Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 1.8e-85 319.3 172 100.0
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 6.7e-40 167.9 156 60.3
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.6e-38 163.3 189 51.9
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.3e-32 143.7 177 52.0
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 1.5e-31 140.2 180 52.8
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.5e-31 139.4 155 52.9
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 5.7e-31 138.3 175 48.6
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 1.6e-30 136.7 151 51.0
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 2.2e-30 136.3 169 50.3
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 2.2e-30 136.3 179 50.8
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 4.8e-30 135.2 177 48.0
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 8.2e-30 134.4 162 48.1
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 8.2e-30 134.4 175 53.7
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 2.4e-29 132.9 174 51.1
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 3.1e-29 132.5 157 53.5
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 3.1e-29 132.5 175 51.4
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 4.1e-29 132.1 189 47.1
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 5.3e-29 131.7 181 47.0
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.5e-28 130.2 140 55.7
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 2.0e-28 129.8 152 53.9
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 2.0e-28 129.8 184 47.3
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 7.6e-28 127.9 185 48.1
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.3e-27 127.1 187 45.5
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 3.8e-27 125.6 150 48.7
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 5.0e-27 125.2 179 45.3
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 8.5e-27 124.4 184 44.6
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 8.5e-27 124.4 158 52.5
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 1.4e-26 123.6 179 46.4
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.2e-26 122.5 187 41.7
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 4.6e-25 118.6 165 47.3
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 4.6e-25 118.6 175 46.3
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 7.9e-25 117.9 153 49.7
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 2.3e-24 116.3 182 42.9
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 8.7e-24 114.4 153 48.4
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.5e-23 113.6 157 49.0
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 1.5e-23 113.6 133 53.4
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 2.5e-23 112.8 186 40.9
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 2.5e-23 112.8 188 40.4
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 3.3e-23 112.5 165 43.0
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 4.3e-23 112.1 175 44.0
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 4.3e-23 112.1 181 43.1
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 7.4e-23 111.3 176 44.3
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 9.7e-23 110.9 151 50.3
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 2.2e-22 109.8 193 39.9
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.8e-22 109.4 177 45.8
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 3.7e-22 109.0 168 40.5
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 6.3e-22 108.2 160 43.1
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.4e-21 107.1 179 39.1
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 1.4e-21 107.1 166 44.0
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 5.3e-21 105.1 161 44.1
TAR383G0638 Trochodendron aralioides HOM05D000726 ORTHO05D000799 6.9e-21 104.8 144 55.6
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.5e-20 103.6 176 44.9
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.5e-20 103.6 179 38.5
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 2.0e-20 103.2 176 40.3
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.0e-20 103.2 176 44.9
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.4e-20 102.4 175 42.3
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 3.4e-20 102.4 178 42.1
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 1.3e-19 100.5 180 39.4
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.3e-19 100.5 161 45.3
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 1.3e-19 100.5 153 43.1
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 1.3e-19 100.5 140 45.7
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 1.7e-19 100.1 172 38.4
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 8.5e-19 97.8 176 39.8
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 8.5e-19 97.8 131 48.1
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 1.4e-18 97.1 176 40.9
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.9e-18 96.7 130 48.5
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.2e-18 94.7 129 43.4
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 4.7e-17 92.0 175 38.9
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 7.9e-17 91.3 175 37.7
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.3e-16 89.7 126 42.9
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 2.3e-16 89.7 194 38.1
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.0e-16 89.4 184 40.8
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 3.0e-16 89.4 172 38.4
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.9e-16 89.0 188 41.0
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 3.9e-16 89.0 188 41.0
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 3.9e-16 89.0 175 40.0
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 5.1e-16 88.6 188 41.0
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 8.8e-16 87.8 184 40.8
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.1e-15 87.4 165 36.4
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 2.0e-15 86.7 138 42.8
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-15 86.3 138 41.3
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 2.6e-15 86.3 102 49.0
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 3.3e-15 85.9 180 37.8
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 4.4e-15 85.5 181 39.2
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 4.4e-15 85.5 161 39.1
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 5.7e-15 85.1 97 54.6
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 7.4e-15 84.7 184 41.3
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 7.4e-15 84.7 172 36.0
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.8e-14 82.8 134 38.8
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 3.7e-14 82.4 184 39.7
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 3.7e-14 82.4 184 39.7
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 3.7e-14 82.4 183 35.0
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 4.8e-14 82.0 182 41.8
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 4.8e-14 82.0 97 52.6
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-13 80.1 97 44.3
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 1.8e-13 80.1 169 39.6
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 2.4e-13 79.7 162 39.5
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 3.1e-13 79.3 176 42.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.5e-12 77.0 154 39.6
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 4.5e-12 75.5 125 38.4
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 5.9e-12 75.1 133 39.8
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 7.7e-12 74.7 127 42.5
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 1.3e-11 73.9 91 46.2
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.3e-11 73.9 179 35.8
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 5.0e-11 72.0 96 43.8
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 1.1e-10 70.9 149 36.9
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 1.1e-10 70.9 72 47.2
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 1.9e-10 70.1 173 31.8
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 2.5e-10 69.7 91 45.1
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 2.5e-10 69.7 144 34.7
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 3.2e-10 69.3 124 40.3
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 9.4e-10 67.8 120 42.5
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 4.7e-09 65.5 75 50.7
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 8.0e-09 64.7 141 37.6
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 1.0e-08 64.3 135 35.6
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 1.4e-08 63.9 162 34.6
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 3.0e-08 62.8 68 58.8
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 5.2e-08 62.0 144 36.8
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.0e-07 60.1 67 52.2
Sc12g0009390 Simmondsia chinensis HOM05D006672 ORTHO05D007769 5.7e-07 58.5 93 44.1
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 2.8e-06 56.2 82 40.2
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 3.7e-06 55.8 142 34.5


User provided reference genes

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