Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.0e-132 475.7 232 100.0
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 3.4e-103 378.6 229 77.7
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 1.3e-102 376.7 224 79.0
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 5.4e-101 371.3 233 77.3
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 9.1e-101 370.5 233 76.4
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 3.8e-99 365.2 231 74.5
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 4.2e-98 361.7 224 76.8
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.2e-97 360.1 232 73.3
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.6e-97 359.8 217 76.0
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.0e-96 357.1 234 73.9
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 2.3e-96 355.9 217 76.5
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 2.3e-96 355.9 217 75.1
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 8.8e-96 354.0 217 74.7
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.7e-94 348.6 217 74.2
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.9e-94 348.2 218 74.8
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.2e-92 343.6 229 70.7
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 2.0e-92 342.8 234 71.4
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 3.5e-92 342.0 217 73.7
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 4.5e-92 341.7 232 69.0
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 7.8e-92 340.9 216 73.1
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.0e-91 340.5 222 70.7
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 3.8e-91 338.6 215 73.0
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.1e-90 337.0 239 69.5
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 2.5e-90 335.9 227 69.6
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 4.3e-90 335.1 218 69.7
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 4.3e-90 335.1 204 76.5
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 9.5e-90 334.0 223 69.1
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 9.5e-90 334.0 224 68.3
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 9.5e-90 334.0 218 68.3
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 1.2e-89 333.6 218 67.4
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 2.8e-89 332.4 195 81.0
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 6.1e-89 331.3 216 72.2
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 8.0e-89 330.9 229 67.2
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 8.0e-89 330.9 216 71.8
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 1.0e-88 330.5 218 72.0
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 1.4e-88 330.1 215 71.6
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.4e-88 330.1 222 69.8
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 1.8e-88 329.7 216 71.8
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 2.3e-88 329.3 218 68.8
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 3.0e-88 328.9 240 65.8
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 4.0e-88 328.6 210 70.5
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 1.2e-87 327.0 210 71.4
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.6e-87 325.9 218 67.4
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 3.4e-87 325.5 222 68.9
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.4e-87 325.1 216 70.4
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 9.8e-87 323.9 212 68.4
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 9.8e-87 323.9 220 70.0
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.3e-86 323.6 215 68.8
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.7e-86 323.2 213 68.5
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 1.7e-86 323.2 218 71.1
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.1e-85 320.5 213 68.1
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.1e-85 320.5 229 68.1
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.4e-85 320.1 218 65.6
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 1.8e-85 319.7 214 68.7
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 7.0e-85 317.8 240 65.0
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 9.2e-85 317.4 216 65.7
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 3.5e-84 315.5 216 67.1
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 5.9e-84 314.7 216 68.1
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 2.3e-83 312.8 215 66.5
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 5.0e-83 311.6 215 66.0
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.5e-82 310.1 216 64.8
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.9e-82 309.7 213 67.6
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.5e-82 309.3 213 64.3
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 3.3e-82 308.9 215 67.0
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 7.3e-82 307.8 222 64.0
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 7.3e-82 307.8 222 64.0
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 7.3e-82 307.8 222 64.0
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 9.5e-82 307.4 215 64.7
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.2e-81 307.0 222 64.0
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 2.1e-81 306.2 215 63.7
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 2.1e-81 306.2 208 68.8
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 2.8e-81 305.8 230 62.6
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 3.6e-81 305.4 213 67.1
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.1e-80 303.9 215 63.7
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.8e-80 303.1 210 65.7
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 3.1e-80 302.4 215 63.3
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 4.0e-80 302.0 213 62.9
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.2e-79 300.4 214 63.1
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 3.4e-79 298.9 219 63.5
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 6.4e-78 294.7 213 62.0
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 8.3e-78 294.3 178 76.4
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.4e-77 293.5 214 60.7
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.4e-77 292.7 242 62.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 3.2e-77 292.4 213 61.5
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 4.1e-77 292.0 210 65.2
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 4.1e-77 292.0 219 63.0
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 5.4e-77 291.6 209 64.1
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.6e-76 290.0 213 62.4
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 4.6e-76 288.5 268 53.0
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 1.0e-75 287.3 226 58.0
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 1.7e-75 286.6 218 62.4
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 5.0e-75 285.0 198 67.7
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 6.6e-75 284.6 218 61.9
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 4.7e-73 278.5 222 59.5
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 9.9e-71 270.8 218 57.8
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.4e-69 266.9 223 58.7
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.3e-67 260.4 253 51.0
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 2.4e-64 249.6 181 65.7
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 6.8e-64 248.1 157 75.8
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 6.8e-64 248.1 176 65.3
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 4.4e-63 245.4 218 53.2
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.7e-62 243.4 175 62.9
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 6.4e-62 241.5 175 64.0
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.1e-61 240.7 205 57.6
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.2e-57 227.3 213 51.2
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 5.2e-56 221.9 209 46.9
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 5.2e-56 221.9 218 49.1
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 9.0e-56 221.1 239 46.4
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.2e-52 210.7 159 58.5
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 7.8e-52 208.0 214 44.9
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.0e-51 206.1 203 47.8
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 1.1e-50 204.1 177 56.5
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 7.3e-50 201.4 211 44.5
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 9.6e-50 201.1 164 61.0
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.0e-43 181.0 136 61.8
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.6e-42 175.3 113 72.6
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 4.9e-38 162.2 161 49.7
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 3.8e-30 136.0 217 31.3
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 6.5e-30 135.2 132 50.0
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.9e-29 133.7 82 75.6
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 4.5e-23 112.5 221 32.6
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 3.6e-20 102.8 96 52.1
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 2.0e-15 87.0 101 46.5
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 2.2e-14 83.6 56 64.3
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 5.5e-13 79.0 79 50.6
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 7.9e-12 75.1 116 32.8
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.1e-10 71.2 43 67.4
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 3.1e-08 63.2 40 62.5
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 5.3e-08 62.4 46 58.7


User provided reference genes

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