Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.8e-71 271.9 145 100.0
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 5.8e-53 211.1 145 80.0
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 1.7e-44 183.0 144 66.0
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 5.4e-43 177.9 144 63.9
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.0e-41 173.7 142 66.9
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 3.1e-38 162.2 144 57.6
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 3.1e-38 162.2 142 59.2
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.0e-38 161.8 143 61.5
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.0e-38 161.8 143 61.5
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.0e-38 161.8 143 61.5
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 6.9e-38 161.0 144 56.9
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 9.0e-38 160.6 143 60.8
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 9.0e-38 160.6 145 60.0
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 9.0e-38 160.6 146 61.6
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.2e-37 160.2 155 59.4
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 5.8e-37 157.9 144 57.6
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 2.9e-36 155.6 136 58.1
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 3.8e-36 155.2 155 56.8
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 6.4e-36 154.5 102 77.5
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 6.4e-36 154.5 139 54.7
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 8.4e-36 154.1 146 56.2
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 1.9e-35 152.9 146 58.9
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 2.4e-35 152.5 144 56.2
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 4.2e-35 151.8 139 54.0
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 4.2e-35 151.8 143 57.3
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.1e-35 151.0 128 64.8
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 7.1e-35 151.0 144 58.3
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 7.1e-35 151.0 133 55.6
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 9.3e-35 150.6 143 59.4
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 1.2e-34 150.2 154 51.3
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 1.2e-34 150.2 144 54.9
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.6e-34 149.8 144 58.3
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.1e-34 149.4 144 56.2
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.1e-34 149.4 144 56.2
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 4.6e-34 148.3 144 57.6
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 6.0e-34 147.9 152 55.3
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 7.9e-34 147.5 148 55.4
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 1.8e-33 146.4 141 53.9
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.8e-33 146.4 133 54.1
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 2.3e-33 146.0 144 55.6
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 3.9e-33 145.2 144 53.5
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 8.7e-33 144.1 145 52.4
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 1.1e-32 143.7 145 57.2
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.5e-32 143.3 150 52.7
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 4.3e-32 141.7 144 52.8
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 2.1e-31 139.4 143 50.3
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 3.7e-31 138.7 143 52.4
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 8.1e-31 137.5 133 54.1
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 9.0e-30 134.0 144 49.3
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.5e-29 131.7 150 56.0
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 9.9e-29 130.6 145 52.4
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 2.2e-28 129.4 145 49.0
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.9e-28 129.0 138 54.3
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 1.4e-27 126.7 144 50.0
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.4e-27 126.7 148 51.4
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.2e-27 125.2 137 56.2
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 4.2e-27 125.2 144 48.6
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 5.5e-27 124.8 145 47.6
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 1.6e-26 123.2 145 46.9
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 1.6e-26 123.2 142 48.6
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 1.6e-26 123.2 144 45.8
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.6e-26 123.2 104 54.8
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.1e-26 122.9 155 47.7
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.1e-26 122.9 155 47.7
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 2.7e-26 122.5 144 46.5
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.3e-25 120.2 145 44.1
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 1.3e-25 120.2 123 51.2
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 5.1e-25 118.2 144 46.5
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 6.7e-25 117.9 142 47.9
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 8.7e-25 117.5 144 45.1
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 8.7e-25 117.5 142 47.9
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 1.9e-24 116.3 137 52.6
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.5e-24 115.9 145 45.5
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 4.3e-24 115.2 146 47.3
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 5.6e-24 114.8 146 47.3
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 5.6e-24 114.8 157 45.9
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 7.4e-24 114.4 136 47.8
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.3e-23 113.6 145 44.1
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 4.8e-23 111.7 98 56.1
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.4e-22 110.2 132 46.2
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.4e-22 109.4 141 46.1
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 9.0e-22 107.5 146 45.2
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 1.2e-21 107.1 158 43.0
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 1.5e-21 106.7 118 52.5
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 1.5e-21 106.7 124 47.6
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.0e-21 106.3 99 60.6
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 2.6e-21 105.9 146 44.5
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 8.4e-20 100.9 114 45.6
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 2.5e-19 99.4 135 43.7
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 5.5e-19 98.2 131 44.3
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 7.1e-19 97.8 98 51.0
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 3.5e-18 95.5 107 52.3
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.3e-17 93.6 123 45.5
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 1.9e-16 89.7 95 50.5
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 1.9e-16 89.7 90 52.2
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 3.3e-16 89.0 136 42.6
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 4.8e-15 85.1 67 58.2
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.1e-14 84.0 99 49.5
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 1.4e-14 83.6 101 49.5
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.8e-14 83.2 150 36.0
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.4e-14 82.8 148 37.2
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 4.1e-14 82.0 99 43.4
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 4.5e-13 78.6 131 37.4
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 3.8e-12 75.5 105 42.9
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 1.9e-11 73.2 134 37.3
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 7.2e-11 71.2 62 56.5
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.2e-10 70.5 69 50.7
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 2.2e-07 59.7 114 30.7


User provided reference genes

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