Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2777 Trochodendron aralioides HOM05D006782 ORTHO05D009662 2.3e-44 181.8 89 100.0
FvH4_5g24910 Fragaria vesca HOM05D006782 ORTHO05D009662 6.8e-12 73.9 89 46.1
Nn1g09299 Nelumbo nucifera HOM05D006782 ORTHO05D009662 8.9e-12 73.6 88 45.5
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 1.5e-11 72.8 86 46.5
FAN18G2623 Fragaria x ananassa HOM05D006782 ORTHO05D009662 1.5e-11 72.8 86 46.5
FAN04G0916 Fragaria x ananassa HOM05D006782 ORTHO05D009662 2.0e-11 72.4 85 47.1
FAN08G2704 Fragaria x ananassa HOM05D006782 ORTHO05D009662 3.4e-11 71.6 86 45.3
Prupe.5G014000 Prunus persica HOM05D006782 ORTHO05D009662 7.5e-11 70.5 88 46.6
QL12p003492 Quercus lobata HOM05D006782 ORTHO05D009662 1.3e-10 69.7 79 48.1
Ciclev10017790m.g Citrus clementina HOM05D006782 ORTHO05D009662 6.3e-10 67.4 79 45.6
Cfa021287 Carpinus fangiana HOM05D006782 ORTHO05D009662 1.8e-09 65.9 87 48.3
Thecc.03G320800 Theobroma cacao HOM05D006782 ORTHO05D009662 1.8e-09 65.9 73 49.3
Duzib205G1200 Durio zibethinus HOM05D006782 ORTHO05D009662 2.4e-09 65.5 89 46.1
Manes.15G184800 Manihot esculenta HOM05D006782 ORTHO05D009662 2.4e-09 65.5 87 47.1
Potri.004G234800 Populus trichocarpa HOM05D008950 ORTHO05D009662 2.4e-09 65.5 88 44.3
Nn3g19129 Nelumbo nucifera HOM05D006782 ORTHO05D009662 4.1e-09 64.7 85 44.7
Atru.chr6.2152 Acer truncatum HOM05D006782 ORTHO05D009662 9.2e-09 63.5 80 50.0
QL12p003438 Quercus lobata HOM05D006782 ORTHO05D009662 9.2e-09 63.5 81 43.2
CiPaw.11G078800 Carya illinoinensis HOM05D006782 ORTHO05D009662 1.2e-08 63.2 84 46.4
Manes.17G001300 Manihot esculenta HOM05D006782 ORTHO05D009662 1.2e-08 63.2 80 46.2
Sabra01G0179500 Salix brachista HOM05D008950 ORTHO05D009662 2.0e-08 62.4 92 42.4
Gohir.D08G169600 Gossypium hirsutum HOM05D006782 ORTHO05D009662 2.7e-08 62.0 87 44.8
Gorai.004G176800 Gossypium raimondii HOM05D006782 ORTHO05D009662 3.5e-08 61.6 89 46.1
Migut.E01380 Erythranthe guttata HOM05D006782 ORTHO05D009662 5.9e-08 60.8 88 44.3
MBI04_g30807_MAGBIO Magnolia biondii HOM05D006782 ORTHO05D009662 5.9e-08 60.8 75 44.0
Gohir.A08G148500 Gossypium hirsutum HOM05D006782 ORTHO05D009662 1.0e-07 60.1 88 40.9
MELO3C010530.2 Cucumis melo HOM05D006782 ORTHO05D009662 1.7e-07 59.3 77 42.9
Haze_07985 Corylus avellana HOM05D006782 ORTHO05D009662 2.9e-07 58.5 38 68.4
Hma1.2p1_0262F.1_g105300 Hydrangea macrophylla HOM05D006782 ORTHO05D009662 6.6e-07 57.4 77 39.0
Lalb_Chr05g0215191 Lupinus albus HOM05D006782 ORTHO05D009662 6.6e-07 57.4 79 40.5
Sed0004700 Sechium edule HOM05D006782 ORTHO05D009662 1.5e-06 56.2 37 62.2
Lj4g0019286 Lotus japonicus HOM05D006782 ORTHO05D009662 1.9e-06 55.8 79 39.2
ClCG11G016150 Citrullus lanatus HOM05D006782 ORTHO05D009662 9.5e-06 53.5 37 62.2


User provided reference genes

Program Settings