Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2958 Trochodendron aralioides HOM05D000007 ORTHO05D000521 3.3e-109 398.3 189 100.0
TAR627G0357 Trochodendron aralioides HOM05D000007 ORTHO05D000521 1.4e-19 100.5 184 36.4
TAR627G1140 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.2e-18 97.4 182 34.6
TAR629G3172 Trochodendron aralioides HOM05D000007 ORTHO05D000521 4.3e-16 89.0 137 41.6
TAR626G0901 Trochodendron aralioides HOM05D000007 ORTHO05D000017 7.6e-13 78.2 168 31.5
Ciclev10015426m.g Citrus clementina HOM05D000007 ORTHO05D000521 5.5e-11 72.0 174 27.6
Gohir.D07G196000 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.1e-10 70.1 147 28.6
Gorai.001G219500 Gossypium raimondii HOM05D000007 ORTHO05D000521 2.1e-10 70.1 147 28.6
Aqoxy1G04045 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.5e-10 69.3 165 27.3
Atru.chr6.3330 Acer truncatum HOM05D000007 ORTHO05D000521 2.3e-09 66.6 174 25.9
Thecc.01G185500 Theobroma cacao HOM05D000007 ORTHO05D000521 5.1e-09 65.5 171 26.3
Dinv30807 Davidia involucrata HOM05D000007 ORTHO05D000017 6.7e-09 65.1 194 25.3
Cfa014275 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.5e-08 63.9 171 25.7
Haze_12720 Corylus avellana HOM05D000007 ORTHO05D000521 2.5e-08 63.2 171 25.1
Hma1.2p1_0127F.1_g059580 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 3.3e-08 62.8 198 26.8
CiPaw.09G103100 Carya illinoinensis HOM05D000007 ORTHO05D000017 5.7e-08 62.0 185 25.9
Aqoxy2G03513 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 7.4e-08 61.6 162 27.8
Duzib133G1250 Durio zibethinus HOM05D000007 ORTHO05D000521 7.4e-08 61.6 171 25.7
Potri.001G035500 Populus trichocarpa HOM05D000007 ORTHO05D000017 7.4e-08 61.6 183 26.2
QL08p029353 Quercus lobata HOM05D000007 ORTHO05D000521 9.7e-08 61.2 144 28.5
Rhsim04G0042300 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.6e-07 60.5 80 40.0
Manes.12G062501 Manihot esculenta HOM05D000007 ORTHO05D000521 2.2e-07 60.1 174 25.3
Manes.12G062601 Manihot esculenta HOM05D000007 ORTHO05D000521 2.2e-07 60.1 174 25.3
MD09G1119500 Malus domestica HOM05D000007 ORTHO05D000521 2.8e-07 59.7 146 28.1
Nn6g34491 Nelumbo nucifera HOM05D000007 ORTHO05D000017 2.8e-07 59.7 167 26.9
Sp3g06790 Schrenkiella parvula HOM05D000007 ORTHO05D000521 2.8e-07 59.7 153 29.4
TAR636G3533 Trochodendron aralioides HOM05D000007 ORTHO05D000017 6.3e-07 58.5 48 58.3
Cc04_g11930 Coffea canephora HOM05D000007 ORTHO05D000017 8.2e-07 58.2 164 26.8
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 8.2e-07 58.2 192 24.5
Lj2P943T5 Lonicera japonica HOM05D000007 ORTHO05D000017 8.2e-07 58.2 192 24.5
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 8.2e-07 58.2 127 31.5
vmacro03637 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 8.2e-07 58.2 193 25.9
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.1e-06 57.8 193 26.4
Aqoxy1G00939 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 2.4e-06 56.6 129 29.5
COL.COLO4_03689 Corchorus olitorius HOM05D002102 ORTHO05D004119 2.4e-06 56.6 182 24.2
Hma1.2p1_1292F.1_g273710 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 3.1e-06 56.2 181 28.7
Manes.09G077457 Manihot esculenta HOM05D000007 ORTHO05D000017 4.1e-06 55.8 187 25.1
Nn1g02068 Nelumbo nucifera HOM05D000007 ORTHO05D000017 4.1e-06 55.8 151 29.8
A03p35500 Brassica napus HOM05D000007 ORTHO05D000521 5.3e-06 55.5 153 28.1
BraA03t12727Z Brassica rapa HOM05D000007 ORTHO05D000521 5.3e-06 55.5 153 28.1
Duzib138G0431 Durio zibethinus HOM05D000007 ORTHO05D000521 5.3e-06 55.5 153 26.8
Hma1.2p1_0405F.1_g145690 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 5.3e-06 55.5 149 23.5
THA.LOC104806333 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.3e-06 55.5 199 24.6
TWI18G1020 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 5.3e-06 55.5 171 25.7
Duzib138G1758 Durio zibethinus HOM05D000007 ORTHO05D000521 6.9e-06 55.1 220 25.9
Actinidia09174 Actinidia chinensis HOM05D000007 ORTHO05D000017 9.0e-06 54.7 168 29.8
Aqoxy1G00924 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 9.0e-06 54.7 154 29.2
Nn1g03289 Nelumbo nucifera HOM05D000007 ORTHO05D000017 9.0e-06 54.7 198 27.3


User provided reference genes

Program Settings