Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.4e-69 266.2 138 100.0
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.2e-68 263.1 138 99.3
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.2e-42 176.8 138 68.8
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.5e-42 176.4 142 71.8
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 2.6e-42 175.6 139 69.1
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 2.6e-42 175.6 142 70.4
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 4.4e-42 174.9 142 69.7
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 1.1e-40 170.2 138 69.6
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 1.8e-40 169.5 138 67.4
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.4e-40 169.1 138 67.4
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 5.4e-40 167.9 147 66.7
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 7.0e-40 167.5 142 66.2
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 7.0e-40 167.5 138 64.5
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 7.0e-40 167.5 138 67.4
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 9.1e-40 167.2 143 65.7
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 9.1e-40 167.2 145 67.6
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 9.1e-40 167.2 138 65.9
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.7e-39 165.6 139 64.7
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 4.5e-39 164.9 138 65.9
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.5e-39 164.9 138 65.9
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 5.9e-39 164.5 109 77.1
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 5.9e-39 164.5 138 65.9
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 1.3e-38 163.3 142 65.5
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.3e-38 163.3 139 64.0
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 1.7e-38 162.9 141 65.2
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 1.7e-38 162.9 140 66.4
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 1.7e-38 162.9 138 65.9
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.9e-38 162.2 138 65.9
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 2.9e-38 162.2 137 65.0
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.0e-38 161.4 138 65.2
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 5.0e-38 161.4 138 68.1
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 5.0e-38 161.4 146 63.7
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 6.5e-38 161.0 104 76.0
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.5e-38 161.0 139 64.0
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.5e-38 161.0 140 67.1
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 6.5e-38 161.0 138 65.9
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 6.5e-38 161.0 138 62.3
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 8.5e-38 160.6 117 73.5
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 8.5e-38 160.6 139 66.9
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.1e-37 160.2 126 65.9
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.1e-37 160.2 138 66.7
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.5e-37 159.8 137 64.2
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.5e-37 159.8 138 64.5
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 2.5e-37 159.1 138 65.9
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 2.5e-37 159.1 144 63.9
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 3.2e-37 158.7 139 66.9
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 3.2e-37 158.7 91 86.8
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 4.2e-37 158.3 111 75.7
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 5.5e-37 157.9 138 63.8
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 5.5e-37 157.9 104 77.9
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 5.5e-37 157.9 139 66.9
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 9.4e-37 157.1 140 62.1
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.2e-36 156.8 144 61.8
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.6e-36 156.4 143 65.7
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 2.1e-36 156.0 142 62.0
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 2.7e-36 155.6 138 63.8
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 3.6e-36 155.2 141 65.2
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 3.6e-36 155.2 91 84.6
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.7e-36 154.8 121 69.4
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 6.1e-36 154.5 141 61.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 6.1e-36 154.5 138 63.0
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 6.1e-36 154.5 91 82.4
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 8.0e-36 154.1 138 64.5
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.0e-35 153.7 159 57.9
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.4e-35 153.3 99 76.8
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.8e-35 152.9 138 62.3
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.8e-35 152.9 91 81.3
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 6.8e-35 151.0 119 68.9
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 8.8e-35 150.6 138 63.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 1.5e-34 149.8 84 86.9
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 2.0e-34 149.4 143 60.8
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 2.0e-34 149.4 140 61.4
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 2.6e-34 149.1 136 57.4
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 3.4e-34 148.7 144 56.9
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 3.4e-34 148.7 138 59.4
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 4.4e-34 148.3 91 80.2
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 4.4e-34 148.3 91 80.2
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 4.4e-34 148.3 91 80.2
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 4.4e-34 148.3 91 80.2
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 4.4e-34 148.3 86 84.9
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 4.4e-34 148.3 92 78.3
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 7.5e-34 147.5 116 68.1
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.3e-33 146.7 82 86.6
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.7e-33 146.4 139 61.2
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.7e-33 146.4 84 81.0
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 2.2e-33 146.0 130 63.8
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 2.8e-33 145.6 138 60.9
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 3.7e-33 145.2 85 83.5
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 4.9e-33 144.8 136 58.8
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 4.9e-33 144.8 85 83.5
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 8.3e-33 144.1 82 84.1
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 1.4e-32 143.3 83 84.3
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.8e-32 142.9 137 56.9
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 3.1e-32 142.1 138 52.9
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 4.1e-32 141.7 137 59.9
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 7.0e-32 141.0 83 83.1
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 7.7e-31 137.5 114 61.4
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.7e-30 136.3 132 59.8
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 3.8e-30 135.2 88 76.1
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.9e-29 132.9 88 70.5
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.2e-28 130.2 85 76.5
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 4.4e-26 121.7 96 64.6
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.0e-22 110.5 132 54.5
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 8.3e-17 90.9 46 89.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 7.0e-16 87.8 84 57.1
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 3.2e-08 62.4 92 41.3
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 3.5e-07 58.9 39 74.4


User provided reference genes

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