Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.0e-53 212.2 109 100.0
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 3.2e-32 141.7 109 69.7
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 2.7e-26 122.1 109 60.6
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 4.5e-26 121.3 109 59.6
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 6.5e-25 117.5 103 63.1
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 6.5e-25 117.5 104 58.7
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 6.5e-25 117.5 104 58.7
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 6.5e-25 117.5 104 58.7
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 8.6e-25 117.1 104 58.7
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 8.6e-25 117.1 111 56.8
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 8.6e-25 117.1 111 56.8
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.5e-24 116.3 107 57.0
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.5e-24 116.3 107 57.0
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 1.5e-24 116.3 109 56.9
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.5e-24 116.3 104 58.7
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.5e-24 116.3 104 57.7
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 1.5e-24 116.3 104 58.7
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 4.2e-24 114.8 108 59.3
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 5.5e-24 114.4 108 58.3
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 7.2e-24 114.0 125 52.0
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 1.2e-23 113.2 109 58.7
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 1.6e-23 112.8 108 55.6
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 1.6e-23 112.8 107 57.9
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 2.8e-23 112.1 103 61.2
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 3.6e-23 111.7 107 57.9
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 4.7e-23 111.3 108 58.3
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 6.1e-23 110.9 108 59.3
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 1.0e-22 110.2 107 56.1
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 1.0e-22 110.2 104 58.7
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 1.8e-22 109.4 106 55.7
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 1.8e-22 109.4 108 58.3
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 1.8e-22 109.4 101 59.4
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 2.3e-22 109.0 102 59.8
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 5.2e-22 107.8 108 56.5
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 5.2e-22 107.8 103 56.3
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 6.8e-22 107.5 102 56.9
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 6.8e-22 107.5 101 58.4
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 1.2e-21 106.7 103 58.3
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 1.2e-21 106.7 107 55.1
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 1.2e-21 106.7 103 56.3
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 2.0e-21 105.9 100 56.0
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 2.6e-21 105.5 107 54.2
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 3.4e-21 105.1 108 50.9
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 4.4e-21 104.8 107 53.3
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 9.8e-21 103.6 88 63.6
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 9.8e-21 103.6 100 57.0
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 1.3e-20 103.2 103 56.3
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 1.7e-20 102.8 104 56.7
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.7e-20 102.8 104 52.9
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 2.2e-20 102.4 108 55.6
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 6.3e-20 100.9 107 53.3
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 6.3e-20 100.9 107 54.2
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 8.3e-20 100.5 110 54.5
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 8.3e-20 100.5 104 53.8
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 1.1e-19 100.1 108 51.9
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 1.8e-19 99.4 110 54.5
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 2.4e-19 99.0 96 55.2
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 3.1e-19 98.6 104 51.0
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 5.4e-19 97.8 87 59.8
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 5.4e-19 97.8 102 52.0
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 5.4e-19 97.8 110 53.6
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 5.4e-19 97.8 86 60.5
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 7.0e-19 97.4 108 50.9
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 7.0e-19 97.4 107 51.4
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 9.2e-19 97.1 108 50.0
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 9.2e-19 97.1 111 49.5
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 1.2e-18 96.7 111 50.5
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 1.2e-18 96.7 111 50.5
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 1.6e-18 96.3 110 51.8
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 2.0e-18 95.9 100 52.0
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 2.7e-18 95.5 110 51.8
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 3.5e-18 95.1 110 50.9
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 3.5e-18 95.1 107 50.5
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 4.5e-18 94.7 90 58.9
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 1.0e-17 93.6 99 50.5
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 1.0e-17 93.6 108 49.1
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 1.0e-17 93.6 93 53.8
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 1.3e-17 93.2 106 50.9
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 1.3e-17 93.2 93 53.8
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 1.7e-17 92.8 90 54.4
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 1.7e-17 92.8 111 48.6
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 2.3e-17 92.4 90 54.4
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 2.3e-17 92.4 110 51.8
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 2.3e-17 92.4 100 51.0
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 2.9e-17 92.0 92 55.4
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 3.8e-17 91.7 95 53.7
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 3.8e-17 91.7 90 54.4
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 3.8e-17 91.7 90 54.4
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 3.8e-17 91.7 86 59.3
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 3.8e-17 91.7 95 53.7
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 6.6e-17 90.9 102 48.0
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 1.1e-16 90.1 111 45.0
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 1.5e-16 89.7 113 46.0
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 1.9e-16 89.4 86 55.8
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 4.3e-16 88.2 109 46.8
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.6e-15 86.3 88 53.4
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 2.1e-15 85.9 109 48.6
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 4.9e-12 74.7 117 40.2
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 1.4e-11 73.2 119 41.2
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 1.6e-10 69.7 94 45.7
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 4.6e-10 68.2 74 50.0
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 1.3e-09 66.6 101 38.6
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 5.0e-09 64.7 86 44.2
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 1.5e-08 63.2 107 38.3
CiPaw.01G076800 Carya illinoinensis HOM05D006960 ORTHO05D008699 3.3e-08 62.0 52 61.5
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 4.7e-07 58.2 54 55.6
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 5.2e-06 54.7 87 37.9
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 5.2e-06 54.7 132 31.8


User provided reference genes

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