Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.4e-113 411.8 222 100.0
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.2e-91 339.3 222 81.5
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.9e-79 299.7 217 74.7
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.1e-76 290.4 215 75.8
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 5.3e-74 281.6 219 71.2
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.2e-73 280.4 219 70.8
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 5.9e-73 278.1 221 69.7
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 5.9e-73 278.1 206 71.8
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.5e-71 273.5 211 68.2
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 2.1e-70 269.6 222 70.7
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 1.4e-69 266.9 223 67.7
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 1.8e-69 266.5 225 67.1
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 2.3e-69 266.2 215 69.3
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 3.0e-69 265.8 215 67.4
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 4.0e-69 265.4 212 65.1
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 6.8e-69 264.6 221 67.0
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 8.8e-69 264.2 239 64.0
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 2.0e-68 263.1 223 64.1
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.8e-67 258.5 215 64.7
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 8.3e-67 257.7 215 64.2
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 1.1e-66 257.3 221 67.4
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 1.4e-66 256.9 217 68.7
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.1e-66 255.8 228 64.9
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 3.1e-66 255.8 215 62.8
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 4.1e-66 255.4 216 63.9
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 4.1e-66 255.4 209 70.8
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 5.4e-66 255.0 221 67.0
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 9.1e-66 254.2 212 65.1
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.2e-65 253.8 220 65.0
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.2e-65 253.8 215 67.0
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 1.2e-65 253.8 203 70.9
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.2e-65 253.8 223 66.4
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 4.5e-65 251.9 218 62.8
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 5.9e-65 251.5 212 64.6
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.0e-64 250.8 225 66.2
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 2.2e-64 249.6 224 66.1
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 2.9e-64 249.2 216 64.8
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 8.5e-64 247.7 212 63.7
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.1e-63 247.3 204 68.6
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.5e-63 246.9 215 65.6
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 1.9e-63 246.5 189 67.7
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.9e-63 246.5 233 64.4
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 3.2e-63 245.7 205 65.9
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 4.2e-63 245.4 229 64.2
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 7.2e-63 244.6 202 70.3
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 2.1e-62 243.0 270 57.4
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 2.7e-62 242.7 215 63.3
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.7e-62 242.7 224 64.7
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 2.7e-62 242.7 224 61.2
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 3.6e-62 242.3 227 63.9
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.4e-61 240.4 225 60.0
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 2.3e-61 239.6 221 63.3
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 3.0e-61 239.2 208 62.5
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 3.0e-61 239.2 208 62.5
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 3.0e-61 239.2 208 62.5
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 3.0e-61 239.2 223 63.2
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 5.2e-61 238.4 219 61.2
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 6.8e-61 238.0 225 59.6
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 8.8e-61 237.7 222 63.1
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 1.2e-60 237.3 216 63.0
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 1.2e-60 237.3 225 63.1
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.2e-60 237.3 213 62.9
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 2.0e-60 236.5 223 58.7
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 2.0e-60 236.5 210 61.0
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 2.0e-60 236.5 224 61.6
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.4e-60 235.7 188 67.0
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 4.4e-60 235.3 210 60.5
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 7.5e-60 234.6 223 59.2
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 7.5e-60 234.6 223 59.2
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 7.5e-60 234.6 222 62.6
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 9.8e-60 234.2 174 72.4
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 9.8e-60 234.2 174 72.4
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 1.3e-59 233.8 223 59.2
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 2.8e-59 232.6 209 63.2
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 6.3e-59 231.5 206 62.6
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 6.3e-59 231.5 232 60.8
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 8.3e-59 231.1 201 66.2
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.8e-58 229.9 215 58.1
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.4e-58 229.6 214 63.6
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 3.1e-58 229.2 230 60.0
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 4.1e-58 228.8 226 58.0
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 5.4e-58 228.4 239 56.5
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 7.0e-58 228.0 210 63.8
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 1.2e-57 227.3 230 59.1
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 3.5e-57 225.7 177 70.6
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 3.5e-57 225.7 209 57.9
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 5.9e-57 224.9 200 60.5
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 7.7e-57 224.6 224 57.6
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 2.3e-56 223.0 200 60.0
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 8.6e-56 221.1 224 57.1
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 2.5e-55 219.5 255 54.9
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 5.6e-55 218.4 201 60.2
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 2.1e-54 216.5 200 59.5
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 4.7e-54 215.3 225 57.3
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 6.1e-54 214.9 214 57.0
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 1.8e-53 213.4 236 55.5
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 2.3e-53 213.0 220 58.2
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 8.9e-53 211.1 235 53.6
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.7e-51 205.7 177 67.8
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.4e-50 203.0 130 80.0
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 3.2e-50 202.6 219 58.4
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 3.5e-49 199.1 231 50.2
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 5.9e-49 198.4 167 61.7
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 6.6e-48 194.9 208 57.2
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.9e-47 193.4 153 69.3
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 3.3e-47 192.6 168 60.7
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 4.3e-47 192.2 120 82.5
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 2.1e-46 189.9 131 72.5
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 4.0e-45 185.7 138 74.6
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.7e-43 180.3 126 73.0
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 2.2e-43 179.9 130 73.1
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 3.2e-42 176.0 223 48.0
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.2e-42 176.0 154 66.9
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 4.1e-42 175.6 210 54.8
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 7.0e-42 174.9 173 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.6e-41 173.7 165 58.2
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.7e-38 162.2 180 53.9
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 1.5e-36 157.1 132 65.9
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 3.7e-35 152.5 161 57.8
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.1e-34 151.0 166 53.0
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.4e-34 150.6 143 60.8
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 4.7e-30 135.6 163 52.1
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.2e-28 131.0 116 64.7
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 2.6e-28 129.8 108 58.3
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 3.8e-19 99.4 98 59.2
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 1.9e-18 97.1 143 42.7
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 4.3e-15 85.9 217 35.0
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 3.6e-14 82.8 87 55.2
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 2.4e-13 80.1 103 46.6
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.3e-06 57.8 54 55.6


User provided reference genes

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