Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 4.3e-139 498.0 261 100.0
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 1.7e-87 326.6 283 63.3
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 8.2e-82 307.8 286 60.1
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 6.9e-81 304.7 282 61.3
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 1.4e-78 297.0 271 62.4
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 1.4e-78 297.0 289 58.8
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 1.6e-77 293.5 287 59.2
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 4.6e-77 292.0 282 60.6
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 7.9e-77 291.2 285 58.2
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 5.1e-76 288.5 284 56.7
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 1.3e-74 283.9 289 57.1
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.7e-74 283.5 287 56.4
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 4.8e-74 282.0 287 55.7
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.1e-73 278.9 287 55.4
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 1.5e-72 276.9 272 57.7
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 8.5e-71 271.2 277 57.0
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 4.2e-70 268.9 273 57.5
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 2.1e-69 266.5 265 54.7
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 2.7e-69 266.2 281 52.7
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 7.9e-69 264.6 287 55.4
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 7.9e-69 264.6 274 55.8
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 1.8e-68 263.5 292 54.1
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.3e-68 263.1 293 53.2
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 2.3e-68 263.1 259 58.3
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 2.6e-67 259.6 286 51.4
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 1.7e-66 256.9 279 52.3
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 2.8e-66 256.1 282 55.0
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 6.3e-66 255.0 258 54.3
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 1.4e-65 253.8 264 55.3
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 4.1e-65 252.3 274 52.9
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 7.0e-65 251.5 285 52.6
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.2e-64 250.8 266 55.3
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 1.2e-64 250.8 269 54.6
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 4.5e-64 248.8 285 49.8
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 7.7e-64 248.1 280 51.8
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.0e-63 247.7 262 53.8
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.7e-63 246.9 266 54.9
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 3.8e-63 245.7 280 51.1
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 7.2e-62 241.5 255 54.5
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 2.7e-61 239.6 258 53.1
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 3.6e-61 239.2 259 52.5
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 8.0e-61 238.0 255 53.7
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.4e-60 237.3 257 52.5
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 1.8e-60 236.9 323 46.4
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 2.3e-60 236.5 290 49.7
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 3.0e-60 236.1 255 53.3
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 8.8e-60 234.6 255 52.5
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 5.7e-59 231.9 270 51.1
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 5.7e-59 231.9 263 51.3
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 9.7e-59 231.1 266 48.1
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 4.8e-58 228.8 270 49.3
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 1.4e-57 227.3 358 44.7
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 2.4e-57 226.5 330 44.8
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 2.4e-57 226.5 274 48.2
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 5.3e-57 225.3 258 51.2
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 7.0e-57 224.9 288 48.6
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 1.6e-56 223.8 266 51.9
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 2.0e-56 223.4 280 48.6
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 4.5e-56 222.2 280 48.6
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 7.7e-56 221.5 281 45.9
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 1.5e-54 217.2 313 44.1
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 5.5e-54 215.3 262 51.1
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.6e-53 213.8 292 45.9
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 8.0e-53 211.5 281 45.9
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 3.4e-51 206.1 283 47.3
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 3.4e-51 206.1 283 47.3
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 3.7e-50 202.6 257 47.5
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 1.8e-49 200.3 297 44.1
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.2e-48 197.6 303 42.6
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 7.7e-48 194.9 257 44.4
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 1.7e-47 193.7 278 46.0
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 1.7e-47 193.7 266 47.7
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.9e-46 190.3 150 67.3
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 8.0e-45 184.9 255 45.1
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 3.0e-44 183.0 241 48.1
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 9.8e-43 177.9 225 45.8
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 4.9e-42 175.6 218 50.0
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 4.1e-41 172.6 240 49.2
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 7.0e-41 171.8 209 48.3
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 9.2e-41 171.4 213 49.8
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 5.9e-40 168.7 196 50.0
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 8.6e-39 164.9 202 49.5
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 5.6e-38 162.2 128 70.3
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.8e-37 159.8 229 43.7
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 6.8e-36 155.2 128 67.2
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 8.9e-36 154.8 340 36.5
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.3e-34 151.0 132 62.1
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 3.7e-34 149.4 142 60.6
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 6.4e-34 148.7 255 40.8
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 1.1e-33 147.9 128 63.3
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 1.4e-33 147.5 270 36.3
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 3.2e-33 146.4 190 45.3
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 7.0e-33 145.2 178 48.3
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.6e-29 134.0 162 47.5
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 8.9e-28 128.3 232 34.5
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 9.8e-27 124.8 170 44.7
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 8.3e-26 121.7 250 36.0
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.9e-25 120.6 105 60.0
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 4.1e-25 119.4 139 46.0
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 5.4e-25 119.0 262 33.2
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 7.0e-25 118.6 202 42.1
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 1.7e-23 114.0 81 75.3
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.3e-23 113.6 86 68.6
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 8.6e-23 111.7 104 55.8
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 1.1e-22 111.3 113 52.2
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 7.3e-22 108.6 115 48.7
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 9.5e-22 108.2 106 52.8
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 3.6e-21 106.3 155 44.5
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 5.2e-20 102.4 109 51.4
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 1.7e-18 97.4 106 52.8
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 3.7e-18 96.3 83 59.0
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.0e-15 88.2 56 75.0
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 3.9e-15 86.3 124 35.5
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 2.1e-13 80.5 80 55.0
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 2.1e-13 80.5 63 61.9
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 3.1e-12 76.6 55 70.9
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 2.0e-11 73.9 56 62.5
Mapoly0161s0026 Marchantia polymorpha HOM05D006511 ORTHO05D007567 4.9e-10 69.3 265 24.2
AagrBONN_evm.TU.Sc2ySwM_362.2028 Anthoceros agrestis HOM05D006511 ORTHO05D007567 1.1e-09 68.2 258 23.6
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 1.4e-09 67.8 44 75.0
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 5.4e-09 65.9 105 40.0
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 7.8e-08 62.0 87 40.2


User provided reference genes

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