Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.1e-284 981.1 486 100.0
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.2e-238 829.7 455 92.5
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 8.3e-213 743.8 455 82.2
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 1.4e-212 743.0 455 82.0
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 4.6e-211 738.0 452 82.1
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 6.0e-211 737.6 451 82.3
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 6.0e-211 737.6 455 82.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.3e-210 736.5 455 81.5
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.3e-210 736.5 455 82.2
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 4.3e-209 731.5 455 81.3
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 1.6e-208 729.6 455 80.9
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 2.3e-207 725.7 455 80.9
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 2.3e-207 725.7 451 81.6
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 3.1e-207 725.3 455 81.1
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 6.8e-207 724.2 455 80.9
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 1.2e-206 723.4 455 80.9
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 2.6e-206 722.2 451 81.2
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 5.8e-206 721.1 455 79.8
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 9.8e-206 720.3 455 80.2
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.3e-205 719.9 455 80.2
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 1.7e-205 719.5 452 80.1
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 2.9e-205 718.8 455 79.3
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 3.7e-205 718.4 462 80.5
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 1.4e-204 716.5 455 81.1
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 2.4e-204 715.7 456 80.7
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 3.2e-204 715.3 449 81.3
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 4.1e-204 714.9 454 79.3
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 5.4e-204 714.5 455 79.3
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 9.2e-204 713.8 455 79.1
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 1.6e-203 713.0 451 79.8
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 2.1e-203 712.6 449 80.8
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 2.1e-203 712.6 452 79.2
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 3.5e-203 711.8 455 79.6
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 4.6e-203 711.4 449 80.6
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 4.6e-203 711.4 455 79.6
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 4.6e-203 711.4 455 79.1
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 4.6e-203 711.4 455 79.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 2.3e-202 709.1 455 78.9
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 3.9e-202 708.4 450 78.7
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 6.6e-202 707.6 455 78.7
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 1.9e-201 706.1 455 78.2
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 4.3e-201 704.9 451 78.7
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 7.3e-201 704.1 450 78.0
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 2.1e-200 702.6 454 77.8
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 4.7e-200 701.4 450 77.3
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 4.7e-200 701.4 455 77.8
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 6.2e-200 701.0 455 78.0
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 8.1e-200 700.7 450 78.0
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 1.1e-199 700.3 450 77.3
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.1e-199 700.3 455 76.9
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 1.1e-199 700.3 444 80.6
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 1.4e-199 699.9 450 77.8
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 1.8e-199 699.5 445 78.9
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 3.1e-199 698.7 455 77.1
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 3.1e-199 698.7 458 77.7
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 4.0e-199 698.4 456 78.7
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.0e-199 698.4 456 78.7
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.0e-199 698.4 456 78.7
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 5.2e-199 698.0 450 77.1
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 8.9e-199 697.2 455 76.9
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 8.9e-199 697.2 451 78.3
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 1.2e-198 696.8 450 77.1
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 1.2e-198 696.8 450 77.3
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 1.5e-198 696.4 451 78.0
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.6e-198 695.7 456 78.5
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 2.6e-198 695.7 457 78.1
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 3.4e-198 695.3 451 77.8
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 5.8e-198 694.5 449 78.4
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 7.6e-198 694.1 450 76.7
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 1.3e-197 693.3 452 78.1
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 2.2e-197 692.6 455 76.3
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 3.8e-197 691.8 455 75.4
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 3.8e-197 691.8 450 76.4
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 3.8e-197 691.8 450 76.4
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 4.9e-197 691.4 455 77.6
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 6.4e-197 691.0 456 78.3
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 6.4e-197 691.0 457 77.2
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 5.4e-196 688.0 452 76.3
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 5.4e-196 688.0 449 78.0
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 2.1e-195 686.0 455 75.8
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 7.8e-195 684.1 455 77.4
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.0e-194 683.7 452 77.2
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 1.9e-193 679.5 452 77.7
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 1.9e-193 679.5 455 76.5
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 2.5e-193 679.1 454 77.5
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 4.3e-193 678.3 455 74.7
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 7.3e-193 677.6 455 76.0
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 7.3e-193 677.6 455 75.4
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 7.3e-193 677.6 453 76.2
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 1.6e-192 676.4 455 75.8
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 2.1e-192 676.0 448 77.5
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 1.8e-191 672.9 455 75.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 2.0e-190 669.5 455 74.5
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 3.4e-190 668.7 455 73.6
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 4.9e-189 664.8 455 74.7
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 1.4e-188 663.3 453 77.0
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 1.2e-187 660.2 457 74.0
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 6.0e-187 657.9 448 75.2
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 1.7e-186 656.4 447 76.1
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 1.6e-184 649.8 456 73.7
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 3.1e-183 645.6 453 72.8
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 2.2e-181 639.4 460 72.2
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 3.8e-181 638.6 455 72.3
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 3.0e-178 629.0 447 73.6
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 7.4e-177 624.4 453 71.7
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 9.3e-172 607.4 456 68.4
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 3.7e-168 595.5 455 67.9
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 1.5e-166 590.1 468 66.9
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 6.7e-162 574.7 454 66.3
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 8.2e-160 567.8 461 65.3
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 4.1e-143 512.3 458 60.5
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 2.3e-138 496.5 356 73.6
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 3.2e-132 476.1 478 55.2
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 3.8e-125 452.6 385 64.4
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 3.8e-117 426.0 275 79.3
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.0e-110 403.7 464 49.8
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 7.3e-100 368.6 309 64.4
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 1.1e-98 364.8 512 45.5
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 2.6e-81 307.0 200 78.5
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.3e-69 268.1 449 36.5
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 1.4e-58 231.5 239 55.6
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-37 161.4 188 51.1
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 8.8e-37 159.1 151 60.9
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 7.0e-26 122.9 95 66.3


User provided reference genes

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