Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 7.1e-173 610.5 312 100.0
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.1e-108 394.8 310 66.8
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 2.6e-106 389.4 304 66.1
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 7.7e-103 377.9 307 69.4
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 6.1e-100 368.2 299 66.2
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 4.0e-99 365.5 303 64.0
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 4.4e-98 362.1 308 63.3
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.7e-97 359.0 306 64.1
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 7.7e-95 351.3 307 62.9
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.0e-94 350.9 309 60.5
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.5e-93 347.1 307 61.2
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 1.5e-93 347.1 308 60.7
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 3.2e-93 345.9 307 61.9
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 7.2e-93 344.7 308 60.7
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.2e-92 344.0 311 62.1
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 2.1e-92 343.2 305 60.0
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 2.7e-92 342.8 314 59.6
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 3.6e-92 342.4 309 60.5
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 6.1e-92 341.7 303 61.1
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 8.0e-92 341.3 303 61.1
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.4e-91 340.5 305 59.7
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 4.0e-91 339.0 307 60.3
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 6.8e-91 338.2 302 59.3
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 6.8e-91 338.2 312 60.9
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.2e-90 337.4 308 60.4
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.6e-90 336.3 301 61.8
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 3.4e-90 335.9 312 60.6
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.7e-89 333.6 298 62.1
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 3.7e-89 332.4 307 61.2
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.7e-89 332.4 307 59.6
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 5.4e-88 328.6 307 58.3
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.5e-87 325.5 308 58.4
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.9e-87 325.1 308 59.7
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 7.7e-87 324.7 302 58.3
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 1.3e-86 323.9 299 60.9
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 6.5e-86 321.6 308 57.5
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 8.5e-86 321.2 303 59.4
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 1.5e-85 320.5 312 59.0
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.9e-85 320.1 312 59.0
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.9e-85 320.1 312 59.0
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.5e-85 319.7 306 58.8
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.2e-84 317.4 305 58.7
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.6e-84 317.0 309 56.3
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.1e-84 316.6 316 58.9
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.1e-84 316.6 303 59.7
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 2.1e-84 316.6 313 56.5
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.8e-84 316.2 309 57.6
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.0e-83 314.3 309 58.9
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.4e-83 313.9 315 57.1
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 4.0e-83 312.4 306 54.6
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 7.5e-82 308.1 315 56.5
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 6.3e-81 305.1 307 56.7
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 3.1e-80 302.8 311 56.9
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 5.4e-80 302.0 311 55.9
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.2e-79 300.8 311 56.9
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 2.7e-79 299.7 299 56.5
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 2.7e-79 299.7 305 56.7
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 2.7e-79 299.7 300 56.3
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 3.5e-79 299.3 300 56.3
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 1.0e-78 297.7 300 56.3
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.0e-78 297.7 307 54.4
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 2.3e-78 296.6 305 55.7
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 3.3e-77 292.7 308 54.9
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.6e-76 290.4 242 63.6
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.0e-75 287.7 308 53.2
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.8e-75 287.0 304 54.3
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.8e-75 287.0 312 54.8
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 3.0e-75 286.2 281 57.7
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 3.0e-75 286.2 281 57.7
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 3.0e-75 286.2 281 57.7
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.8e-75 285.0 304 55.9
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 6.8e-75 285.0 303 55.4
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 1.2e-74 284.3 310 54.5
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.2e-74 284.3 313 51.8
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 9.8e-74 281.2 300 55.0
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.1e-72 277.7 317 50.8
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.8e-72 276.9 279 57.0
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.8e-72 276.9 308 53.9
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 4.1e-72 275.8 293 55.3
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 9.2e-72 274.6 312 50.6
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 7.8e-71 271.6 300 52.7
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 3.9e-70 269.2 297 53.2
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 5.6e-69 265.4 304 50.7
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.6e-68 263.8 309 50.8
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 4.7e-68 262.3 361 44.9
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 2.3e-67 260.0 309 50.5
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 3.1e-67 259.6 219 63.5
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 6.8e-67 258.5 297 50.8
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.2e-66 257.7 303 49.2
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 2.9e-65 253.1 331 50.5
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 9.2e-64 248.1 233 57.9
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.6e-63 247.3 311 48.2
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 2.7e-63 246.5 310 49.4
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.7e-62 243.8 312 47.8
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 6.6e-62 241.9 308 44.5
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 1.1e-61 241.1 311 48.6
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.3e-61 238.4 309 48.9
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 3.1e-59 233.0 312 45.2
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.0e-58 230.3 305 46.9
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 5.4e-56 222.2 311 44.7
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 8.9e-51 204.9 263 50.2
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 3.4e-50 203.0 171 62.0
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.1e-47 193.7 345 38.6
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 3.6e-44 183.0 242 45.5
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 4.7e-44 182.6 319 38.9
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.2e-42 177.9 311 40.5
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 7.1e-40 168.7 316 36.4
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 9.6e-37 158.3 141 60.3
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 7.6e-26 122.1 186 39.2
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 2.2e-25 120.6 140 45.7
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 7.9e-23 112.1 214 37.4
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.5e-08 63.9 125 33.6
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 3.9e-06 56.6 110 38.2


User provided reference genes

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