Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 1.4e-125 453.0 226 100.0
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 2.2e-99 365.9 230 82.6
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 9.2e-98 360.5 221 80.1
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 6.6e-96 354.4 227 79.7
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 2.8e-94 349.0 227 76.2
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 1.8e-93 346.3 218 78.0
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 8.9e-93 344.0 203 82.8
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 3.4e-92 342.0 226 76.5
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 6.4e-91 337.8 208 79.8
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 8.3e-91 337.4 208 79.3
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 2.4e-90 335.9 188 85.1
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 3.2e-90 335.5 223 75.3
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 5.4e-90 334.7 207 80.7
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 2.7e-89 332.4 222 75.7
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 4.6e-89 331.6 204 78.9
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 2.3e-88 329.3 220 75.9
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 2.3e-88 329.3 196 82.7
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 5.1e-88 328.2 224 72.8
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 8.6e-88 327.4 226 71.7
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 1.1e-87 327.0 213 76.5
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 1.5e-87 326.6 220 75.5
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 1.9e-87 326.2 226 72.6
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 1.9e-87 326.2 227 73.1
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 2.5e-87 325.9 230 72.2
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 3.3e-87 325.5 252 68.3
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 3.3e-87 325.5 202 79.2
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 4.3e-87 325.1 224 73.7
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 5.6e-87 324.7 221 71.5
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 5.6e-87 324.7 226 72.6
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 7.3e-87 324.3 211 76.8
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 7.3e-87 324.3 221 74.7
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 9.6e-87 323.9 224 73.2
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 1.6e-86 323.2 226 73.0
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 2.1e-86 322.8 227 71.8
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 2.1e-86 322.8 181 84.0
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 4.7e-86 321.6 226 71.7
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 4.7e-86 321.6 180 85.0
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 6.2e-86 321.2 217 72.8
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 8.1e-86 320.9 223 72.6
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 1.8e-85 319.7 224 71.0
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 2.4e-85 319.3 200 78.5
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 3.1e-85 318.9 227 70.9
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 3.1e-85 318.9 218 73.4
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 4.0e-85 318.5 191 80.6
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 4.0e-85 318.5 219 74.9
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 4.0e-85 318.5 233 70.8
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 6.8e-85 317.8 227 71.8
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 1.2e-84 317.0 181 83.4
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 1.5e-84 316.6 195 78.5
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 4.4e-84 315.1 222 73.4
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 9.9e-84 313.9 221 71.5
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 9.9e-84 313.9 192 77.6
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 1.7e-83 313.2 201 77.6
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 1.7e-83 313.2 183 82.5
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 1.7e-83 313.2 219 71.7
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 2.2e-83 312.8 185 82.7
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 2.2e-83 312.8 248 66.5
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 2.9e-83 312.4 185 79.5
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 2.9e-83 312.4 227 69.6
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 2.9e-83 312.4 187 79.1
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 4.9e-83 311.6 207 72.9
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 1.4e-82 310.1 220 70.5
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 1.4e-82 310.1 220 70.5
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 2.4e-82 309.3 208 74.0
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 2.4e-82 309.3 226 73.5
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 3.2e-82 308.9 223 72.2
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 4.2e-82 308.5 231 68.4
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 9.3e-82 307.4 227 66.5
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 9.3e-82 307.4 192 76.0
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 1.6e-81 306.6 232 69.8
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 4.6e-81 305.1 175 84.6
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 1.3e-80 303.5 219 70.3
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 1.3e-80 303.5 321 55.8
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 2.3e-80 302.8 178 84.3
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 6.6e-80 301.2 178 77.5
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.5e-79 300.1 228 68.4
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 1.9e-79 299.7 194 76.3
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 2.5e-79 299.3 223 69.5
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 5.6e-79 298.1 224 66.5
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 5.6e-79 298.1 216 70.4
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 7.3e-79 297.7 176 83.0
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 6.2e-78 294.7 179 78.8
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 6.2e-78 294.7 227 68.3
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 1.8e-77 293.1 163 86.5
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 5.3e-77 291.6 158 87.3
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 9.0e-77 290.8 182 76.9
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 1.5e-76 290.0 156 87.2
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 3.4e-76 288.9 158 85.4
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 8.4e-75 284.3 187 72.2
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 6.0e-73 278.1 168 78.6
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 7.9e-73 277.7 183 75.4
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 3.8e-67 258.8 237 59.1
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 4.2e-66 255.4 173 70.5
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 3.5e-65 252.3 166 74.1
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 1.1e-63 247.3 147 76.9
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 5.8e-60 235.0 118 90.7
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 2.5e-58 229.6 184 63.6
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 1.6e-57 226.9 213 54.9
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 2.7e-57 226.1 122 84.4
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 1.8e-56 223.4 178 58.4
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 5.8e-52 208.4 122 77.0
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 4.2e-50 202.2 180 58.3
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 1.6e-49 200.3 201 50.7
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 2.5e-47 193.0 197 55.8
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 1.7e-43 180.3 115 76.5
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 1.7e-43 180.3 115 76.5
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 1.1e-42 177.6 118 69.5
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 1.4e-42 177.2 94 85.1
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 2.8e-30 136.3 91 76.9
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 3.2e-26 122.9 65 86.2
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 5.2e-24 115.5 68 82.4
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 4.5e-20 102.4 179 34.6
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 1.1e-18 97.8 126 37.3
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 6.1e-17 92.0 91 56.0
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.8e-16 90.5 65 69.2
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 5.7e-15 85.5 48 77.1
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 5.7e-15 85.5 129 34.1
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.8e-13 80.5 108 48.1
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 3.6e-09 66.2 123 30.1
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 3.0e-08 63.2 164 26.8
MD04G1093800 Malus domestica HOM05D006544 ORTHO05D247365 5.7e-07 58.9 35 77.1


User provided reference genes

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