Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2502 Trochodendron aralioides HOM05D000828 ORTHO05D000623 2.3e-82 308.9 165 100.0
TAR633G1101 Trochodendron aralioides HOM05D000828 ORTHO05D000623 1.2e-14 84.0 71 69.0
Aqoxy2G00857 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 2.1e-14 83.2 66 63.6
Cfa017191 Carpinus fangiana HOM05D000828 ORTHO05D000623 6.0e-14 81.6 70 62.9
Haze_21020 Corylus avellana HOM05D000828 ORTHO05D000623 3.0e-13 79.3 70 61.4
Dinv01495 Davidia involucrata HOM05D000828 ORTHO05D000623 3.0e-13 79.3 76 53.9
PSO339G4904 Papaver somniferum HOM05D000828 ORTHO05D000623 8.7e-13 77.8 78 56.4
Hma1.2p1_0362F.1_g136400 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 7.4e-12 74.7 76 50.0
CiPaw.10G157300 Carya illinoinensis HOM05D000828 ORTHO05D000623 4.8e-11 72.0 76 51.3
Dinv10613 Davidia involucrata HOM05D000828 ORTHO05D000623 8.1e-11 71.2 58 63.8
PSO384G4507 Papaver somniferum HOM05D000828 ORTHO05D000623 1.1e-10 70.9 67 52.2
MD11G1040000 Malus domestica HOM05D000828 ORTHO05D000623 1.4e-10 70.5 71 52.1
FAN08G2417 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.8e-10 70.1 70 51.4
FAN18G2598 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.8e-10 70.1 70 51.4
COL.COLO4_35349 Corchorus olitorius HOM05D000828 ORTHO05D000623 2.4e-10 69.7 67 50.7
PSO339G0646 Papaver somniferum HOM05D000828 ORTHO05D000623 5.3e-10 68.6 67 52.2
PSO384G4235 Papaver somniferum HOM05D000828 ORTHO05D000623 5.3e-10 68.6 69 56.5
TWI74G0856 Tripterygium wilfordii HOM05D000828 ORTHO05D000623 1.2e-09 67.4 58 63.8
QL07p035225 Quercus lobata HOM05D000828 ORTHO05D000623 3.4e-09 65.9 70 48.6
COL.COLO4_12110 Corchorus olitorius HOM05D001914 ORTHO05D000623 4.5e-09 65.5 88 43.2
HanXRQChr07g0203321 Helianthus annuus HOM05D000828 ORTHO05D000623 4.5e-09 65.5 73 49.3
Lsat_1_v5_gn_2_124560 Lactuca sativa HOM05D000828 ORTHO05D000623 4.5e-09 65.5 75 50.7
Solyc09g005610.4 Solanum lycopersicum HOM05D000828 ORTHO05D000623 4.5e-09 65.5 71 50.7
CANSAT35G1227 Cannabis sativa HOM05D000828 ORTHO05D000623 5.8e-09 65.1 77 44.2
Aqoxy4G02526 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 7.6e-09 64.7 69 52.2
Duzib106G0024 Durio zibethinus HOM05D000828 ORTHO05D000623 7.6e-09 64.7 69 46.4
HanXRQChr07g0203231 Helianthus annuus HOM05D000828 ORTHO05D000623 7.6e-09 64.7 73 49.3
TAR625G0688 Trochodendron aralioides HOM05D000828 ORTHO05D000623 7.6e-09 64.7 81 46.9
Lsat_1_v5_gn_5_68961 Lactuca sativa HOM05D000828 ORTHO05D000623 1.0e-08 64.3 72 50.0
Sopen09g001510 Solanum pennellii HOM05D000828 ORTHO05D000623 1.0e-08 64.3 71 50.7
PGSC0003DMG400004453 Solanum tuberosum HOM05D000828 ORTHO05D000623 1.0e-08 64.3 71 49.3
Aqoxy4G02527 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 1.3e-08 63.9 126 38.1
HanXRQChr04g0119221 Helianthus annuus HOM05D000828 ORTHO05D000623 1.3e-08 63.9 73 49.3
Nn2g10340 Nelumbo nucifera HOM05D000828 ORTHO05D000623 1.3e-08 63.9 95 47.4
Peaxi162Scf00170g00008 Petunia axillaris HOM05D000828 ORTHO05D000623 1.3e-08 63.9 73 50.7
Peaxi162Scf00170g00121 Petunia axillaris HOM05D000828 ORTHO05D000623 1.3e-08 63.9 85 45.9
Peaxi162Scf00009g01526 Petunia axillaris HOM05D000828 ORTHO05D000623 1.7e-08 63.5 69 49.3
Gohir.D05G218400 Gossypium hirsutum HOM05D000828 ORTHO05D000623 2.2e-08 63.2 73 45.2
Gorai.009G225400 Gossypium raimondii HOM05D000828 ORTHO05D000623 2.2e-08 63.2 73 45.2
Lsat_1_v5_gn_9_35220 Lactuca sativa HOM05D000828 ORTHO05D000623 2.2e-08 63.2 74 45.9
Sed0016092 Sechium edule HOM05D000828 ORTHO05D000623 2.2e-08 63.2 64 51.6
ClCG10G022260 Citrullus lanatus HOM05D000828 ORTHO05D000623 2.9e-08 62.8 83 48.2
DCAR_024013 Daucus carota HOM05D000828 ORTHO05D000623 2.9e-08 62.8 76 47.4
Manes.18G054150 Manihot esculenta HOM05D000828 ORTHO05D000623 2.9e-08 62.8 69 49.3
Aqoxy6G02454 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 3.8e-08 62.4 64 50.0
CsaV3_3G033620 Cucumis sativus L. HOM05D000828 ORTHO05D000623 3.8e-08 62.4 77 49.4
Atru.chr8.2263 Acer truncatum HOM05D000828 ORTHO05D000623 4.9e-08 62.0 82 46.3
MELO3C009152.2 Cucumis melo HOM05D000828 ORTHO05D000623 4.9e-08 62.0 72 51.4
Lalb_Chr01g0023021 Lupinus albus HOM05D000828 ORTHO05D000623 4.9e-08 62.0 59 54.2
Nn1g01237 Nelumbo nucifera HOM05D000828 ORTHO05D000623 4.9e-08 62.0 60 60.0
Duzib116G0815 Durio zibethinus HOM05D000828 ORTHO05D000623 6.5e-08 61.6 75 42.7
ECA247G1555 Erigeron canadensis HOM05D000828 ORTHO05D000623 6.5e-08 61.6 67 44.8
Migut.F01400 Erythranthe guttata HOM05D000828 ORTHO05D000623 6.5e-08 61.6 63 50.8
Eucgr.F00466 Eucalyptus grandis HOM05D000828 ORTHO05D000623 6.5e-08 61.6 75 46.7
Gohir.A05G215100 Gossypium hirsutum HOM05D000828 ORTHO05D000623 6.5e-08 61.6 67 46.3
Ciclev10012620m.g Citrus clementina HOM05D000828 ORTHO05D000623 8.4e-08 61.2 56 53.6
FAN04G0343 Fragaria x ananassa HOM05D000828 ORTHO05D000623 8.4e-08 61.2 60 51.7
MBI03_g28303_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 8.4e-08 61.2 65 50.8
Nitab4.5_0004107g0060 Nicotiana tabacum HOM05D000828 ORTHO05D000623 8.4e-08 61.2 67 49.3
FvH4_1g25360 Fragaria vesca HOM05D000828 ORTHO05D000623 1.1e-07 60.8 74 45.9
FAN23G1352 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.1e-07 60.8 74 45.9
HanXRQChr01g0017081 Helianthus annuus HOM05D000828 ORTHO05D000623 1.1e-07 60.8 73 49.3
Nitab4.5_0000797g0150 Nicotiana tabacum HOM05D000828 ORTHO05D000623 1.1e-07 60.8 68 48.5
QL10p039976 Quercus lobata HOM05D000828 ORTHO05D000623 1.1e-07 60.8 89 43.8
Actinidia20054 Actinidia chinensis HOM05D000828 ORTHO05D000623 1.4e-07 60.5 74 47.3
FAN26G1171 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.4e-07 60.5 74 45.9
Peaxi162Scf00170g00122 Petunia axillaris HOM05D000828 ORTHO05D000623 1.4e-07 60.5 72 47.2
Prupe.6G279300 Prunus persica HOM05D000828 ORTHO05D000623 1.4e-07 60.5 70 45.7
FvH4_6g11270 Fragaria vesca HOM05D000828 ORTHO05D000623 1.9e-07 60.1 79 43.0
FAN14G0600 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.9e-07 60.1 79 43.0
HanXRQChr15g0464061 Helianthus annuus HOM05D000828 ORTHO05D000623 1.9e-07 60.1 71 40.8
MD04G1155800 Malus domestica HOM05D000828 ORTHO05D000623 1.9e-07 60.1 71 49.3
PSO339G4861 Papaver somniferum HOM05D000828 ORTHO05D000623 1.9e-07 60.1 56 57.1
Cpa.g.sc394.4 Carica papaya HOM05D000828 ORTHO05D000623 3.2e-07 59.3 73 47.9
DCAR_013177 Daucus carota HOM05D000828 ORTHO05D000623 3.2e-07 59.3 64 48.4
HanXRQChr12g0380481 Helianthus annuus HOM05D000828 ORTHO05D000623 3.2e-07 59.3 79 41.8
Lsat_1_v5_gn_2_124540 Lactuca sativa HOM05D000828 ORTHO05D000623 3.2e-07 59.3 77 45.5
Peaxi162Scf00170g00129 Petunia axillaris HOM05D000828 ORTHO05D000623 3.2e-07 59.3 72 47.2
Peaxi162Scf00284g01040 Petunia axillaris HOM05D000828 ORTHO05D000623 3.2e-07 59.3 59 54.2
PGR083G0051 Punica granatum HOM05D000828 ORTHO05D000623 3.2e-07 59.3 70 47.1
Sc01g0006330 Simmondsia chinensis HOM05D000828 ORTHO05D000623 3.2e-07 59.3 65 46.2
Aqoxy1G03794 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 4.2e-07 58.9 67 49.3
CARHR010070 Cardamine hirsuta HOM05D000828 ORTHO05D000623 4.2e-07 58.9 72 43.1
FAN14G2316 Fragaria x ananassa HOM05D003017 ORTHO05D003388 4.2e-07 58.9 79 41.8
arahy.Tifrunner.gnm1.ann1.BC7D9W Arachis hypogaea HOM05D000828 ORTHO05D000623 5.5e-07 58.5 67 47.8
CAN.G133.9 Capsicum annuum HOM05D000828 ORTHO05D000623 5.5e-07 58.5 71 43.7
Cc06_g01190 Coffea canephora HOM05D000828 ORTHO05D000623 5.5e-07 58.5 73 47.9
ECA248G0624 Erigeron canadensis HOM05D000828 ORTHO05D000623 5.5e-07 58.5 72 48.6
Lsat_1_v5_gn_1_80561 Lactuca sativa HOM05D000828 ORTHO05D000623 5.5e-07 58.5 73 49.3
Lj1g0006880 Lotus japonicus HOM05D000828 ORTHO05D000623 5.5e-07 58.5 52 55.8
Oeu059142.1 Olea europaea HOM05D000828 ORTHO05D000623 5.5e-07 58.5 68 45.6
Sc07g0002470 Simmondsia chinensis HOM05D000828 ORTHO05D000623 5.5e-07 58.5 59 49.2
Aqoxy1G03791 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 7.1e-07 58.2 64 50.0
EL10Ac1g02303 Beta vulgaris HOM05D000828 ORTHO05D000623 7.1e-07 58.2 69 46.4
HanXRQChr15g0468941 Helianthus annuus HOM05D000828 ORTHO05D000623 7.1e-07 58.2 71 47.9
Peaxi162Scf00626g00026 Petunia axillaris HOM05D000828 ORTHO05D000623 7.1e-07 58.2 67 46.3
Prupe.1G542200 Prunus persica HOM05D000828 ORTHO05D000623 7.1e-07 58.2 72 45.8
RcHm_v2.0_Chr3g0462811 Rosa chinensis HOM05D000828 ORTHO05D000623 7.1e-07 58.2 75 45.3
TWI36G1300 Tripterygium wilfordii HOM05D000828 ORTHO05D000623 7.1e-07 58.2 72 43.1
Ah.06g188610 Amaranthus hybridus HOM05D000828 ORTHO05D000623 9.3e-07 57.8 71 42.3
AUR62000546 Chenopodium quinoa HOM05D000828 ORTHO05D000623 9.3e-07 57.8 64 50.0
Lsat_1_v5_gn_1_80521 Lactuca sativa HOM05D000828 ORTHO05D000623 9.3e-07 57.8 74 45.9
MD03G1243800 Malus domestica HOM05D000828 ORTHO05D000623 9.3e-07 57.8 57 50.9
PSO528G0190 Papaver somniferum HOM05D000828 ORTHO05D000623 9.3e-07 57.8 68 45.6
Sp2g10750 Schrenkiella parvula HOM05D000828 ORTHO05D000623 9.3e-07 57.8 74 48.6
Thecc.05G013800 Theobroma cacao HOM05D000828 ORTHO05D000623 9.3e-07 57.8 63 42.9
Aqoxy1G03792 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 1.2e-06 57.4 64 48.4
Cpa.g.sc37.34 Carica papaya HOM05D000828 ORTHO05D000623 1.2e-06 57.4 62 48.4
CiPaw.09G210800 Carya illinoinensis HOM05D000828 ORTHO05D000623 1.2e-06 57.4 68 48.5
HanXRQChr15g0468961 Helianthus annuus HOM05D000828 ORTHO05D000623 1.2e-06 57.4 90 42.2
Prupe.4G164300 Prunus persica HOM05D000828 ORTHO05D000623 1.2e-06 57.4 59 47.5
Sc16g0009650 Simmondsia chinensis HOM05D000828 ORTHO05D000623 1.2e-06 57.4 80 43.8
vmacro12769 Vaccinium macrocarpon HOM05D000828 ORTHO05D000623 1.2e-06 57.4 81 45.7
AL1G20580 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 1.6e-06 57.0 70 42.9
CiPaw.03G116000 Carya illinoinensis HOM05D000828 ORTHO05D000623 1.6e-06 57.0 104 38.5
CiPaw.04G077600 Carya illinoinensis HOM05D000828 ORTHO05D000623 1.6e-06 57.0 77 41.6
AUR62006898 Chenopodium quinoa HOM05D000828 ORTHO05D000623 1.6e-06 57.0 77 40.3
ECA233G2612 Erigeron canadensis HOM05D000828 ORTHO05D000623 1.6e-06 57.0 72 44.4
FAN05G4803 Fragaria x ananassa HOM05D003017 ORTHO05D003388 1.6e-06 57.0 65 47.7
HanXRQChr06g0183741 Helianthus annuus HOM05D000828 ORTHO05D000623 1.6e-06 57.0 90 41.1
HanXRQChr15g0476241 Helianthus annuus HOM05D000828 ORTHO05D000623 1.6e-06 57.0 90 41.1
HanXRQChr15g0476251 Helianthus annuus HOM05D000828 ORTHO05D000623 1.6e-06 57.0 90 41.1
VMungo1383G2197 Vigna mungo HOM05D000828 ORTHO05D000623 1.6e-06 57.0 64 43.8
FAN02G1375 Fragaria x ananassa HOM05D003017 ORTHO05D003388 2.1e-06 56.6 59 49.2
Glyma.07G151600 Glycine max HOM05D000828 ORTHO05D000623 2.1e-06 56.6 61 45.9
Lsat_1_v5_gn_1_80501 Lactuca sativa HOM05D000828 ORTHO05D000623 2.1e-06 56.6 72 45.8
Lj4C80T3 Lonicera japonica HOM05D000828 ORTHO05D000623 2.1e-06 56.6 69 44.9
arahy.Tifrunner.gnm1.ann1.5PG8C6 Arachis hypogaea HOM05D000828 ORTHO05D000623 2.7e-06 56.2 78 43.6
Nitab4.5_0014144g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 2.7e-06 56.2 71 45.1
Aqoxy4G02525 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 3.5e-06 55.8 103 38.8
BcaC06g31511 Brassica carinata HOM05D000828 ORTHO05D000623 3.5e-06 55.8 65 47.7
BraA06t27494Z Brassica rapa HOM05D000828 ORTHO05D000623 3.5e-06 55.8 65 47.7
Ciclev10002078m.g Citrus clementina HOM05D000828 ORTHO05D000623 3.5e-06 55.8 76 42.1
DCAR_018692 Daucus carota HOM05D000828 ORTHO05D000623 3.5e-06 55.8 67 44.8
MBI07_g09557_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 3.5e-06 55.8 73 41.1
Rhsim10G0129100 Rhododendron simsii HOM05D000828 ORTHO05D000623 3.5e-06 55.8 80 43.8
Aa31LG1G4930 Aethionema arabicum HOM05D000828 ORTHO05D000623 4.6e-06 55.5 72 41.7
Carub.0008s0213 Capsella rubella HOM05D000828 ORTHO05D000623 4.6e-06 55.5 65 47.7
FvH4_1g25300 Fragaria vesca HOM05D000828 ORTHO05D000623 4.6e-06 55.5 67 44.8
Lalb_Chr19g0124611 Lupinus albus HOM05D000828 ORTHO05D000623 4.6e-06 55.5 61 44.3
Phvul.009G114600 Phaseolus vulgaris HOM05D000828 ORTHO05D000623 4.6e-06 55.5 69 43.5
PGSC0003DMG400004967 Solanum tuberosum HOM05D000828 ORTHO05D000623 4.6e-06 55.5 90 40.0
Atru.chr4.1104 Acer truncatum HOM05D000828 ORTHO05D000623 6.0e-06 55.1 81 40.7
Haze_25349 Corylus avellana HOM05D000828 ORTHO05D000623 6.0e-06 55.1 71 40.8
Eucgr.H05080 Eucalyptus grandis HOM05D000828 ORTHO05D000623 6.0e-06 55.1 84 44.0
Gohir.D11G327100 Gossypium hirsutum HOM05D000828 ORTHO05D000623 6.0e-06 55.1 76 39.5
Oeu037850.1 Olea europaea HOM05D000828 ORTHO05D000623 6.0e-06 55.1 87 37.9
Oeu054389.1 Olea europaea HOM05D000828 ORTHO05D000623 6.0e-06 55.1 70 50.0
Phvul.008G097900 Phaseolus vulgaris HOM05D000828 ORTHO05D000623 6.0e-06 55.1 64 45.3
Prupe.4G280800 Prunus persica HOM05D000828 ORTHO05D000623 6.0e-06 55.1 76 42.1
BcaC06g34393 Brassica carinata HOM05D000828 ORTHO05D000623 7.9e-06 54.7 65 46.2
C07p29120 Brassica napus HOM05D000828 ORTHO05D000623 7.9e-06 54.7 65 46.2
BolC7t43454H Brassica oleracea HOM05D000828 ORTHO05D000623 7.9e-06 54.7 65 46.2
BraA09t37802Z Brassica rapa HOM05D000828 ORTHO05D000623 7.9e-06 54.7 65 47.7
AUR62000547 Chenopodium quinoa HOM05D000828 ORTHO05D000623 7.9e-06 54.7 83 38.6
DCAR_028859 Daucus carota HOM05D000828 ORTHO05D000623 7.9e-06 54.7 79 34.2
Migut.A00656 Erythranthe guttata HOM05D000828 ORTHO05D000623 7.9e-06 54.7 65 43.1
Migut.H00833 Erythranthe guttata HOM05D000828 ORTHO05D000623 7.9e-06 54.7 73 45.2
FAN26G1761 Fragaria x ananassa HOM05D000828 ORTHO05D000623 7.9e-06 54.7 68 44.1
FAN26G2657 Fragaria x ananassa HOM05D000828 ORTHO05D000623 7.9e-06 54.7 68 44.1
Hma1.2p1_0134F.1_g061590 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 7.9e-06 54.7 70 45.7
MD12G1170000 Malus domestica HOM05D000828 ORTHO05D000623 7.9e-06 54.7 68 44.1
Phvul.002G275400 Phaseolus vulgaris HOM05D000828 ORTHO05D000623 7.9e-06 54.7 91 39.6
TAR628G1544 Trochodendron aralioides HOM05D000828 ORTHO05D000623 7.9e-06 54.7 67 44.8


User provided reference genes

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