Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 1.1e-41 172.9 90 100.0
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.7e-26 122.5 83 77.1
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 5.4e-25 117.5 80 75.0
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.2e-24 116.3 84 70.2
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 2.7e-24 115.2 84 71.4
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.5e-24 114.8 84 70.2
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 6.0e-24 114.0 84 70.2
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 7.8e-24 113.6 84 70.2
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.0e-23 113.2 84 70.2
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.0e-23 113.2 84 73.8
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 1.0e-23 113.2 80 72.5
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.3e-23 112.8 84 71.4
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.3e-23 112.8 81 70.4
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 1.7e-23 112.5 82 73.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 2.3e-23 112.1 85 67.1
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 5.1e-23 110.9 83 68.7
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 8.6e-23 110.2 83 68.7
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 8.6e-23 110.2 81 70.4
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 1.1e-22 109.8 81 67.9
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 1.5e-22 109.4 84 66.7
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.5e-22 109.4 84 64.3
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.9e-22 109.0 80 68.8
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 1.9e-22 109.0 88 62.5
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.3e-22 108.2 78 70.5
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 3.3e-22 108.2 85 68.2
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 4.3e-22 107.8 80 68.8
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 4.3e-22 107.8 80 68.8
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.3e-22 107.8 85 68.2
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 4.3e-22 107.8 83 67.5
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 5.6e-22 107.5 84 65.5
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 5.6e-22 107.5 84 67.9
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 7.3e-22 107.1 81 66.7
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 9.5e-22 106.7 84 63.1
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 9.5e-22 106.7 79 68.4
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 1.2e-21 106.3 84 65.5
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 1.2e-21 106.3 79 70.9
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 1.6e-21 105.9 82 67.1
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 1.6e-21 105.9 82 67.1
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.6e-21 105.9 85 64.7
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.6e-21 105.9 78 70.5
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 1.6e-21 105.9 84 66.7
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 2.1e-21 105.5 83 61.4
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 2.8e-21 105.1 78 69.2
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 2.8e-21 105.1 78 69.2
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 2.8e-21 105.1 83 63.9
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 3.6e-21 104.8 85 65.9
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 3.6e-21 104.8 85 67.1
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 6.2e-21 104.0 78 66.7
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 6.2e-21 104.0 78 66.7
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.4e-20 102.8 78 69.2
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 1.4e-20 102.8 84 63.1
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 1.8e-20 102.4 84 63.1
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.4e-20 102.1 84 64.3
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 3.1e-20 101.7 78 66.7
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 4.0e-20 101.3 83 63.9
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 5.2e-20 100.9 84 65.5
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 6.8e-20 100.5 84 63.1
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 6.8e-20 100.5 84 63.1
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 8.9e-20 100.1 84 61.9
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.2e-19 99.8 82 63.4
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.6e-19 98.6 70 71.4
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 3.4e-19 98.2 84 61.9
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 7.6e-19 97.1 75 64.0
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 9.9e-19 96.7 83 62.7
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.3e-18 96.3 79 63.3
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 1.3e-18 96.3 85 60.0
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 1.3e-18 96.3 85 60.0
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.3e-18 96.3 72 68.1
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 2.9e-18 95.1 84 60.7
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 2.9e-18 95.1 84 60.7
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 2.9e-18 95.1 84 60.7
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 2.9e-18 95.1 82 61.0
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 4.9e-18 94.4 75 64.0
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 6.4e-18 94.0 85 60.0
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 8.4e-18 93.6 85 58.8
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 8.4e-18 93.6 84 59.5
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 8.4e-18 93.6 84 59.5
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 1.1e-17 93.2 81 61.7
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 1.4e-17 92.8 81 61.7
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 1.9e-17 92.4 84 58.3
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.4e-17 92.0 69 68.1
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 4.6e-16 87.8 82 59.8
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 6.0e-16 87.4 85 56.5
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.0e-15 86.7 66 66.7
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 6.6e-15 84.0 84 54.8
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 8.7e-15 83.6 71 62.0
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 3.3e-14 81.6 84 53.6
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 5.6e-14 80.9 84 50.0
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 9.6e-14 80.1 71 60.6
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.2e-13 79.7 81 56.8
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.6e-13 78.2 74 59.5
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 6.2e-13 77.4 84 48.8
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 1.1e-12 76.6 38 97.4
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.4e-12 76.3 76 56.6
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 5.3e-12 74.3 62 62.9
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 6.9e-12 73.9 81 54.3
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 9.0e-12 73.6 79 54.4
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.2e-11 73.2 58 63.8
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.5e-11 72.8 81 50.6
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 5.8e-11 70.9 51 68.6
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 5.8e-11 70.9 54 63.0
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 9.9e-11 70.1 61 60.7
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 6.4e-10 67.4 55 61.8
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 8.4e-10 67.0 82 47.6
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 9.3e-09 63.5 78 46.2
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 1.2e-08 63.2 59 62.7
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 3.0e-07 58.5 58 58.6


User provided reference genes

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