Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2319 Trochodendron aralioides HOM05D004126 ORTHO05D004818 1.4e-187 659.4 331 100.0
MBI14_g32122_MAGBIO Magnolia biondii HOM05D004126 ORTHO05D010914 1.5e-24 117.9 71 81.7
Nn2g13476 Nelumbo nucifera HOM05D004126 ORTHO05D004818 4.9e-23 112.8 72 76.4
ATR1136G081 Amborella trichopoda HOM05D004126 ORTHO05D004818 2.4e-22 110.5 71 74.6
Dinv29439 Davidia involucrata HOM05D004126 ORTHO05D004818 2.4e-22 110.5 94 66.0
Actinidia35453 Actinidia chinensis HOM05D004126 ORTHO05D004818 1.2e-21 108.2 77 71.4
arahy.Tifrunner.gnm1.ann1.M99YM4 Arachis hypogaea HOM05D004126 ORTHO05D004818 1.2e-21 108.2 72 73.6
GSVIVG01031376001 Vitis vinifera HOM05D004126 ORTHO05D004818 1.6e-21 107.8 69 79.7
PGR119G0779 Punica granatum HOM05D004126 ORTHO05D004818 2.7e-21 107.1 68 77.9
arahy.Tifrunner.gnm1.ann1.S740RW Arachis hypogaea HOM05D004126 ORTHO05D004818 3.5e-21 106.7 72 72.2
Nn2g11232 Nelumbo nucifera HOM05D004126 ORTHO05D004818 3.5e-21 106.7 68 79.4
TWI12G1250 Tripterygium wilfordii HOM05D004126 ORTHO05D004818 3.5e-21 106.7 69 75.4
Glyma.12G182500 Glycine max HOM05D004126 ORTHO05D004818 4.6e-21 106.3 68 77.9
Ciclev10029753m.g Citrus clementina HOM05D004126 ORTHO05D004818 6.0e-21 105.9 67 80.6
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 6.0e-21 105.9 82 69.5
MD03G1165300 Malus domestica HOM05D004126 ORTHO05D004818 7.8e-21 105.5 68 79.4
ClCG02G021980 Citrullus lanatus HOM05D004126 ORTHO05D004818 1.0e-20 105.1 78 70.5
arahy.Tifrunner.gnm1.ann1.A0MYZQ Arachis hypogaea HOM05D004126 ORTHO05D004818 1.3e-20 104.8 68 76.5
arahy.Tifrunner.gnm1.ann1.IBK94M Arachis hypogaea HOM05D004126 ORTHO05D004818 1.3e-20 104.8 68 76.5
MSTRG.12360 Avicennia marina HOM05D004126 ORTHO05D004818 1.7e-20 104.4 91 59.3
FAN16G2018 Fragaria x ananassa HOM05D004126 ORTHO05D004818 2.3e-20 104.0 68 75.0
FAN21G0712 Fragaria x ananassa HOM05D004126 ORTHO05D004818 2.3e-20 104.0 68 75.0
FAN25G0231 Fragaria x ananassa HOM05D004126 ORTHO05D004818 2.3e-20 104.0 68 75.0
MD11G1159300 Malus domestica HOM05D004126 ORTHO05D004818 2.3e-20 104.0 68 77.9
THA.LOC104800546 Tarenaya hassleriana HOM05D004126 ORTHO05D004818 2.3e-20 104.0 68 73.5
Hma1.2p1_0695F.1_g204510 Hydrangea macrophylla HOM05D004126 ORTHO05D004818 3.9e-20 103.2 67 74.6
CiPaw.14G102800 Carya illinoinensis HOM05D004126 ORTHO05D004818 5.1e-20 102.8 71 71.8
Manes.11G159200 Manihot esculenta HOM05D004126 ORTHO05D004818 5.1e-20 102.8 68 73.5
HPP92_018131 Vanilla planifolia HOM05D004126 ORTHO05D004818 5.1e-20 102.8 78 70.5
Glyma.11G187900 Glycine max HOM05D004126 ORTHO05D004818 6.6e-20 102.4 68 73.5
Sc10g0010310 Simmondsia chinensis HOM05D004126 ORTHO05D004818 6.6e-20 102.4 68 73.5
Actinidia07223 Actinidia chinensis HOM05D004126 ORTHO05D004818 8.6e-20 102.1 68 75.0
CAN.G644.16 Capsicum annuum HOM05D004126 ORTHO05D004818 8.6e-20 102.1 68 72.1
Glyma.12G086600 Glycine max HOM05D004126 ORTHO05D004818 8.6e-20 102.1 68 73.5
Nitab4.5_0004070g0040 Nicotiana tabacum HOM05D004126 ORTHO05D004818 8.6e-20 102.1 68 72.1
Oeu050197.1 Olea europaea HOM05D004126 ORTHO05D004818 8.6e-20 102.1 68 75.0
Cc01_g09610 Coffea canephora HOM05D004126 ORTHO05D004818 1.1e-19 101.7 68 73.5
DCAR_012178 Daucus carota HOM05D004126 ORTHO05D004818 1.1e-19 101.7 67 74.6
SalBow3G0427 Salvia bowleyana HOM05D004126 ORTHO05D004818 1.1e-19 101.7 79 65.8
Sopen11g026730 Solanum pennellii HOM05D004126 ORTHO05D004818 1.1e-19 101.7 68 70.6
Nitab4.5_0009196g0030 Nicotiana tabacum HOM05D004126 ORTHO05D004818 1.5e-19 101.3 82 65.9
Oeu035542.1 Olea europaea HOM05D004126 ORTHO05D004818 1.5e-19 101.3 68 75.0
THA.LOC109117263 Tarenaya hassleriana HOM05D004126 ORTHO05D004818 1.5e-19 101.3 68 73.5
Peaxi162Scf00114g00210 Petunia axillaris HOM05D004126 ORTHO05D004818 1.9e-19 100.9 66 75.8
Prupe.6G122400 Prunus persica HOM05D004126 ORTHO05D004818 1.9e-19 100.9 66 75.8
PGSC0003DMG400026528 Solanum tuberosum HOM05D004126 ORTHO05D004818 1.9e-19 100.9 68 70.6
Eucgr.J00455 Eucalyptus grandis HOM05D004126 ORTHO05D004818 2.5e-19 100.5 70 72.9
Manes.04G007100 Manihot esculenta HOM05D004126 ORTHO05D004818 2.5e-19 100.5 68 72.1
Sabra16G0311900 Salix brachista HOM05D004126 ORTHO05D004818 2.5e-19 100.5 67 76.1
vmacro14365 Vaccinium macrocarpon HOM05D004126 ORTHO05D004818 2.5e-19 100.5 67 73.1
CSS0047176 Camellia sinensis var. sinensis HOM05D004126 ORTHO05D004818 3.3e-19 100.1 94 59.6
Lj3g0005404 Lotus japonicus HOM05D004126 ORTHO05D004818 3.3e-19 100.1 68 75.0
Sed0008155 Sechium edule HOM05D004126 ORTHO05D004818 3.3e-19 100.1 68 73.5
MELO3C021443.2 Cucumis melo HOM05D004126 ORTHO05D004818 4.3e-19 99.8 66 77.3
Peaxi162Scf01284g00022 Petunia axillaris HOM05D004126 ORTHO05D004818 4.3e-19 99.8 68 70.6
Phvul.005G126200 Phaseolus vulgaris HOM05D004126 ORTHO05D004818 4.3e-19 99.8 68 72.1
Sed0026235 Sechium edule HOM05D004126 ORTHO05D004818 4.3e-19 99.8 68 72.1
Zm00001eb110520 Zea mays HOM05D004126 ORTHO05D004818 4.3e-19 99.8 78 64.1
Glyma.13G318450 Glycine max HOM05D004126 ORTHO05D004818 5.6e-19 99.4 68 72.1
Gohir.D08G014400 Gossypium hirsutum HOM05D004126 ORTHO05D004818 5.6e-19 99.4 68 73.5
Gorai.004G008800 Gossypium raimondii HOM05D004126 ORTHO05D004818 5.6e-19 99.4 68 73.5
Potri.001G460200 Populus trichocarpa HOM05D004126 ORTHO05D004818 5.6e-19 99.4 67 74.6
CARHR227690 Cardamine hirsuta HOM05D004126 ORTHO05D004818 7.3e-19 99.0 68 73.5
Nitab4.5_0003082g0050 Nicotiana tabacum HOM05D004126 ORTHO05D004818 7.3e-19 99.0 66 75.8
RcHm_v2.0_Chr5g0055141 Rosa chinensis HOM05D004126 ORTHO05D004818 7.3e-19 99.0 68 70.6
Thecc.09G289400 Theobroma cacao HOM05D004126 ORTHO05D004818 7.3e-19 99.0 68 73.5
Lalb_Chr24g0395191 Lupinus albus HOM05D004126 ORTHO05D004818 9.6e-19 98.6 68 73.5
EL10Ac9g23026 Beta vulgaris HOM05D004126 ORTHO05D004818 1.2e-18 98.2 81 61.7
BcaC09g51261 Brassica carinata HOM05D004126 ORTHO05D004818 1.2e-18 98.2 68 72.1
C01p15030 Brassica napus HOM05D004126 ORTHO05D004818 1.2e-18 98.2 68 72.1
BolC1t01452H Brassica oleracea HOM05D004126 ORTHO05D004818 1.2e-18 98.2 68 72.1
AUR62029880 Chenopodium quinoa HOM05D004126 ORTHO05D004818 1.2e-18 98.2 83 62.7
ClCG02G021990 Citrullus lanatus HOM05D004126 ORTHO05D004818 1.2e-18 98.2 73 71.2
Gohir.D08G014300 Gossypium hirsutum HOM05D004126 ORTHO05D004818 1.2e-18 98.2 68 72.1
Gorai.004G008700 Gossypium raimondii HOM05D004126 ORTHO05D004818 1.2e-18 98.2 68 72.1
Lj3g0019761 Lotus japonicus HOM05D004126 ORTHO05D004818 1.2e-18 98.2 68 72.1
Os07g0647500 Oryza sativa ssp. japonica HOM05D004126 ORTHO05D004818 1.2e-18 98.2 68 72.1
QL01p013387 Quercus lobata HOM05D004126 ORTHO05D004818 1.2e-18 98.2 70 68.6
Sp7g19190 Schrenkiella parvula HOM05D004126 ORTHO05D004818 1.2e-18 98.2 71 69.0
Phvul.011G091700 Phaseolus vulgaris HOM05D004126 ORTHO05D004818 1.6e-18 97.8 68 69.1
Potri.011G156400 Populus trichocarpa HOM05D004126 ORTHO05D004818 1.6e-18 97.8 67 74.6
Hund13926 Selenicereus undatus HOM05D004126 ORTHO05D004818 1.6e-18 97.8 73 67.1
BraA01t01191Z Brassica rapa HOM05D004126 ORTHO05D004818 2.1e-18 97.4 68 70.6
CSS0041849 Camellia sinensis var. sinensis HOM05D004126 ORTHO05D004818 2.1e-18 97.4 66 74.2
CANSAT54G1468 Cannabis sativa HOM05D004126 ORTHO05D004818 2.1e-18 97.4 71 67.6
CsaV3_6G014810 Cucumis sativus L. HOM05D004126 ORTHO05D004818 2.1e-18 97.4 71 70.4
AUR62003964 Chenopodium quinoa HOM05D004126 ORTHO05D004818 2.8e-18 97.1 66 72.7
Rhsim10G0039800 Rhododendron simsii HOM05D004126 ORTHO05D004818 2.8e-18 97.1 66 74.2
Migut.D02341 Erythranthe guttata HOM05D004126 ORTHO05D004818 4.7e-18 96.3 68 69.1
Os02g0162000 Oryza sativa ssp. japonica HOM05D004126 ORTHO05D004818 4.7e-18 96.3 68 67.6
AT4G21105 Arabidopsis thaliana HOM05D004126 ORTHO05D004818 6.2e-18 95.9 68 72.1
AUR62025834 Chenopodium quinoa HOM05D004126 ORTHO05D004818 6.2e-18 95.9 66 69.7
Medtr4g101930 Medicago truncatula HOM05D004126 ORTHO05D004818 6.2e-18 95.9 71 66.2
Nn2g13477 Nelumbo nucifera HOM05D004126 ORTHO05D004818 6.2e-18 95.9 62 75.8
AL7G33020 Arabidopsis lyrata HOM05D004126 ORTHO05D004818 8.1e-18 95.5 68 72.1
Ca_01671_v3 Cicer arietinum L. HOM05D004126 ORTHO05D004818 8.1e-18 95.5 68 69.1
Duzib170G0121 Durio zibethinus HOM05D004126 ORTHO05D004818 8.1e-18 95.5 68 72.1
CAN.G919.11 Capsicum annuum HOM05D004126 ORTHO05D004818 1.1e-17 95.1 66 69.7
Migut.N02508 Erythranthe guttata HOM05D004126 ORTHO05D004818 1.1e-17 95.1 68 70.6
BcaNung06968 Brassica carinata HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
A08p15270 Brassica napus HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
C03p83510 Brassica napus HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
C07p51070 Brassica napus HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
BolC7t45607H Brassica oleracea HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
BraA03t14337Z Brassica rapa HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
BraA08t33505Z Brassica rapa HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
Carub.0007s2032 Capsella rubella HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 69.1
Psat4g069800 Pisum sativum HOM05D004126 ORTHO05D004818 1.4e-17 94.7 71 66.2
TPR.G28100 Trifolium pratense HOM05D004126 ORTHO05D004818 1.4e-17 94.7 71 66.2
Zm00001eb329410 Zea mays HOM05D004126 ORTHO05D004818 1.4e-17 94.7 68 67.6
BcaC01g00712 Brassica carinata HOM05D004126 ORTHO05D004818 1.8e-17 94.4 68 69.1
A01p12450 Brassica napus HOM05D004126 ORTHO05D004818 1.8e-17 94.4 68 69.1
BolC3t20632H Brassica oleracea HOM05D004126 ORTHO05D004818 1.8e-17 94.4 68 69.1
Medtr2g085045 Medicago truncatula HOM05D004126 ORTHO05D004818 1.8e-17 94.4 66 72.7
PGSC0003DMG400007147 Solanum tuberosum HOM05D004126 ORTHO05D004818 1.8e-17 94.4 66 69.7
Gohir.A05G083000 Gossypium hirsutum HOM05D004126 ORTHO05D004818 2.4e-17 94.0 68 70.6
Gohir.D05G086000 Gossypium hirsutum HOM05D004126 ORTHO05D004818 2.4e-17 94.0 68 70.6
Gorai.009G087600 Gossypium raimondii HOM05D004126 ORTHO05D004818 2.4e-17 94.0 68 70.6
unitig_22.g6645 Utricularia gibba HOM05D004126 ORTHO05D004818 2.4e-17 94.0 71 64.8
Atru.chr3.3354 Acer truncatum HOM05D004126 ORTHO05D004818 3.1e-17 93.6 66 71.2
Sopen06g030950 Solanum pennellii HOM05D004126 ORTHO05D004818 3.1e-17 93.6 66 69.7
TPR.G37632 Trifolium pratense HOM05D004126 ORTHO05D004818 3.1e-17 93.6 71 64.8
Ah.07g202810 Amaranthus hybridus HOM05D004126 ORTHO05D004818 4.0e-17 93.2 83 57.8
BcaC01g00715 Brassica carinata HOM05D004126 ORTHO05D004818 4.0e-17 93.2 68 66.2
ECA248G1359 Erigeron canadensis HOM05D004126 ORTHO05D004818 4.0e-17 93.2 68 69.1
Gohir.A08G004000 Gossypium hirsutum HOM05D004126 ORTHO05D004818 5.2e-17 92.8 68 70.6
Lsat_1_v5_gn_1_62101 Lactuca sativa HOM05D004126 ORTHO05D004818 5.2e-17 92.8 89 57.3
Eucgr.B03883 Eucalyptus grandis HOM05D004126 ORTHO05D004818 8.9e-17 92.0 65 69.2
HanXRQChr01g0019701 Helianthus annuus HOM05D004126 ORTHO05D004818 8.9e-17 92.0 83 62.7
HanXRQChr04g0094651 Helianthus annuus HOM05D004126 ORTHO05D004818 8.9e-17 92.0 74 64.9
PSO384G3267 Papaver somniferum HOM05D004126 ORTHO05D004818 8.9e-17 92.0 66 66.7
PGR102G0539 Punica granatum HOM05D004126 ORTHO05D004818 8.9e-17 92.0 66 68.2
arahy.Tifrunner.gnm1.ann1.A24RK9 Arachis hypogaea HOM05D004126 ORTHO05D004818 1.2e-16 91.7 66 65.2
A03p52630 Brassica napus HOM05D004126 ORTHO05D004818 1.2e-16 91.7 68 67.6
Lalb_Chr03g0027971 Lupinus albus HOM05D004126 ORTHO05D004818 1.2e-16 91.7 67 64.2
Medtr4g053330 Medicago truncatula HOM05D004126 ORTHO05D004818 1.2e-16 91.7 71 63.4
Psat5g255840 Pisum sativum HOM05D004126 ORTHO05D004818 1.2e-16 91.7 66 69.7
Gohir.A08G004100 Gossypium hirsutum HOM05D004126 ORTHO05D004818 1.5e-16 91.3 68 69.1
Sopen03g017380 Solanum pennellii HOM05D004126 ORTHO05D004818 1.5e-16 91.3 76 59.2
unitig_8.g3289 Utricularia gibba HOM05D004126 ORTHO05D004818 1.5e-16 91.3 68 66.2
ECA238G2243 Erigeron canadensis HOM05D004126 ORTHO05D004818 2.0e-16 90.9 66 71.2
Lalb_Chr19g0136701 Lupinus albus HOM05D004126 ORTHO05D004818 2.0e-16 90.9 67 65.7
TPR.G23418 Trifolium pratense HOM05D004126 ORTHO05D004818 2.6e-16 90.5 66 69.7
Lsat_1_v5_gn_2_95660 Lactuca sativa HOM05D004126 ORTHO05D004818 4.4e-16 89.7 77 61.0
CDE02G2464 Ceratophyllum demersum HOM05D004126 ORTHO05D004818 9.9e-16 88.6 70 67.1
Gohir.A03G116500 Gossypium hirsutum HOM05D004126 ORTHO05D004818 9.9e-16 88.6 68 67.6
CDE04G1551 Ceratophyllum demersum HOM05D004126 ORTHO05D004818 1.3e-15 88.2 70 68.6
ECA233G1451 Erigeron canadensis HOM05D004126 ORTHO05D004818 2.2e-15 87.4 64 67.2
SEGI_11030 Sequoiadendron giganteum HOM05D004126 ORTHO05D004818 2.2e-15 87.4 76 59.2
Zm00001eb351210 Zea mays HOM05D004126 ORTHO05D004818 4.9e-15 86.3 66 63.6
Lsat_1_v5_gn_6_39460 Lactuca sativa HOM05D004126 ORTHO05D004818 1.1e-14 85.1 66 66.7
MD03G1137200 Malus domestica HOM05D004126 ORTHO05D004818 2.4e-14 84.0 49 81.6
AagrBONN_evm.TU.Sc2ySwM_228.2832 Anthoceros agrestis HOM05D004126 ORTHO05D004818 9.3e-14 82.0 62 61.3
SGA_v2.0_scaffold83G26418 Striga asiatica HOM05D004126 ORTHO05D004818 6.0e-13 79.3 63 61.9
Duzib150G0214 Durio zibethinus HOM05D004126 ORTHO05D004818 2.3e-12 77.4 54 68.5
HanXRQChr14g0451651 Helianthus annuus HOM05D004126 ORTHO05D004818 3.0e-12 77.0 50 76.0
Thhalv10026571m.g Eutrema salsugineum HOM05D004126 ORTHO05D004818 6.6e-12 75.9 53 69.8
Haze_23434 Corylus avellana HOM05D004126 ORTHO05D004818 1.1e-11 75.1 56 64.3
Aqoxy4G01986 Aquilegia oxysepala HOM05D004126 ORTHO05D004818 1.5e-11 74.7 52 65.4
Nitab4.5_0006735g0040 Nicotiana tabacum HOM05D004126 ORTHO05D004818 1.5e-11 74.7 53 66.0
MELO3C021444.2 Cucumis melo HOM05D004126 ORTHO05D004818 2.5e-11 73.9 56 64.3
Aa31LG6G3140 Aethionema arabicum HOM05D003300 ORTHO05D003731 9.6e-11 72.0 47 72.3
Aqoxy3G03824 Aquilegia oxysepala HOM05D004126 ORTHO05D004818 1.8e-09 67.8 53 66.0
Os05g0457000 Oryza sativa ssp. japonica HOM05D004126 ORTHO05D004818 2.4e-09 67.4 61 55.7
DCAR_010375 Daucus carota HOM05D004126 ORTHO05D004818 9.0e-09 65.5 50 68.0
Mapoly0085s0067 Marchantia polymorpha HOM05D004126 ORTHO05D004818 1.5e-08 64.7 56 53.6
C08p30760 Brassica napus HOM05D004126 ORTHO05D004818 2.0e-08 64.3 53 60.4
PSO384G1920 Papaver somniferum HOM05D004126 ORTHO05D004818 2.9e-07 60.5 45 62.2


User provided reference genes

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