Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 9.0e-51 203.4 108 100.0
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.7e-41 172.6 108 83.3
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 2.5e-40 168.7 103 86.4
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 4.6e-39 164.5 106 81.1
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.8e-38 162.5 103 82.5
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 3.9e-38 161.4 104 81.7
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.5e-37 159.5 103 82.5
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.9e-37 159.1 101 84.2
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.5e-37 158.7 101 83.2
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 3.3e-37 158.3 102 80.4
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 4.3e-37 157.9 102 79.4
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 4.3e-37 157.9 103 81.6
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 9.7e-37 156.8 103 78.6
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 9.7e-37 156.8 103 81.6
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 2.2e-36 155.6 103 79.6
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.8e-36 155.2 103 80.6
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.8e-36 155.2 100 81.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 6.3e-36 154.1 103 78.6
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 6.3e-36 154.1 102 76.5
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.4e-35 152.9 99 77.8
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.8e-35 152.5 101 80.2
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 4.1e-35 151.4 107 74.8
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 4.1e-35 151.4 102 74.5
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 5.3e-35 151.0 106 72.6
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 5.3e-35 151.0 99 76.8
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 6.9e-35 150.6 105 73.3
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 6.9e-35 150.6 101 75.2
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 6.9e-35 150.6 101 77.2
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 6.9e-35 150.6 101 76.2
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 9.0e-35 150.2 101 78.2
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.2e-34 149.8 101 74.3
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 1.2e-34 149.8 123 68.3
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.5e-34 149.4 101 77.2
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-34 149.4 101 77.2
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.5e-34 149.4 103 76.7
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 2.0e-34 149.1 100 76.0
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 2.0e-34 149.1 96 80.2
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.0e-34 149.1 101 77.2
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.0e-34 149.1 99 77.8
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 4.5e-34 147.9 104 73.1
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.5e-34 147.9 101 76.2
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 4.5e-34 147.9 100 79.0
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 5.9e-34 147.5 106 72.6
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 5.9e-34 147.5 100 77.0
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 5.9e-34 147.5 97 79.4
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 5.9e-34 147.5 96 81.2
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 2.2e-33 145.6 101 75.2
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 2.9e-33 145.2 95 78.9
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 2.9e-33 145.2 101 77.2
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 2.9e-33 145.2 102 72.5
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 3.8e-33 144.8 101 74.3
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.8e-33 144.8 101 78.2
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 5.0e-33 144.4 96 77.1
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 8.5e-33 143.7 101 72.3
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 8.5e-33 143.7 100 74.0
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 1.1e-32 143.3 102 72.5
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.1e-32 143.3 100 71.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.4e-32 142.9 102 70.6
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.4e-32 142.9 100 74.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 4.2e-32 141.4 101 71.3
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 4.2e-32 141.4 101 71.3
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 4.2e-32 141.4 101 71.3
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 4.2e-32 141.4 101 71.3
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 5.5e-32 141.0 104 70.2
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 5.5e-32 141.0 104 70.2
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 5.5e-32 141.0 101 71.3
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 7.2e-32 140.6 105 71.4
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 7.2e-32 140.6 102 69.6
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 7.2e-32 140.6 98 72.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 9.3e-32 140.2 100 72.0
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 9.3e-32 140.2 101 71.3
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 9.3e-32 140.2 96 76.0
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 72.5
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 69.6
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.2e-31 139.8 103 69.9
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.2e-31 139.8 107 70.1
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.6e-31 139.4 96 74.0
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 2.1e-31 139.0 101 70.3
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 2.1e-31 139.0 101 70.3
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.1e-31 139.0 106 69.8
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 2.7e-31 138.7 101 68.3
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 3.6e-31 138.3 102 70.6
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 7.9e-31 137.1 102 70.6
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.4e-30 136.3 100 70.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.8e-30 136.0 102 68.6
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 3.0e-30 135.2 101 69.3
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 6.7e-30 134.0 102 67.6
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 3.3e-29 131.7 105 69.5
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 3.3e-29 131.7 98 69.4
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 4.3e-29 131.3 160 51.9
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 5.7e-29 131.0 102 65.7
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 5.7e-29 131.0 102 65.7
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 7.4e-29 130.6 102 65.7
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 2.2e-28 129.0 102 69.6
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 2.8e-28 128.6 105 67.6
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 3.7e-28 128.3 100 69.0
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 6.3e-28 127.5 102 68.6
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 6.9e-27 124.0 104 58.7
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 9.1e-27 123.6 104 59.6
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 4.5e-26 121.3 78 82.1
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.3e-25 119.8 77 83.1
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 8.5e-25 117.1 79 77.2
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.9e-24 115.9 102 57.8
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 4.2e-24 114.8 78 75.6
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 5.5e-24 114.4 84 70.2
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 9.4e-24 113.6 85 68.2
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 4.7e-23 111.3 83 71.1
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.0e-22 110.2 76 76.3
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.0e-22 110.2 77 72.7
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.0e-22 110.2 102 57.8
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 1.4e-22 109.8 76 75.0
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.3e-22 109.0 104 59.6
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 4.4e-21 104.8 102 54.9
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.3e-20 103.2 76 73.7
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.7e-20 102.8 176 39.2
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.8e-19 99.4 76 68.4
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 2.4e-19 99.0 76 68.4
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 3.4e-18 95.1 74 64.9
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 5.9e-18 94.4 100 50.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 2.2e-17 92.4 105 50.5
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 4.2e-16 88.2 103 51.5
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 1.3e-12 76.6 52 67.3
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 1.3e-12 76.6 52 67.3
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 2.2e-12 75.9 54 74.1
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 8.5e-09 63.9 98 36.7
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 5.5e-08 61.2 50 58.0
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 6.1e-07 57.8 89 37.1
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 2.3e-06 55.8 69 46.4
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 5.2e-06 54.7 79 38.0


User provided reference genes

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