Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3111 Trochodendron aralioides HOM05D000010 ORTHO05D016350 8.8e-75 283.5 139 100.0
TAR627G0208 Trochodendron aralioides HOM05D000010 ORTHO05D016350 9.1e-72 273.5 139 96.4
TAR626G0405 Trochodendron aralioides HOM05D000010 ORTHO05D016350 1.6e-71 272.7 139 96.4
TAR628G1065 Trochodendron aralioides HOM05D000010 ORTHO05D016350 1.6e-71 272.7 139 96.4
TAR374G1709 Trochodendron aralioides HOM05D000010 ORTHO05D016350 2.6e-71 271.9 139 95.7
TAR383G0421 Trochodendron aralioides HOM05D000010 ORTHO05D016350 5.9e-71 270.8 139 95.0
TAR371G0573 Trochodendron aralioides HOM05D000010 ORTHO05D016350 1.0e-70 270.0 139 95.0
TAR629G0707 Trochodendron aralioides HOM05D000010 ORTHO05D000302 2.3e-67 258.8 139 93.5
TAR371G0989 Trochodendron aralioides HOM05D000010 ORTHO05D016350 2.8e-65 251.9 141 90.1
TAR623G0650 Trochodendron aralioides HOM05D000010 ORTHO05D016350 3.1e-64 248.4 127 96.1
TAR625G1362 Trochodendron aralioides HOM05D000010 ORTHO05D016350 3.1e-64 248.4 127 96.1
TAR371G1259 Trochodendron aralioides HOM05D000010 ORTHO05D000302 7.0e-40 167.5 151 64.2
Aqoxy3G00288 Aquilegia oxysepala HOM05D000010 ORTHO05D000302 7.3e-29 131.0 140 52.1
QL10p025405 Quercus lobata HOM05D000010 ORTHO05D000302 9.5e-29 130.6 158 50.6
Potri.015G046800 Populus trichocarpa HOM05D000010 ORTHO05D000302 1.4e-27 126.7 156 53.8
vmacro16447 Vaccinium macrocarpon HOM05D000010 ORTHO05D000302 1.4e-27 126.7 161 50.3
Rhsim12G0143200 Rhododendron simsii HOM05D000010 ORTHO05D000302 1.2e-26 123.6 165 50.9
Dinv28106 Davidia involucrata HOM05D000010 ORTHO05D000302 2.0e-26 122.9 158 50.6
GSVIVG01008291001 Vitis vinifera HOM05D000010 ORTHO05D000302 2.6e-26 122.5 162 48.1
Nn4g23853 Nelumbo nucifera HOM05D000010 ORTHO05D016350 1.3e-25 120.2 143 52.4
CSS0012261 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 1.7e-25 119.8 156 51.3
Sabra12G0040000 Salix brachista HOM05D000010 ORTHO05D000302 2.2e-25 119.4 151 48.3
Potri.012G056300 Populus trichocarpa HOM05D000010 ORTHO05D000302 1.9e-24 116.3 142 50.0
Glyma.07G092000 Glycine max HOM05D000010 ORTHO05D000302 2.7e-23 112.5 164 46.3
Sabra15G0038900 Salix brachista HOM05D000010 ORTHO05D000302 7.8e-23 110.9 154 48.7
Manes.01G011200 Manihot esculenta HOM05D000010 ORTHO05D000302 1.3e-22 110.2 166 45.2
Hma1.2p1_0653F.1_g196270 Hydrangea macrophylla HOM05D000010 ORTHO05D000302 3.9e-22 108.6 154 48.7
Dinv15679 Davidia involucrata HOM05D000010 ORTHO05D000302 3.3e-21 105.5 168 45.8
Actinidia18932 Actinidia chinensis HOM05D000010 ORTHO05D000302 4.3e-21 105.1 147 46.9
Lj9A426T58 Lonicera japonica HOM05D000010 ORTHO05D000302 4.3e-21 105.1 174 47.1
Peaxi162Scf00634g00032 Petunia axillaris HOM05D000010 ORTHO05D000302 5.6e-21 104.8 162 49.4
VMungo0464G0988 Vigna mungo HOM05D000010 ORTHO05D000302 5.6e-21 104.8 166 41.6
Lsat_1_v5_gn_2_83520 Lactuca sativa HOM05D000010 ORTHO05D000302 7.3e-21 104.4 140 44.3
HanXRQChr16g0516661 Helianthus annuus HOM05D000010 ORTHO05D000302 3.6e-20 102.1 141 44.0
Phvul.004G156700 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 3.6e-20 102.1 159 41.5
Duzib084G0434 Durio zibethinus HOM05D000010 ORTHO05D000302 4.7e-20 101.7 163 46.0
Duzib205G0543 Durio zibethinus HOM05D000010 ORTHO05D000302 4.7e-20 101.7 158 46.8
Atru.chr9.856 Acer truncatum HOM05D000010 ORTHO05D000302 2.4e-19 99.4 168 45.8
Manes.05G112755 Manihot esculenta HOM05D000010 ORTHO05D000302 3.1e-19 99.0 166 44.6
Duzib068G0771 Durio zibethinus HOM05D000010 ORTHO05D000302 5.2e-19 98.2 157 43.9
Ciclev10023578m.g Citrus clementina HOM05D000010 ORTHO05D000302 8.9e-19 97.4 170 44.7
Cc04_g07090 Coffea canephora HOM05D000010 ORTHO05D000302 8.9e-19 97.4 161 47.8
Actinidia39831 Actinidia chinensis HOM05D000010 ORTHO05D000302 2.0e-18 96.3 153 49.7
Medtr6g084430 Medicago truncatula HOM05D000010 ORTHO05D000302 2.6e-18 95.9 164 42.7
Lj2g0006796 Lotus japonicus HOM05D000010 ORTHO05D000302 3.4e-18 95.5 165 41.8
Actinidia19836 Actinidia chinensis HOM05D000010 ORTHO05D000302 9.9e-18 94.0 144 45.1
PSO478G0242 Papaver somniferum HOM05D000010 ORTHO05D000302 9.9e-18 94.0 170 42.9
TPR.G28224 Trifolium pratense HOM05D000010 ORTHO05D000302 2.2e-17 92.8 166 40.4
Hund10249 Selenicereus undatus HOM05D000010 ORTHO05D000302 2.9e-17 92.4 165 43.0
Lalb_Chr22g0353101 Lupinus albus HOM05D000010 ORTHO05D000302 3.8e-17 92.0 162 40.7
Nn3g17854 Nelumbo nucifera HOM05D000010 ORTHO05D000302 6.4e-17 91.3 165 47.3
Psat1g037400 Pisum sativum HOM05D000010 ORTHO05D000302 1.9e-16 89.7 171 39.8
CiPaw.15G131000 Carya illinoinensis HOM05D000010 ORTHO05D000302 2.4e-16 89.4 170 41.2
COL.COLO4_11304 Corchorus olitorius HOM05D000010 ORTHO05D000302 3.2e-16 89.0 174 38.5
Haze_18681 Corylus avellana HOM05D000010 ORTHO05D000302 3.2e-16 89.0 160 41.9
Oeu031916.1 Olea europaea HOM05D000010 ORTHO05D000302 4.2e-16 88.6 129 48.1
Hund02387 Selenicereus undatus HOM05D000010 ORTHO05D000302 1.2e-15 87.0 157 40.8
Gorai.006G060900 Gossypium raimondii HOM05D000010 ORTHO05D000302 1.6e-15 86.7 163 41.7
Gohir.A09G047900 Gossypium hirsutum HOM05D000010 ORTHO05D000302 2.1e-15 86.3 161 39.8
EL10Ac5g11071 Beta vulgaris HOM05D000010 ORTHO05D000302 2.7e-15 85.9 178 36.5
CiPaw.16G086300 Carya illinoinensis HOM05D000010 ORTHO05D000302 3.5e-15 85.5 177 41.8
Oeu058034.1 Olea europaea HOM05D000010 ORTHO05D000302 3.5e-15 85.5 131 46.6
CSS0047314 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 4.6e-15 85.1 153 39.9
Gohir.D09G049100 Gossypium hirsutum HOM05D000010 ORTHO05D000302 6.0e-15 84.7 162 40.7
MD06G1216500 Malus domestica HOM05D000010 ORTHO05D000302 6.0e-15 84.7 200 38.5
Glyma.05G234200 Glycine max HOM05D000010 ORTHO05D000302 7.8e-15 84.3 160 40.6
PSO017G4743 Papaver somniferum HOM05D000010 ORTHO05D000302 7.8e-15 84.3 167 38.3
Prupe.5G221600 Prunus persica HOM05D000010 ORTHO05D000302 1.0e-14 84.0 182 41.8
Phvul.002G316500 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 2.3e-14 82.8 156 44.9
Solyc12g036480.2 Solanum lycopersicum HOM05D000010 ORTHO05D000302 3.0e-14 82.4 161 44.1
Lalb_Chr14g0371141 Lupinus albus HOM05D000010 ORTHO05D000302 5.1e-14 81.6 170 39.4
Sopen12g017030 Solanum pennellii HOM05D000010 ORTHO05D000302 1.5e-13 80.1 166 42.2
TWI81G0876 Tripterygium wilfordii HOM05D000010 ORTHO05D000302 4.3e-13 78.6 161 41.0
MBI16_g23780_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000302 9.6e-13 77.4 91 50.5
CSS0026185 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 2.1e-12 76.3 153 37.3
Cpa.g.sc3.509 Carica papaya HOM05D000010 ORTHO05D000302 2.8e-12 75.9 172 38.4
MD14G1226900 Malus domestica HOM05D000010 ORTHO05D000302 2.8e-12 75.9 202 39.1
Nitab4.5_0012710g0010 Nicotiana tabacum HOM05D000010 ORTHO05D000302 3.6e-12 75.5 153 45.8
PGSC0003DMG400005384 Solanum tuberosum HOM05D000010 ORTHO05D000302 3.6e-12 75.5 169 41.4
Sed0002630 Sechium edule HOM05D000010 ORTHO05D000302 4.8e-12 75.1 151 36.4
TWI15G1245 Tripterygium wilfordii HOM05D000010 ORTHO05D000302 4.8e-12 75.1 174 39.7
Glyma.08G041500 Glycine max HOM05D000010 ORTHO05D000302 2.0e-10 69.7 150 38.7
Nitab4.5_0007985g0010 Nicotiana tabacum HOM05D000010 ORTHO05D000302 3.4e-10 68.9 157 44.6
Nitab4.5_0001194g0040 Nicotiana tabacum HOM05D000010 ORTHO05D000302 9.9e-10 67.4 156 44.9
Sed0007039 Sechium edule HOM05D000010 ORTHO05D000302 9.9e-10 67.4 141 37.6
Glyma.09G184100 Glycine max HOM05D000010 ORTHO05D000302 1.7e-09 66.6 154 36.4
Nitab4.5_0000208g0310 Nicotiana tabacum HOM05D000010 ORTHO05D000302 2.9e-09 65.9 157 38.9
MELO3C017308.2 Cucumis melo HOM05D000010 ORTHO05D000302 3.9e-06 55.5 181 33.7
CsaV3_1G003840 Cucumis sativus L. HOM05D000010 ORTHO05D000302 5.1e-06 55.1 184 34.8
ClCG06G014790 Citrullus lanatus HOM05D000010 ORTHO05D000302 8.7e-06 54.3 187 30.5


User provided reference genes

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