 337 48.4
Hma1.2p1_0666F.1_g199470 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 8.8e-72 274.6 337 47.2
Lalb_Chr18g0045531 Lupinus albus HOM05D002553 ORTHO05D002767 1.3e-70 270.8 337 45.7
COL.COLO4_13515 Corchorus olitorius HOM05D002553 ORTHO05D002767 2.2e-70 270.0 337 46.3
RcHm_v2.0_Chr3g0454121 Rosa chinensis HOM05D002553 ORTHO05D002767 3.7e-70 269.2 337 46.6
Aqoxy5G00545 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 4.8e-70 268.9 337 46.6
Thecc.05G308000 Theobroma cacao HOM05D002553 ORTHO05D002767 1.8e-69 266.9 170 74.1
CAN.G1134.23 Capsicum annuum HOM05D002553 ORTHO05D002767 2.4e-69 266.5 337 45.4
MD04G1209000 Malus domestica HOM05D002553 ORTHO05D002767 2.4e-69 266.5 352 44.0
CiPaw.07G014800 Carya illinoinensis HOM05D002553 ORTHO05D002767 4.1e-69 265.8 337 46.3
Solyc01g098700.4 Solanum lycopersicum HOM05D002553 ORTHO05D002767 5.4e-69 265.4 351 45.3
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 7.0e-69 265.0 170 72.4
TWI12G0069 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 9.1e-69 264.6 337 45.4
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 1.2e-68 264.2 337 45.7
VMungo0540G1597 Vigna mungo HOM05D002553 ORTHO05D002767 1.2e-68 264.2 337 45.7
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 2.0e-68 263.5 183 67.8
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 2.0e-68 263.5 170 72.9
Sopen01g042240 Solanum pennellii HOM05D002553 ORTHO05D002767 2.7e-68 263.1 351 45.0
Phvul.006G093911 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 4.5e-68 262.3 337 45.4
PSO210G1325 Papaver somniferum HOM05D002553 ORTHO05D002767 1.0e-67 261.2 337 45.1
DCAR_003314 Daucus carota HOM05D002553 ORTHO05D002767 1.3e-67 260.8 337 45.4
Lj5g0009152 Lotus japonicus HOM05D002553 ORTHO05D002767 1.3e-67 260.8 337 45.4
PGSC0003DMG401028577 Solanum tuberosum HOM05D002553 ORTHO05D002767 1.7e-67 260.4 184 67.4
Haze_04233 Corylus avellana HOM05D002553 ORTHO05D002767 2.2e-67 260.0 183 67.2
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 2.9e-67 259.6 170 71.8
QL03p004498 Quercus lobata HOM05D002553 ORTHO05D002767 3.8e-67 259.2 337 45.1
Atru.chr2.475 Acer truncatum HOM05D002553 ORTHO05D002767 5.0e-67 258.8 337 45.4
Peaxi162Scf00434g00216 Petunia axillaris HOM05D002553 ORTHO05D002767 5.0e-67 258.8 183 68.3
Potri.005G039100 Populus trichocarpa HOM05D002553 ORTHO05D002767 6.5e-67 258.5 337 45.4
Sabra05G0037500 Salix brachista HOM05D002553 ORTHO05D002767 6.5e-67 258.5 337 44.8
FAN14G5684 Fragaria x ananassa HOM05D002553 ORTHO05D002767 8.5e-67 258.1 183 67.2
Glyma.03G240100 Glycine max HOM05D002553 ORTHO05D002767 1.5e-66 257.3 337 45.4
Lj9C682T7 Lonicera japonica HOM05D002553 ORTHO05D002767 1.5e-66 257.3 170 71.2
FvH4_6g05350 Fragaria vesca HOM05D002553 ORTHO05D002767 3.2e-66 256.1 183 66.7
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 5.5e-66 255.4 184 66.8
Prupe.6G330000 Prunus persica HOM05D002553 ORTHO05D002767 7.2e-66 255.0 169 71.6
FAN09G0499 Fragaria x ananassa HOM05D002553 ORTHO05D002767 9.4e-66 254.6 337 44.8
AUR62005107 Chenopodium quinoa HOM05D002553 ORTHO05D002767 1.2e-65 254.2 319 44.8
arahy.Tifrunner.gnm1.ann1.0VD1AP Arachis hypogaea HOM05D002553 ORTHO05D002767 1.6e-65 253.8 184 64.7
Cc02_g32710 Coffea canephora HOM05D002553 ORTHO05D002767 1.6e-65 253.8 335 45.7
TPR.G2739 Trifolium pratense HOM05D002553 ORTHO05D002767 1.6e-65 253.8 337 43.9
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 2.1e-65 253.4 174 67.8
arahy.Tifrunner.gnm1.ann1.7PL8A0 Arachis hypogaea HOM05D002553 ORTHO05D002767 4.7e-65 252.3 184 65.2
Gorai.013G123700 Gossypium raimondii HOM05D002553 ORTHO05D002767 4.7e-65 252.3 167 71.3
Sc09g0003340 Simmondsia chinensis HOM05D002553 ORTHO05D002767 4.7e-65 252.3 170 68.8
Glyma.19G237000 Glycine max HOM05D002553 ORTHO05D002767 6.1e-65 251.9 167 71.3
Hund07047 Selenicereus undatus HOM05D002553 ORTHO05D002767 8.0e-65 251.5 337 43.3
Ah.06g190110 Amaranthus hybridus HOM05D002553 ORTHO05D002767 1.8e-64 250.4 170 68.2
Cpa.g.sc48.14 Carica papaya HOM05D002553 ORTHO05D002767 1.8e-64 250.4 170 70.0
Gohir.D13G110400 Gossypium hirsutum HOM05D002553 ORTHO05D002767 1.8e-64 250.4 167 70.7
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 4.0e-64 249.2 351 42.2
Psat6g149240 Pisum sativum HOM05D002553 ORTHO05D002767 4.0e-64 249.2 337 43.0
Lsat_1_v5_gn_1_25020 Lactuca sativa HOM05D002553 ORTHO05D002767 6.8e-64 248.4 183 64.5
Medtr1g083370 Medicago truncatula HOM05D002553 ORTHO05D002767 1.5e-63 247.3 337 43.9
MELO3C004297.2 Cucumis melo HOM05D002553 ORTHO05D002767 3.4e-63 246.1 183 62.8
CsaV3_2G004990 Cucumis sativus L. HOM05D002553 ORTHO05D002767 3.4e-63 246.1 183 62.8
CANSAT54G1986 Cannabis sativa HOM05D002553 ORTHO05D002767 5.7e-63 245.4 183 64.5
HPP92_001339 Vanilla planifolia HOM05D002553 ORTHO05D002767 7.5e-63 245.0 337 43.0
AUR62000869 Chenopodium quinoa HOM05D002553 ORTHO05D002767 9.8e-63 244.6 168 67.9
Eucgr.B02001 Eucalyptus grandis HOM05D002553 ORTHO05D002767 2.8e-62 243.0 337 44.2
ECA247G0575 Erigeron canadensis HOM05D002553 ORTHO05D002767 8.3e-62 241.5 183 65.0
vmacro19641 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 8.3e-62 241.5 169 69.2
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 1.1e-61 241.1 170 67.6
THA.LOC104802808 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 1.1e-61 241.1 337 42.1
Medtr1g082470 Medicago truncatula HOM05D002553 ORTHO05D002767 1.4e-61 240.7 183 63.9
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 1.8e-61 240.4 183 61.7
ATR0626G263 Amborella trichopoda HOM05D002553 ORTHO05D002767 5.4e-61 238.8 167 70.1
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 7.0e-61 238.4 183 62.3
Thhalv10020427m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 7.0e-61 238.4 170 65.9
AL3G15610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 1.2e-60 237.7 183 61.7
HanXRQChr02g0037091 Helianthus annuus HOM05D002553 ORTHO05D002767 2.0e-60 236.9 183 63.9
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 2.7e-60 236.5 183 62.3
CARHR079530 Cardamine hirsuta HOM05D002553 ORTHO05D002767 5.9e-60 235.3 183 62.3
PGR083G1620 Punica granatum HOM05D002553 ORTHO05D002767 1.0e-59 234.6 358 41.9
AT3G05190 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.3e-59 234.2 183 60.7
Migut.B01190 Erythranthe guttata HOM05D002553 ORTHO05D002767 1.3e-59 234.2 184 62.0
Sp3g04040 Schrenkiella parvula HOM05D002553 ORTHO05D002767 1.3e-59 234.2 183 61.2
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 2.3e-59 233.4 183 61.2
BNapus_Darmor_BZH_scaffold_114p00250 Brassica napus HOM05D002553 ORTHO05D002767 2.9e-59 233.0 183 61.2
BcaNung04368 Brassica carinata HOM05D002553 ORTHO05D002767 6.6e-59 231.9 183 60.7
BraSC132t45517Z Brassica rapa HOM05D002553 ORTHO05D002767 1.5e-58 230.7 180 61.1
Aa31LG5G15560 Aethionema arabicum HOM05D002553 ORTHO05D002767 2.5e-58 229.9 184 60.3
BcaNung02463 Brassica carinata HOM05D002553 ORTHO05D002767 2.5e-58 229.9 183 60.7
MSTRG.16977 Avicennia marina HOM05D002553 ORTHO05D002767 4.3e-58 229.2 338 41.4
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 5.6e-58 228.8 183 60.1
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 5.6e-58 228.8 183 60.1
AL6G39600 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 7.3e-58 228.4 183 60.1
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 7.3e-58 228.4 183 60.1
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 7.3e-58 228.4 183 60.1
MSTRG.5079 Avicennia marina HOM05D002553 ORTHO05D002767 1.2e-57 227.6 337 40.7
Carub.0003s0444 Capsella rubella HOM05D002553 ORTHO05D002767 1.6e-57 227.3 183 59.6
BcaB04g21368 Brassica carinata HOM05D002553 ORTHO05D002767 3.6e-57 226.1 177 61.0
Ca_10093_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 3.6e-57 226.1 337 40.9
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 3.6e-57 226.1 308 44.5
Carub.0006s2513 Capsella rubella HOM05D002553 ORTHO05D002767 4.7e-57 225.7 183 58.5
A09p05260 Brassica napus HOM05D002553 ORTHO05D002767 6.1e-57 225.3 183 60.7
CARHR186010 Cardamine hirsuta HOM05D002553 ORTHO05D002767 6.1e-57 225.3 184 59.8
BcaC04g23681 Brassica carinata HOM05D002553 ORTHO05D002767 8.0e-57 224.9 183 60.1
Zm00001eb017520 Zea mays HOM05D002553 ORTHO05D002767 1.0e-56 224.6 168 63.1
BolC1t05708H Brassica oleracea HOM05D002553 ORTHO05D002767 1.4e-56 224.2 162 65.4
SalBow5G4087 Salvia bowleyana HOM05D002553 ORTHO05D002767 2.3e-56 223.4 180 60.6
Oeu012095.1 Olea europaea HOM05D002553 ORTHO05D002767 1.2e-55 221.1 165 64.8
SGA_v2.0_scaffold43G16279 Striga asiatica HOM05D002553 ORTHO05D002767 2.6e-55 219.9 362 40.6
Gohir.A13G107100 Gossypium hirsutum HOM05D002553 ORTHO05D002767 8.3e-54 214.9 137 72.3
BraA09t36165Z Brassica rapa HOM05D002553 ORTHO05D002767 4.6e-52 209.1 183 58.5
Mapoly0006s0260 Marchantia polymorpha HOM05D002553 ORTHO05D002767 1.7e-51 207.2 171 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2814 Anthoceros agrestis HOM05D002553 ORTHO05D002767 6.8e-48 195.3 170 52.9
Pp3c6_5420 Physcomitrium patens HOM05D002553 ORTHO05D002767 8.9e-48 194.9 171 53.8
TPR.G3095 Trifolium pratense HOM05D002553 ORTHO05D002767 1.7e-46 190.7 197 50.8
SMO356G0084 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 7.0e-45 185.3 169 52.7
Pp3c16_17790 Physcomitrium patens HOM05D002553 ORTHO05D002767 9.2e-45 184.9 338 34.3
MD12G1223700 Malus domestica HOM05D002553 ORTHO05D002767 1.2e-44 184.5 277 40.8
Nitab4.5_0004271g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 4.6e-44 182.6 297 40.1
Rhsim05G0144300 Rhododendron simsii HOM05D002553 ORTHO05D002767 1.1e-42 177.9 366 37.2
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.9e-42 177.2 290 40.7
CSS0026671 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 4.3e-42 176.0 163 58.3
Oeu004302.1 Olea europaea HOM05D002553 ORTHO05D002767 4.3e-42 176.0 131 66.4
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 5.6e-42 175.6 290 40.3
CSS0016581 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 1.6e-41 174.1 142 63.4
Oeu013074.1 Olea europaea HOM05D002553 ORTHO05D002767 2.1e-41 173.7 149 60.4
C09p05740 Brassica napus HOM05D002553 ORTHO05D002767 3.6e-41 172.9 171 53.2
BolC9t53501H Brassica oleracea HOM05D002553 ORTHO05D002767 3.6e-41 172.9 171 53.2
TPR.G3038 Trifolium pratense HOM05D002553 ORTHO05D002767 2.0e-39 167.2 119 65.5
Migut.N01859 Erythranthe guttata HOM05D002553 ORTHO05D002767 7.5e-39 165.2 187 49.7
Nitab4.5_0006809g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 3.9e-35 152.9 284 38.0
Glyma.10G156850 Glycine max HOM05D002553 ORTHO05D002767 4.6e-28 129.4 91 64.8
EL10As2g23202 Beta vulgaris HOM05D002553 ORTHO05D002767 4.3e-26 122.9 96 60.4
MCO02G411 Micromonas commoda HOM05D002553 ORTHO05D002767 4.4e-23 112.8 171 37.4
Cre10.g458050 Chlamydomonas reinhardtii HOM05D002553 ORTHO05D002767 2.5e-18 97.1 215 32.1
Haze_21959 Corylus avellana HOM05D002553 ORTHO05D002767 1.5e-15 87.8 82 53.7
CSS0036549 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 8.4e-14 82.0 80 51.2
CBR_g26137 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-06 56.6 99 37.4


User provided reference genes

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