Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2935 Trochodendron aralioides HOM05D005424 ORTHO05D006726 6.4e-39 163.7 87 100.0
TAR374G0493 Trochodendron aralioides HOM05D005424 ORTHO05D006726 1.4e-09 66.2 47 78.7
Dinv12891 Davidia involucrata HOM05D005424 ORTHO05D006726 3.1e-09 65.1 47 72.3
Rhsim07G0076500 Rhododendron simsii HOM05D005424 ORTHO05D006726 4.0e-09 64.7 46 73.9
TAR636G1325 Trochodendron aralioides HOM05D005424 ORTHO05D006726 1.2e-08 63.2 45 75.6
vmacro13840 Vaccinium macrocarpon HOM05D005424 ORTHO05D006726 7.6e-08 60.5 46 69.6
CSS0028831 Camellia sinensis var. sinensis HOM05D005424 ORTHO05D006726 9.9e-08 60.1 44 70.5
PSO063G2765 Papaver somniferum HOM05D005424 ORTHO05D006726 1.7e-07 59.3 47 66.0
PSO782G1858 Papaver somniferum HOM05D005424 ORTHO05D006726 2.9e-07 58.5 47 66.0
COL.COLO4_10822 Corchorus olitorius HOM05D005424 ORTHO05D006726 3.8e-07 58.2 45 66.7
Gohir.A12G241300 Gossypium hirsutum HOM05D005424 ORTHO05D006726 3.8e-07 58.2 45 66.7
Gohir.D12G242600 Gossypium hirsutum HOM05D005424 ORTHO05D006726 3.8e-07 58.2 45 66.7
Gorai.008G259800 Gossypium raimondii HOM05D005424 ORTHO05D006726 3.8e-07 58.2 45 66.7
GSVIVG01019675001 Vitis vinifera HOM05D005424 ORTHO05D006726 3.8e-07 58.2 44 75.0
CAN.G567.102 Capsicum annuum HOM05D005424 ORTHO05D006726 4.9e-07 57.8 50 60.0
Peaxi162Scf00074g00151 Petunia axillaris HOM05D005424 ORTHO05D006726 4.9e-07 57.8 50 60.0
Solyc08g083290.4 Solanum lycopersicum HOM05D005424 ORTHO05D006726 6.4e-07 57.4 50 60.0
PGSC0003DMG401012227 Solanum tuberosum HOM05D005424 ORTHO05D006726 6.4e-07 57.4 50 60.0
Ciclev10018587m.g Citrus clementina HOM05D005424 ORTHO05D006726 8.4e-07 57.0 45 64.4
Nitab4.5_0003419g0090 Nicotiana tabacum HOM05D005424 ORTHO05D006726 8.4e-07 57.0 50 58.0
Duzib068G1314 Durio zibethinus HOM05D005424 ORTHO05D006726 1.1e-06 56.6 45 64.4
Nitab4.5_0002520g0100 Nicotiana tabacum HOM05D005424 ORTHO05D006726 1.1e-06 56.6 50 56.0
Prupe.5G132500 Prunus persica HOM05D005424 ORTHO05D006726 1.1e-06 56.6 45 64.4
RcHm_v2.0_Chr7g0187521 Rosa chinensis HOM05D005424 ORTHO05D006726 1.1e-06 56.6 45 62.2
Thecc.03G218200 Theobroma cacao HOM05D005424 ORTHO05D006726 1.1e-06 56.6 45 64.4
Lj5g0003487 Lotus japonicus HOM05D005424 ORTHO05D006726 1.4e-06 56.2 47 59.6
Cfa011902 Carpinus fangiana HOM05D005424 ORTHO05D006726 1.9e-06 55.8 45 64.4
Cc08_g16940 Coffea canephora HOM05D005424 ORTHO05D006726 1.9e-06 55.8 45 62.2
Haze_09196 Corylus avellana HOM05D005424 ORTHO05D006726 1.9e-06 55.8 45 64.4
Sopen08g031500 Solanum pennellii HOM05D005424 ORTHO05D006726 1.9e-06 55.8 50 58.0
Aqoxy7G00007 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 2.4e-06 55.5 44 65.9
Aqoxy8s003 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 2.4e-06 55.5 44 65.9
Manes.01G055600 Manihot esculenta HOM05D005424 ORTHO05D006726 2.4e-06 55.5 47 66.0
CiPaw.11G110500 Carya illinoinensis HOM05D005424 ORTHO05D006726 3.2e-06 55.1 45 64.4
FvH4_5g10620 Fragaria vesca HOM05D005424 ORTHO05D006726 3.2e-06 55.1 45 60.0
FAN18G4434 Fragaria x ananassa HOM05D005424 ORTHO05D006726 3.2e-06 55.1 45 60.0
MBI12_g14812_MAGBIO Magnolia biondii HOM05D005424 ORTHO05D006726 3.2e-06 55.1 46 60.9
Eucgr.D01670 Eucalyptus grandis HOM05D005424 ORTHO05D006726 4.2e-06 54.7 44 63.6
Sc01g0010800 Simmondsia chinensis HOM05D005424 ORTHO05D006726 4.2e-06 54.7 47 61.7
Atru.chr9.1859 Acer truncatum HOM05D005424 ORTHO05D006726 5.4e-06 54.3 46 60.9
MD06G1121800 Malus domestica HOM05D005424 ORTHO05D006726 5.4e-06 54.3 45 57.8
QL02p027371 Quercus lobata HOM05D005424 ORTHO05D006726 5.4e-06 54.3 45 60.0
FAN08G3416 Fragaria x ananassa HOM05D005424 ORTHO05D006726 9.3e-06 53.5 45 57.8


User provided reference genes

Program Settings