Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.1e-100 369.0 186 100.0
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.7e-89 332.8 186 90.3
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 9.7e-69 263.8 186 73.1
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 1.1e-67 260.4 187 72.7
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 1.8e-67 259.6 184 71.7
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 2.4e-67 259.2 183 71.6
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.5e-66 256.5 182 67.0
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 3.4e-66 255.4 183 71.6
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 5.9e-66 254.6 185 70.3
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 7.2e-64 247.7 175 69.1
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 9.4e-64 247.3 185 70.3
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 2.1e-63 246.1 182 66.5
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 4.6e-63 245.0 184 66.3
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 1.4e-62 243.4 185 68.1
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 3.0e-62 242.3 184 68.5
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 6.7e-62 241.1 184 64.7
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 3.3e-61 238.8 178 64.6
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 5.7e-61 238.0 185 65.4
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 9.7e-61 237.3 186 65.1
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 2.2e-60 236.1 184 67.4
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 2.2e-60 236.1 178 62.9
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 4.8e-60 235.0 179 63.1
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 4.8e-60 235.0 179 64.8
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 6.3e-60 234.6 186 65.1
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 8.2e-60 234.2 182 63.7
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 8.2e-60 234.2 179 62.6
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 4.1e-59 231.9 177 62.1
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 4.1e-59 231.9 184 65.8
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.3e-59 231.5 162 71.6
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.2e-58 230.3 162 66.0
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.2e-58 230.3 186 61.8
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 1.5e-58 229.9 179 64.2
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 2.0e-58 229.6 176 62.5
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 4.5e-58 228.4 192 63.0
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.5e-58 228.4 180 64.4
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 4.5e-58 228.4 180 62.2
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 7.7e-58 227.6 184 64.7
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.0e-57 227.3 162 68.5
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 1.0e-57 227.3 181 64.6
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 1.3e-57 226.9 181 62.4
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.3e-57 226.9 174 66.7
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.7e-57 226.5 174 66.7
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.7e-57 226.5 183 63.9
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 2.2e-57 226.1 180 63.3
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 2.2e-57 226.1 180 63.3
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.8e-57 225.3 177 63.8
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 5.0e-57 224.9 184 63.6
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 1.1e-56 223.8 156 67.3
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.9e-56 223.0 165 65.5
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 3.2e-56 222.2 161 72.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 3.2e-56 222.2 178 59.6
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 5.5e-56 221.5 166 66.3
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 7.2e-56 221.1 156 68.6
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 7.2e-56 221.1 156 66.7
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 1.2e-55 220.3 182 60.4
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.2e-55 220.3 171 64.3
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.7e-55 219.2 184 60.9
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 3.6e-55 218.8 174 64.9
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 3.6e-55 218.8 174 64.9
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 7.9e-55 217.6 164 63.4
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 7.9e-55 217.6 156 66.7
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.8e-54 216.5 184 59.8
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.8e-54 216.5 182 61.0
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 6.7e-54 214.5 186 59.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 2.0e-53 213.0 173 59.0
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 2.0e-53 213.0 168 63.1
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 2.6e-53 212.6 168 63.1
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 3.3e-53 212.2 183 56.8
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.3e-52 210.3 164 64.0
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.7e-52 209.9 173 58.4
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.7e-52 209.9 173 58.4
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.7e-52 209.9 173 58.4
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 2.2e-52 209.5 173 59.0
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 3.7e-52 208.8 173 57.8
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 4.8e-52 208.4 168 58.9
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 4.8e-52 208.4 177 58.2
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 4.8e-52 208.4 177 58.2
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 6.3e-52 208.0 177 58.2
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 6.3e-52 208.0 163 62.6
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 6.3e-52 208.0 163 60.7
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 8.2e-52 207.6 167 59.9
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 1.8e-51 206.5 173 57.2
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 2.4e-51 206.1 176 58.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 3.1e-51 205.7 185 56.2
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 9.1e-51 204.1 207 51.2
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.5e-50 202.2 173 57.8
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 4.5e-50 201.8 178 56.2
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 4.5e-50 201.8 163 60.1
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.3e-49 200.3 163 60.7
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.7e-49 199.9 171 59.6
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.7e-49 199.9 179 59.2
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.2e-49 199.5 159 59.7
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 2.2e-49 199.5 201 52.7
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 3.8e-49 198.7 178 57.3
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.9e-48 196.4 173 55.5
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.5e-48 194.9 156 63.5
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.6e-47 193.4 176 55.1
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.1e-47 193.0 186 55.4
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 8.0e-47 191.0 160 58.1
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 8.8e-46 187.6 181 53.6
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.5e-45 186.8 155 57.4
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 2.0e-45 186.4 181 53.6
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.2e-44 183.0 134 69.4
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 9.1e-43 177.6 163 50.3
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 7.2e-40 167.9 112 68.8
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 1.0e-38 164.1 114 70.2
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 8.8e-38 161.0 159 53.5
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.3e-33 147.1 138 54.3
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 3.2e-32 142.5 188 44.1
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.1e-31 138.3 107 63.6
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.0e-29 133.3 65 98.5
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 3.4e-29 132.5 144 47.9
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.3e-28 130.6 164 45.1
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 2.2e-28 129.8 148 48.6
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 6.6e-25 118.2 116 52.6
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.2e-20 103.2 125 46.4
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 1.1e-19 100.9 85 55.3
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 7.0e-19 98.2 120 50.0
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 2.9e-17 92.8 154 38.3
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.5e-16 89.7 51 90.2
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 2.8e-15 86.3 150 38.7
TAR636G1344 Trochodendron aralioides HOM05D005843 ORTHO05D415917 3.6e-15 85.9 43 97.7
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 7.5e-13 78.2 155 36.1


User provided reference genes

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