Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 3.4e-211 738.0 359 100.0
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.9e-137 493.0 358 72.1
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 7.7e-107 391.3 377 57.8
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 9.2e-92 341.3 359 56.3
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 4.6e-91 339.0 367 53.7
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 2.3e-87 326.6 346 53.8
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 3.7e-85 319.3 347 52.2
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 7.0e-84 315.1 352 52.3
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 5.2e-79 298.9 374 48.1
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 1.4e-76 290.8 361 49.0
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 9.2e-76 288.1 352 50.3
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 3.3e-73 279.6 346 49.4
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 1.8e-71 273.9 319 53.3
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 5.4e-68 262.3 366 46.7
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 2.5e-65 253.4 359 45.1
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 2.5e-65 253.4 335 46.6
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 9.9e-62 241.5 340 45.6
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 1.3e-61 241.1 347 43.8
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.7e-59 233.4 348 42.8
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 2.7e-59 233.4 351 43.3
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 7.8e-59 231.9 348 42.5
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 5.1e-58 229.2 347 43.5
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 1.9e-57 227.3 349 44.1
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 1.9e-57 227.3 322 44.7
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 9.6e-57 224.9 351 42.2
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 4.8e-56 222.6 340 42.6
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 9.0e-55 218.4 352 41.8
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 8.4e-53 211.8 338 42.9
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 5.4e-52 209.1 341 39.3
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 6.7e-50 202.2 332 39.8
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 1.1e-49 201.4 344 39.8
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 2.5e-49 200.3 360 37.8
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 2.5e-49 200.3 235 47.2
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 1.7e-45 187.6 355 36.9
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 1.7e-45 187.6 157 63.7
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 2.9e-45 186.8 354 36.7
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 6.5e-45 185.7 269 41.6
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 1.4e-44 184.5 354 36.4
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 3.2e-44 183.3 284 41.2
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.2e-43 181.4 355 39.2
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 3.9e-42 176.4 355 39.4
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 6.2e-40 169.1 188 48.4
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 2.0e-38 164.1 352 36.4
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 2.7e-35 153.7 342 35.4
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 3.9e-26 123.2 192 43.2
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 3.3e-25 120.2 297 30.6
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 1.1e-23 115.2 92 57.6
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.8e-23 114.4 187 35.3
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.8e-23 114.4 187 35.3
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.3e-21 108.2 79 69.6
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.2e-21 107.5 184 36.4
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 8.5e-21 105.5 182 39.0
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 4.2e-20 103.2 342 29.2
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 2.0e-17 94.4 125 47.2
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 1.3e-16 91.7 189 32.8
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 1.8e-15 87.8 136 39.7
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 3.1e-15 87.0 241 30.3
CSS0016699 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.2e-14 85.1 138 44.2
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 1.5e-14 84.7 199 31.2
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 6.5e-13 79.3 116 46.6
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 1.5e-12 78.2 187 31.0
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 1.5e-12 78.2 114 41.2
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 5.5e-12 76.3 65 64.6
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 1.6e-11 74.7 194 25.3
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 2.1e-11 74.3 65 64.6
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 2.1e-11 74.3 65 64.6
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 6.1e-11 72.8 63 57.1
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 1.0e-10 72.0 65 60.0
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 1.0e-10 72.0 111 32.4
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 3.0e-10 70.5 191 28.8
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 5.2e-10 69.7 203 28.6
DCAR_027433 Daucus carota HOM05D008196 ORTHO05D010261 5.2e-10 69.7 59 52.5
DCAR_031984 Daucus carota HOM05D008196 ORTHO05D010261 5.2e-10 69.7 59 52.5
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 2.0e-09 67.8 184 29.9
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 4.4e-09 66.6 180 25.0
CSS0003728 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 4.4e-09 66.6 50 56.0
Sopen01g028750 Solanum pennellii HOM05D003060 ORTHO05D001716 5.7e-09 66.2 109 33.0
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 2.2e-08 64.3 177 27.1
Solyc01g067040.2 Solanum lycopersicum HOM05D003060 ORTHO05D001716 2.2e-08 64.3 117 29.9
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 1.1e-07 62.0 236 28.4
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.8e-07 61.2 180 27.2
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 1.8e-07 61.2 188 24.5
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 1.8e-07 61.2 227 22.5
unitig_746.g26861 Utricularia gibba HOM05D003060 ORTHO05D001716 1.8e-07 61.2 83 31.3
CSS0018788 Camellia sinensis var. sinensis HOM05D003060 ORTHO05D001716 2.4e-07 60.8 87 34.5
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 3.1e-07 60.5 180 27.2
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 4.1e-07 60.1 118 27.1
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 4.1e-07 60.1 180 27.2
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.1e-07 60.1 180 27.2
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 5.3e-07 59.7 204 26.0
unitig_749.g13558 Utricularia gibba HOM05D003060 ORTHO05D001716 5.3e-07 59.7 84 33.3
Atru.chr2.14 Acer truncatum HOM05D003060 ORTHO05D001716 7.0e-07 59.3 105 31.4
Oeu010912.1 Olea europaea HOM05D003060 ORTHO05D001716 7.0e-07 59.3 115 32.2
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 9.1e-07 58.9 110 31.8
PGSC0003DMG400022663 Solanum tuberosum HOM05D003060 ORTHO05D001716 1.2e-06 58.5 93 33.3
AUR62018747 Chenopodium quinoa HOM05D000855 ORTHO05D001716 1.6e-06 58.2 140 30.0
Ah.07g200100 Amaranthus hybridus HOM05D000855 ORTHO05D001716 2.6e-06 57.4 103 34.0
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 2.6e-06 57.4 180 32.2
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 2.6e-06 57.4 192 23.4
Peaxi162Scf00037g00924 Petunia axillaris HOM05D003060 ORTHO05D001716 2.6e-06 57.4 67 37.3
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 2.6e-06 57.4 202 27.2
Sabra05G0032100 Salix brachista HOM05D003060 ORTHO05D001716 2.6e-06 57.4 103 32.0
SalBow7G2475 Salvia bowleyana HOM05D003060 ORTHO05D001716 2.6e-06 57.4 166 27.1
MBI19_g13125_MAGBIO Magnolia biondii HOM05D003060 ORTHO05D001716 4.5e-06 56.6 138 27.5
TAR362G0619 Trochodendron aralioides HOM05D003060 ORTHO05D001716 4.5e-06 56.6 108 30.6
Duzib211G0658 Durio zibethinus HOM05D003060 ORTHO05D001716 5.9e-06 56.2 85 34.1
Nitab4.5_0002344g0090 Nicotiana tabacum HOM05D003060 ORTHO05D001716 5.9e-06 56.2 67 37.3
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 5.9e-06 56.2 168 25.0
SalBow3G3371 Salvia bowleyana HOM05D003060 ORTHO05D001716 5.9e-06 56.2 67 38.8


User provided reference genes

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