Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.0e-92 342.4 178 100.0
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.9e-62 242.3 176 73.9
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 4.3e-58 228.4 178 74.2
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 3.2e-45 185.7 178 62.4
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.2e-33 146.4 127 64.6
TAR371G1152 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.0e-22 110.9 166 41.0
TAR371G0786 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.8e-19 100.1 149 43.0
TAR371G1039 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.3e-17 94.0 161 41.0
TAR371G0052 Trochodendron aralioides HOM05D012741 ORTHO05D006336 9.1e-16 87.8 173 38.7
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.0e-14 84.3 112 42.0
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.0e-14 82.0 112 40.2
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 6.5e-14 81.6 153 32.7
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 8.5e-14 81.3 108 40.7
TAR371G0332 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.1e-13 80.9 110 44.5
TAR371G0183 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.9e-13 80.1 178 36.0
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-12 77.4 153 31.4
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 1.0e-11 74.3 108 38.0
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 1.8e-11 73.6 96 41.7
Aqoxy2G03202 Aquilegia oxysepala HOM05D012741 ORTHO05D006336 5.2e-11 72.0 154 34.4
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 6.7e-11 71.6 117 39.3
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.8e-11 71.2 117 40.2
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 1.1e-10 70.9 117 39.3
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 1.5e-10 70.5 113 35.4
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 1.5e-10 70.5 117 39.3
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.5e-10 70.5 117 39.3
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 7.4e-10 68.2 117 38.5
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 7.4e-10 68.2 104 39.4
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 9.7e-10 67.8 108 35.2
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 2.8e-09 66.2 101 42.6
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 2.8e-09 66.2 114 38.6
Thecc.02G319400 Theobroma cacao HOM05D012426 ORTHO05D013579 2.8e-09 66.2 103 38.8
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.7e-09 65.9 109 38.5
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 4.8e-09 65.5 115 37.4
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.8e-09 65.5 115 37.4
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 4.8e-09 65.5 104 35.6
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 6.3e-09 65.1 110 37.3
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.1e-08 64.3 108 32.4
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.4e-08 63.9 103 35.9
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 1.4e-08 63.9 117 35.9
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 2.4e-08 63.2 106 34.0
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 3.1e-08 62.8 116 31.9
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 7.0e-08 61.6 111 32.4
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 7.0e-08 61.6 103 36.9
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 9.1e-08 61.2 114 35.1
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 9.1e-08 61.2 109 40.4
ClCG04G011470 Citrullus lanatus HOM05D014519 ORTHO05D006336 1.6e-07 60.5 90 38.9
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 2.0e-07 60.1 108 31.5
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 2.0e-07 60.1 168 31.0
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 2.6e-07 59.7 168 31.0
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.6e-07 59.7 103 30.1
Dinv01546 Davidia involucrata HOM05D012328 ORTHO05D014719 3.5e-07 59.3 162 32.1
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 4.5e-07 58.9 99 34.3
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 7.7e-07 58.2 139 27.3
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.7e-07 58.2 129 30.2
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 7.7e-07 58.2 101 31.7
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 7.7e-07 58.2 104 35.6
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 1.0e-06 57.8 146 31.5
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.3e-06 57.4 112 33.0
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.3e-06 57.4 110 38.2
Dinv01547 Davidia involucrata HOM05D012328 ORTHO05D014719 1.3e-06 57.4 159 28.3
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 1.3e-06 57.4 84 40.5
Dinv03423 Davidia involucrata HOM05D030132 ORTHO05D029233 1.7e-06 57.0 113 33.6
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 2.2e-06 56.6 140 32.1
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.2e-06 56.6 105 34.3
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 2.9e-06 56.2 111 34.2
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 2.9e-06 56.2 93 33.3
Nn3g19334 Nelumbo nucifera HOM05D012741 ORTHO05D277491 3.8e-06 55.8 140 32.9
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 6.5e-06 55.1 173 28.9


User provided reference genes

Program Settings