Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2520 Trochodendron aralioides HOM05D007010 ORTHO05D008591 1.0e-44 183.3 114 100.0
TAR497G0007 Trochodendron aralioides HOM05D007010 ORTHO05D008591 4.7e-34 147.9 113 72.6
Dinv27969 Davidia involucrata HOM05D007010 ORTHO05D008591 7.8e-21 104.0 113 53.1
Hma1.2p1_0450F.1_g155640 Hydrangea macrophylla HOM05D007010 ORTHO05D008591 1.3e-18 96.7 114 56.1
Dinv23425 Davidia involucrata HOM05D000575 ORTHO05D004448 3.1e-17 92.0 113 50.4
Nn8g38932 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.2e-16 90.1 114 52.6
Nn8g38933 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.2e-16 90.1 114 52.6
Nn8g38936 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.2e-16 90.1 114 52.6
TWI63G1421 Tripterygium wilfordii HOM05D007010 ORTHO05D008591 4.5e-16 88.2 113 48.7
CiPaw.15G041400 Carya illinoinensis HOM05D007010 ORTHO05D008591 6.4e-15 84.3 112 50.0
TAR383G0702 Trochodendron aralioides HOM05D007010 ORTHO05D008591 8.4e-15 84.0 113 51.3
Glyma.07G198700 Glycine max HOM05D007010 ORTHO05D008591 2.1e-13 79.3 117 48.7
Haze_03853 Corylus avellana HOM05D007010 ORTHO05D008591 2.7e-13 79.0 79 58.2
vmacro00158 Vaccinium macrocarpon HOM05D007010 ORTHO05D008591 4.6e-13 78.2 84 52.4
Eucgr.C02362 Eucalyptus grandis HOM05D007010 ORTHO05D008591 3.9e-12 75.1 112 46.4
QL05p000846 Quercus lobata HOM05D007010 ORTHO05D008591 5.1e-12 74.7 79 58.2
Sc09g0009690 Simmondsia chinensis HOM05D007010 ORTHO05D008591 5.1e-12 74.7 113 46.9
ClCG05G017750 Citrullus lanatus HOM05D007010 ORTHO05D008591 8.7e-12 73.9 80 51.2
Ciclev10009901m.g Citrus clementina HOM05D007010 ORTHO05D008591 1.5e-11 73.2 100 46.0
Haze_18208 Corylus avellana HOM05D007010 ORTHO05D008591 1.5e-11 73.2 112 53.6
Oeu018653.1 Olea europaea HOM05D007010 ORTHO05D008591 1.5e-11 73.2 112 43.8
Sabra06G0180200 Salix brachista HOM05D007010 ORTHO05D008591 1.9e-11 72.8 113 47.8
CsaV3_4G035530 Cucumis sativus L. HOM05D007010 ORTHO05D008591 5.6e-11 71.2 80 50.0
Lalb_Chr05g0218511 Lupinus albus HOM05D007010 ORTHO05D008591 7.4e-11 70.9 115 46.1
Lj7P280T30 Lonicera japonica HOM05D007010 ORTHO05D008591 9.6e-11 70.5 115 41.7
Sabra06G0180800 Salix brachista HOM05D007010 ORTHO05D008591 9.6e-11 70.5 114 50.0
Sed0004842 Sechium edule HOM05D007010 ORTHO05D008591 9.6e-11 70.5 80 48.8
Potri.018G056000 Populus trichocarpa HOM05D007010 ORTHO05D008591 1.3e-10 70.1 116 45.7
Rhsim11G0045900 Rhododendron simsii HOM05D007010 ORTHO05D008591 1.3e-10 70.1 85 50.6
Cpa.g.sc7.196 Carica papaya HOM05D007010 ORTHO05D008591 1.6e-10 69.7 115 48.7
Gohir.A06G087901 Gossypium hirsutum HOM05D007010 ORTHO05D008591 1.6e-10 69.7 118 42.4
Gorai.010G102500 Gossypium raimondii HOM05D007010 ORTHO05D008591 1.6e-10 69.7 118 44.1
Lj5g0011556 Lotus japonicus HOM05D007010 ORTHO05D008591 1.6e-10 69.7 115 47.8
Glyma.13G177700 Glycine max HOM05D007010 ORTHO05D008591 2.8e-10 68.9 110 46.4
Thecc.09G051700 Theobroma cacao HOM05D007010 ORTHO05D008591 2.8e-10 68.9 100 46.0
Nitab4.5_0011306g0020 Nicotiana tabacum HOM05D007010 ORTHO05D008591 3.6e-10 68.6 115 40.0
TPR.G16317 Trifolium pratense HOM05D007010 ORTHO05D008591 3.6e-10 68.6 114 42.1
Ca_18571_v3 Cicer arietinum L. HOM05D007010 ORTHO05D008591 4.8e-10 68.2 115 47.0
QL05p001142 Quercus lobata HOM05D007010 ORTHO05D008591 6.2e-10 67.8 79 50.6
THA.LOC104811249 Tarenaya hassleriana HOM05D007010 ORTHO05D008591 1.8e-09 66.2 117 46.2
Oeu037327.1 Olea europaea HOM05D007010 ORTHO05D008591 2.4e-09 65.9 120 40.0
Sopen12g031840 Solanum pennellii HOM05D007010 ORTHO05D008591 2.4e-09 65.9 122 36.1
Solyc12g095940.1 Solanum lycopersicum HOM05D007010 ORTHO05D008591 3.1e-09 65.5 100 40.0
Atru.chr1.3280 Acer truncatum HOM05D007010 ORTHO05D008591 5.3e-09 64.7 112 38.4
CAN.G208.75 Capsicum annuum HOM05D007010 ORTHO05D008591 9.0e-09 63.9 84 42.9
Gohir.D06G088700 Gossypium hirsutum HOM05D007010 ORTHO05D008591 9.0e-09 63.9 118 41.5
Nitab4.5_0000738g0150 Nicotiana tabacum HOM05D007010 ORTHO05D008591 9.0e-09 63.9 84 47.6
SGA_v2.0_scaffold52G19071 Striga asiatica HOM05D007010 ORTHO05D008591 9.0e-09 63.9 105 42.9
Lj4g0022512 Lotus japonicus HOM05D007010 ORTHO05D008591 1.2e-08 63.5 113 36.3
Medtr4g088585 Medicago truncatula HOM05D007010 ORTHO05D008591 1.5e-08 63.2 111 37.8
Potri.006G232200 Populus trichocarpa HOM05D007010 ORTHO05D008591 1.5e-08 63.2 85 56.5
CANSAT56G1710 Cannabis sativa HOM05D007010 ORTHO05D008591 2.0e-08 62.8 84 46.4
MBI06_g20720_MAGBIO Magnolia biondii HOM05D007010 ORTHO05D008591 4.5e-08 61.6 123 46.3
Psat7g115760 Pisum sativum HOM05D007010 ORTHO05D008591 5.8e-08 61.2 113 36.3
ATR0697G019 Amborella trichopoda HOM05D007010 ORTHO05D008591 9.9e-08 60.5 133 39.1
ECA240G3686 Erigeron canadensis HOM05D007010 ORTHO05D008591 9.9e-08 60.5 132 33.3
Thhalv10027214m.g Eutrema salsugineum HOM05D007010 ORTHO05D008591 1.3e-07 60.1 115 37.4
Phvul.002G230000 Phaseolus vulgaris HOM05D007010 ORTHO05D008591 1.3e-07 60.1 116 44.0
Sp7g31830 Schrenkiella parvula HOM05D007010 ORTHO05D008591 1.3e-07 60.1 108 38.9
DCAR_003084 Daucus carota HOM05D007010 ORTHO05D008591 1.7e-07 59.7 82 48.8
Duzib168G1521 Durio zibethinus HOM05D007010 ORTHO05D008591 1.7e-07 59.7 83 54.2
PGSC0003DMG400029388 Solanum tuberosum HOM05D007010 ORTHO05D008591 1.7e-07 59.7 100 37.0
Migut.L00284 Erythranthe guttata HOM05D007010 ORTHO05D008591 2.2e-07 59.3 137 35.8
PSO478G3947 Papaver somniferum HOM05D007010 ORTHO05D008591 2.2e-07 59.3 96 37.5
SalBow2G0398 Salvia bowleyana HOM05D007010 ORTHO05D008591 2.2e-07 59.3 103 39.8
SalBow2G1284 Salvia bowleyana HOM05D007010 ORTHO05D008591 2.2e-07 59.3 103 39.8
Sp6g31840 Schrenkiella parvula HOM05D007010 ORTHO05D008591 2.2e-07 59.3 105 42.9
Ca_08538_v3 Cicer arietinum L. HOM05D007010 ORTHO05D008591 3.8e-07 58.5 108 48.1
SalBow7G3522 Salvia bowleyana HOM05D007010 ORTHO05D008591 8.4e-07 57.4 120 36.7
Hund03353 Selenicereus undatus HOM05D007010 ORTHO05D008591 8.4e-07 57.4 113 40.7
Lsat_1_v5_gn_9_89520 Lactuca sativa HOM05D007010 ORTHO05D008591 1.9e-06 56.2 111 38.7
Cfa017938 Carpinus fangiana HOM05D007010 ORTHO05D008591 2.4e-06 55.8 113 52.2
CDE07G1901 Ceratophyllum demersum HOM05D007010 ORTHO05D008591 2.4e-06 55.8 98 36.7
VMungo0251G3434 Vigna mungo HOM05D007010 ORTHO05D008591 5.5e-06 54.7 119 41.2


User provided reference genes

Program Settings