Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 8.8e-160 567.0 308 100.0
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 6.6e-107 391.3 299 70.9
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.1e-106 390.6 300 73.3
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.9e-106 389.8 301 70.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.6e-105 386.7 299 70.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 6.2e-105 384.8 307 70.4
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.8e-104 383.3 288 73.3
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 3.1e-104 382.5 300 71.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 4.0e-104 382.1 301 71.4
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 9.0e-104 380.9 301 70.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-103 380.6 301 70.8
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 2.6e-103 379.4 304 66.1
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 3.4e-103 379.0 301 71.4
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 9.9e-103 377.5 302 69.9
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 9.9e-103 377.5 304 66.4
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.7e-102 376.7 300 70.0
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.9e-102 375.9 302 68.9
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 3.8e-102 375.6 301 69.1
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.8e-102 375.6 301 69.8
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.8e-102 375.6 301 69.1
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 8.4e-102 374.4 301 68.4
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.4e-101 373.6 301 70.1
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 5.4e-101 371.7 283 72.8
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.2e-100 370.5 300 68.7
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.1e-100 369.8 301 69.1
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.0e-99 367.5 300 68.0
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.8e-99 366.7 301 69.1
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.3e-99 366.3 300 68.0
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-98 364.0 301 68.8
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.5e-98 363.6 306 64.7
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 9.6e-98 360.9 301 66.1
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.6e-97 360.1 308 65.3
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.1e-97 359.8 293 67.6
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 6.2e-97 358.2 308 67.9
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 8.1e-97 357.8 301 67.4
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.1e-96 357.5 299 66.6
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.8e-96 356.7 308 64.9
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.8e-96 356.7 308 66.6
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.1e-96 355.9 301 66.1
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 2.6e-95 352.8 308 63.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 7.6e-95 351.3 300 66.7
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 7.6e-95 351.3 300 67.3
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 9.9e-95 350.9 305 68.5
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.7e-94 350.1 302 65.9
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.9e-94 349.4 314 62.1
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.4e-93 347.1 307 65.1
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.2e-93 345.9 306 66.7
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 4.2e-93 345.5 301 66.1
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 9.3e-93 344.4 302 65.2
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.2e-92 344.0 300 64.0
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.6e-92 343.6 303 64.0
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.7e-92 342.8 296 65.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 4.6e-92 342.0 301 65.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.9e-92 341.3 299 63.9
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.0e-91 340.9 302 66.6
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.0e-91 340.9 296 66.2
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 3.9e-91 339.0 300 63.3
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 5.1e-91 338.6 301 65.8
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 3.3e-90 335.9 298 64.8
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.3e-89 334.0 305 62.0
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.6e-89 333.6 297 63.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 2.8e-89 332.8 299 65.6
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 2.8e-89 332.8 305 64.6
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 4.8e-89 332.0 303 62.0
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.4e-88 329.7 298 63.8
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 5.3e-88 328.6 304 61.8
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 5.3e-88 328.6 298 65.1
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.0e-87 326.6 301 63.1
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.3e-86 323.9 305 60.7
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 8.4e-86 321.2 305 60.7
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.4e-85 320.5 303 64.0
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 9.3e-85 317.8 372 53.8
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.1e-84 316.6 296 61.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 2.7e-84 316.2 296 61.5
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 7.9e-84 314.7 305 60.7
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 7.9e-84 314.7 246 71.5
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.0e-83 314.3 299 60.5
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.8e-83 313.5 305 60.7
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.8e-83 313.5 299 60.9
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 6.7e-83 311.6 305 59.0
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.5e-82 310.5 305 58.7
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 4.8e-81 305.4 305 58.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.1e-80 304.3 303 61.7
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.2e-79 300.8 299 59.5
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.7e-78 297.0 301 59.8
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 6.1e-76 288.5 298 56.4
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 3.3e-74 282.7 298 52.7
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 4.3e-74 282.3 291 59.8
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 7.4e-74 281.6 305 57.0
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 7.4e-74 281.6 305 57.0
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.6e-68 263.8 261 58.6
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.4e-67 260.8 307 53.1
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.4e-67 260.8 307 53.1
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.5e-66 257.3 307 52.8
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.5e-66 257.3 307 52.8
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.5e-66 257.3 307 52.8
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 4.8e-65 252.3 289 52.2
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.8e-56 223.8 269 52.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 5.9e-55 218.8 169 72.2
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 3.2e-53 213.0 238 55.0
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 6.1e-52 208.8 215 56.7
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 6.3e-49 198.7 193 60.6
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 5.9e-47 192.2 230 49.1
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 4.4e-42 176.0 322 37.9
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.3e-38 163.7 215 47.4
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.5e-37 161.0 168 50.0
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.2e-36 157.9 157 63.7
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 5.4e-32 142.5 223 45.7
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 9.2e-32 141.7 167 45.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 7.0e-24 115.5 145 46.2
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 8.6e-14 82.0 56 80.4
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.1e-11 75.1 169 30.8
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.7e-09 67.8 41 80.5
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 4.9e-09 66.2 64 53.1
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 8.3e-09 65.5 37 86.5


User provided reference genes

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