Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2435 Trochodendron aralioides HOM05D001207 ORTHO05D009015 6.0e-194 680.6 340 100.0
Nn8g39732 Nelumbo nucifera HOM05D001207 ORTHO05D009015 3.5e-165 585.1 340 85.0
TWI34G1792 Tripterygium wilfordii HOM05D001207 ORTHO05D009015 1.9e-163 579.3 340 83.2
Rhsim03G0254100 Rhododendron simsii HOM05D001207 ORTHO05D009015 1.2e-160 570.1 337 82.8
vmacro06110 Vaccinium macrocarpon HOM05D001207 ORTHO05D009015 1.2e-160 570.1 339 82.3
Prupe.7G253500 Prunus persica HOM05D001207 ORTHO05D009015 2.4e-158 562.4 338 81.7
QL02p091447 Quercus lobata HOM05D001207 ORTHO05D009015 9.1e-158 560.5 338 80.8
CSS0026722 Camellia sinensis var. sinensis HOM05D001207 ORTHO05D009015 2.7e-157 558.9 340 80.6
Thecc.09G142600 Theobroma cacao HOM05D001207 ORTHO05D009015 4.5e-157 558.1 339 81.4
Manes.14G139700 Manihot esculenta HOM05D001207 ORTHO05D009015 1.1e-155 553.5 340 80.0
Gohir.A06G048800 Gossypium hirsutum HOM05D001207 ORTHO05D009015 1.5e-155 553.1 339 79.9
Gorai.010G054600 Gossypium raimondii HOM05D001207 ORTHO05D009015 3.2e-155 552.0 339 79.6
Ciclev10007794m.g Citrus clementina HOM05D001207 ORTHO05D009015 7.2e-155 550.8 338 79.3
Dinv43194 Davidia involucrata HOM05D001207 ORTHO05D009015 7.2e-155 550.8 339 81.7
Duzib168G0412 Durio zibethinus HOM05D001207 ORTHO05D009015 1.2e-154 550.1 340 80.9
Atru.chr7.251 Acer truncatum HOM05D001207 ORTHO05D009015 1.6e-154 549.7 341 78.3
Cfa020877 Carpinus fangiana HOM05D001207 ORTHO05D009015 2.7e-154 548.9 340 79.4
Aqoxy7G02296 Aquilegia oxysepala HOM05D001207 ORTHO05D009015 3.6e-154 548.5 338 79.6
CiPaw.16G117200 Carya illinoinensis HOM05D001207 ORTHO05D009015 4.7e-154 548.1 332 79.5
PSO017G4960 Papaver somniferum HOM05D001207 ORTHO05D009015 1.0e-153 547.0 339 79.4
CSS0029501 Camellia sinensis var. sinensis HOM05D001207 ORTHO05D009015 1.4e-153 546.6 332 80.7
Gohir.D06G048500 Gossypium hirsutum HOM05D001207 ORTHO05D009015 1.4e-153 546.6 339 79.4
FAN26G2247 Fragaria x ananassa HOM05D001207 ORTHO05D009015 3.0e-153 545.4 339 78.2
RcHm_v2.0_Chr2g0086531 Rosa chinensis HOM05D001207 ORTHO05D009015 3.0e-153 545.4 339 78.2
CANSAT11G0601 Cannabis sativa HOM05D001207 ORTHO05D009015 5.2e-153 544.7 338 79.3
COL.COLO4_24082 Corchorus olitorius HOM05D001207 ORTHO05D009015 5.2e-153 544.7 339 79.4
FAN23G1325 Fragaria x ananassa HOM05D001207 ORTHO05D009015 6.8e-153 544.3 339 77.6
FvH4_1g01570 Fragaria vesca HOM05D000238 ORTHO05D009015 1.2e-152 543.5 339 78.2
Haze_19308 Corylus avellana HOM05D001207 ORTHO05D009015 1.5e-152 543.1 340 78.2
Potri.018G113400 Populus trichocarpa HOM05D001207 ORTHO05D009015 2.6e-152 542.3 340 77.9
CAN.G551.23 Capsicum annuum HOM05D001207 ORTHO05D009015 5.7e-152 541.2 340 78.5
Dinv42907 Davidia involucrata HOM05D001207 ORTHO05D009015 1.7e-151 539.7 332 81.6
Solyc12g010380.3 Solanum lycopersicum HOM05D001207 ORTHO05D009015 2.8e-151 538.9 340 78.8
Lj9A710G64 Lonicera japonica HOM05D001207 ORTHO05D009015 8.3e-151 537.3 337 78.9
Medtr2g461290 Medicago truncatula HOM05D001207 ORTHO05D009015 1.1e-150 537.0 337 78.0
GSVIVG01001035001 Vitis vinifera HOM05D001207 ORTHO05D009015 1.1e-150 537.0 395 70.6
Sopen12g005390 Solanum pennellii HOM05D001207 ORTHO05D009015 1.4e-150 536.6 340 78.2
Eucgr.C00416 Eucalyptus grandis HOM05D001207 ORTHO05D009015 2.4e-150 535.8 339 77.3
Glyma.09G096800 Glycine max HOM05D001207 ORTHO05D009015 5.4e-150 534.6 339 77.6
TPR.G22801 Trifolium pratense HOM05D001207 ORTHO05D009015 5.4e-150 534.6 338 78.4
Ca_03887_v3 Cicer arietinum L. HOM05D001207 ORTHO05D009015 7.0e-150 534.3 340 77.9
MD02G1012500 Malus domestica HOM05D001207 ORTHO05D009015 9.1e-150 533.9 340 78.8
Lalb_Chr23g0275791 Lupinus albus HOM05D001207 ORTHO05D009015 1.2e-149 533.5 340 77.1
Phvul.009G208900 Phaseolus vulgaris HOM05D001207 ORTHO05D009015 1.2e-149 533.5 340 77.1
Glyma.15G203100 Glycine max HOM05D001207 ORTHO05D009015 1.6e-149 533.1 339 77.0
VMungo1309G0472 Vigna mungo HOM05D001207 ORTHO05D009015 2.0e-149 532.7 341 77.4
Sed0001389 Sechium edule HOM05D001207 ORTHO05D009015 1.0e-148 530.4 336 77.4
FAN19G3000 Fragaria x ananassa HOM05D001207 ORTHO05D009015 5.0e-148 528.1 332 77.7
arahy.Tifrunner.gnm1.ann1.TBA1JX Arachis hypogaea HOM05D001207 ORTHO05D009015 8.6e-148 527.3 347 75.2
arahy.Tifrunner.gnm1.ann1.HFL4GJ Arachis hypogaea HOM05D001207 ORTHO05D009015 1.1e-147 526.9 347 75.2
PGR142G3550 Punica granatum HOM05D001207 ORTHO05D009015 1.1e-147 526.9 337 77.7
MSTRG.26312 Avicennia marina HOM05D001207 ORTHO05D009015 5.5e-147 524.6 340 76.5
SGA_v2.0_scaffold183G39863 Striga asiatica HOM05D001207 ORTHO05D009015 3.6e-146 521.9 340 77.1
FAN28G1069 Fragaria x ananassa HOM05D000238 ORTHO05D009015 4.7e-146 521.5 322 79.2
Lj5g0002827 Lotus japonicus HOM05D001207 ORTHO05D009015 8.0e-146 520.8 331 75.8
Migut.K00366 Erythranthe guttata HOM05D001207 ORTHO05D009015 4.0e-145 518.5 341 76.5
Peaxi162Scf00177g00814 Petunia axillaris HOM05D001207 ORTHO05D009015 4.0e-145 518.5 359 73.8
CsaV3_2G003460 Cucumis sativus L. HOM05D001207 ORTHO05D009015 3.4e-144 515.4 338 74.3
MELO3C004452.2 Cucumis melo HOM05D001207 ORTHO05D009015 5.7e-144 514.6 338 74.0
ECA234G4327 Erigeron canadensis HOM05D001207 ORTHO05D009015 9.8e-144 513.8 339 74.3
Ah.11g040880 Amaranthus hybridus HOM05D001207 ORTHO05D009015 1.7e-143 513.1 339 75.5
Oeu040777.3 Olea europaea HOM05D001207 ORTHO05D009015 2.2e-143 512.7 359 72.4
ClCG11G003640 Citrullus lanatus HOM05D001207 ORTHO05D009015 4.9e-143 511.5 355 71.3
Nitab4.5_0001751g0080 Nicotiana tabacum HOM05D001207 ORTHO05D009015 1.8e-142 509.6 324 78.4
Nitab4.5_0005330g0050 Nicotiana tabacum HOM05D001207 ORTHO05D009015 4.1e-142 508.4 323 78.6
ATR0629G027 Amborella trichopoda HOM05D001207 ORTHO05D009015 2.7e-141 505.8 333 74.2
DCAR_019349 Daucus carota HOM05D001207 ORTHO05D009015 1.3e-140 503.4 334 74.9
EL10Ac8g18828 Beta vulgaris HOM05D001207 ORTHO05D009015 1.7e-140 503.1 362 71.5
Sabra18G0096400 Salix brachista HOM05D000238 ORTHO05D001889 8.6e-140 500.7 355 70.7
Lsat_1_v5_gn_5_90580 Lactuca sativa HOM05D001207 ORTHO05D009015 1.1e-139 500.4 339 72.6
Actinidia38703 Actinidia chinensis HOM05D001207 ORTHO05D009015 1.9e-139 499.6 340 74.7
CDE10G0689 Ceratophyllum demersum HOM05D001207 ORTHO05D009015 2.1e-138 496.1 339 73.2
AL7G44010 Arabidopsis lyrata HOM05D001207 ORTHO05D009015 1.5e-136 490.0 338 71.3
AT5G35170 Arabidopsis thaliana HOM05D001207 ORTHO05D009015 3.4e-136 488.8 338 71.0
BcaC07g37674 Brassica carinata HOM05D001207 ORTHO05D009015 3.4e-136 488.8 335 71.3
BcaB04g18058 Brassica carinata HOM05D001207 ORTHO05D009015 7.5e-136 487.6 335 70.7
A08p09620 Brassica napus HOM05D001207 ORTHO05D009015 7.5e-136 487.6 348 69.0
Thhalv10003444m.g Eutrema salsugineum HOM05D001207 ORTHO05D009015 9.8e-136 487.3 335 70.4
Carub.0007s3100 Capsella rubella HOM05D001207 ORTHO05D009015 1.7e-135 486.5 338 70.7
Cc06_g07370 Coffea canephora HOM05D001207 ORTHO05D009015 2.9e-135 485.7 322 74.5
unitig_62.g23479 Utricularia gibba HOM05D001207 ORTHO05D009015 3.7e-135 485.3 343 71.7
Sp7g07210 Schrenkiella parvula HOM05D001207 ORTHO05D009015 3.2e-134 482.3 335 69.9
HPP92_003923 Vanilla planifolia HOM05D001207 ORTHO05D002396 4.6e-133 478.4 282 81.2
SEGI_19852 Sequoiadendron giganteum HOM05D001207 ORTHO05D009015 3.0e-132 475.7 340 69.4
Os08g0288200 Oryza sativa ssp. japonica HOM05D001207 ORTHO05D009015 8.6e-132 474.2 340 68.5
CARHR217250 Cardamine hirsuta HOM05D001207 ORTHO05D009015 1.5e-131 473.4 292 76.0
Aa31sc222G100 Aethionema arabicum HOM05D001207 ORTHO05D009015 4.3e-131 471.9 332 69.9
BraA08t32959Z Brassica rapa HOM05D001207 ORTHO05D009015 5.6e-131 471.5 288 77.8
BolC8t48045H Brassica oleracea HOM05D001207 ORTHO05D009015 2.8e-130 469.2 336 69.3
Zm00001eb177670 Zea mays HOM05D001207 ORTHO05D009015 1.1e-126 457.2 330 68.2
AagrBONN_evm.TU.Sc2ySwM_344.1402 Anthoceros agrestis HOM05D001207 ORTHO05D009015 4.1e-118 428.7 342 61.7
AUR62011265 Chenopodium quinoa HOM05D001207 ORTHO05D009015 2.1e-117 426.4 337 66.5
AUR62041441 Chenopodium quinoa HOM05D001207 ORTHO05D009015 6.0e-117 424.9 337 66.8
Psat1g022840 Pisum sativum HOM05D001207 ORTHO05D009015 7.8e-117 424.5 284 75.0
Mapoly0139s0019 Marchantia polymorpha HOM05D001207 ORTHO05D009015 8.1e-114 414.5 341 60.4
AUR62043763 Chenopodium quinoa HOM05D001207 ORTHO05D009015 4.0e-113 412.1 248 82.7
SMO356G0649 Selaginella moellendorffii HOM05D001207 ORTHO05D009015 2.5e-107 392.9 331 58.6
Pp3c23_18090 Physcomitrium patens HOM05D001207 ORTHO05D009015 2.1e-101 373.2 302 58.6
Sc08g0004930 Simmondsia chinensis HOM05D001207 ORTHO05D009015 2.1e-98 363.2 230 78.7
Pp3c23_18091 Physcomitrium patens HOM05D001207 ORTHO05D009015 1.3e-84 317.4 302 52.6
Cpa.g.sc397.8 Carica papaya HOM05D001207 ORTHO05D009015 7.4e-67 258.5 151 83.4
HPP92_003781 Vanilla planifolia HOM05D001207 ORTHO05D009015 4.2e-62 242.7 186 68.8
MCO16G216 Micromonas commoda HOM05D001207 ORTHO05D009015 1.5e-56 224.2 274 45.3
PRCOL_00002653 Prasinoderma coloniale HOM05D001207 ORTHO05D009015 9.4e-54 214.9 268 42.5
CAN.G444.3 Capsicum annuum HOM05D001207 ORTHO05D009015 8.0e-53 211.8 136 77.2
DCAR_018904 Daucus carota HOM05D001207 ORTHO05D009015 5.7e-51 205.7 136 74.3
CAN.G61.14 Capsicum annuum HOM05D001673 ORTHO05D009015 3.6e-45 186.4 118 74.6
DCAR_021502 Daucus carota HOM05D001207 ORTHO05D009015 7.7e-40 168.7 113 75.2
CBR_g41085 Chara braunii HOM05D001207 ORTHO05D009015 1.3e-39 167.9 161 53.4
Hma1.2p1_0182F.1_g080600 Hydrangea macrophylla HOM05D001207 ORTHO05D009015 1.2e-24 118.2 94 62.8
Lsat_1_v5_gn_6_30540 Lactuca sativa HOM05D001207 ORTHO05D009015 1.7e-18 97.8 88 59.1
CBR_g41087 Chara braunii HOM05D001207 ORTHO05D009015 6.4e-18 95.9 107 44.9
Lsat_1_v5_gn_5_26021 Lactuca sativa HOM05D000032 ORTHO05D002561 3.3e-14 83.6 51 84.3
Cpa.g.c38910 Carica papaya HOM05D001207 ORTHO05D120877 5.6e-14 82.8 41 87.8


User provided reference genes

Program Settings