Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2077 Trochodendron aralioides HOM05D006877 ORTHO05D008735 4.1e-65 251.1 118 100.0
CSS0011113 Camellia sinensis var. sinensis HOM05D006877 ORTHO05D008735 2.1e-24 115.9 81 74.1
CANSAT21G1458 Cannabis sativa HOM05D006877 ORTHO05D008735 1.0e-23 113.6 109 52.3
ECA246G2862 Erigeron canadensis HOM05D006877 ORTHO05D008735 3.0e-23 112.1 83 62.7
Lj1A1033T71 Lonicera japonica HOM05D006877 ORTHO05D008735 2.1e-21 105.9 97 54.6
vmacro22172 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 2.8e-21 105.5 78 64.1
Cc03_g15580 Coffea canephora HOM05D006877 ORTHO05D008735 4.8e-21 104.8 81 60.5
Migut.F00097 Erythranthe guttata HOM05D006877 ORTHO05D008735 1.1e-20 103.6 78 62.8
HanXRQChr01g0027911 Helianthus annuus HOM05D006877 ORTHO05D008735 1.1e-20 103.6 86 60.5
MSTRG.8575 Avicennia marina HOM05D006877 ORTHO05D008735 2.0e-19 99.4 80 58.8
Cpa.g.sc39.73 Carica papaya HOM05D006877 ORTHO05D008735 1.7e-18 96.3 77 57.1
QL09p024038 Quercus lobata HOM05D006877 ORTHO05D008735 1.8e-15 86.3 56 71.4
Lsat_1_v5_gn_3_600 Lactuca sativa HOM05D006877 ORTHO05D008735 1.1e-14 83.6 92 51.1
Rhsim09G0212700 Rhododendron simsii HOM05D006877 ORTHO05D008735 1.1e-14 83.6 59 67.8
Oeu060385.2 Olea europaea HOM05D006877 ORTHO05D008735 8.1e-13 77.4 66 60.6
Sabra19G0059000 Salix brachista HOM05D006877 ORTHO05D008735 3.1e-12 75.5 52 67.3
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 6.9e-12 74.3 64 56.2
ATR0829G170 Amborella trichopoda HOM05D006877 ORTHO05D008735 9.9e-11 70.5 70 50.0
Solyc03g097000.3 Solanum lycopersicum HOM05D006877 ORTHO05D008735 3.8e-10 68.6 53 64.2
Sopen03g027750 Solanum pennellii HOM05D006877 ORTHO05D008735 8.4e-10 67.4 45 71.1
PGSC0003DMG400003143 Solanum tuberosum HOM05D006877 ORTHO05D008735 8.4e-10 67.4 45 71.1
Potri.019G049400 Populus trichocarpa HOM05D006877 ORTHO05D008735 1.1e-09 67.0 45 66.7
TAR381G0744 Trochodendron aralioides HOM05D006877 ORTHO05D008735 2.4e-09 65.9 43 72.1
MBI04_g20982_MAGBIO Magnolia biondii HOM05D006877 ORTHO05D008735 4.2e-09 65.1 42 69.0
SalBow4G0068 Salvia bowleyana HOM05D006877 ORTHO05D008735 1.2e-08 63.5 54 57.4
SalBow4G3121 Salvia bowleyana HOM05D006877 ORTHO05D008735 1.2e-08 63.5 54 57.4
EL10Ac3g05079 Beta vulgaris HOM05D006877 ORTHO05D008735 4.6e-08 61.6 45 57.8
Sp2g20510 Schrenkiella parvula HOM05D006877 ORTHO05D008735 1.3e-07 60.1 56 48.2
Sed0012706 Sechium edule HOM05D006877 ORTHO05D008735 1.3e-07 60.1 51 56.9
COL.COLO4_11806 Corchorus olitorius HOM05D006877 ORTHO05D008735 1.8e-07 59.7 64 46.9
CAN.G1131.10 Capsicum annuum HOM05D006877 ORTHO05D008735 1.1e-06 57.0 36 72.2
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 1.9e-06 56.2 32 81.2
AUR62028175 Chenopodium quinoa HOM05D006877 ORTHO05D008735 2.5e-06 55.8 45 51.1
AUR62002061 Chenopodium quinoa HOM05D006877 ORTHO05D008735 3.3e-06 55.5 42 57.1
CiPaw.05G220200 Carya illinoinensis HOM05D006877 ORTHO05D008735 5.6e-06 54.7 33 78.8
GSVIVG01024409001 Vitis vinifera HOM05D006877 ORTHO05D008735 5.6e-06 54.7 31 80.6
Thhalv10003569m.g Eutrema salsugineum HOM05D006877 ORTHO05D008735 9.6e-06 53.9 89 34.8


User provided reference genes

Program Settings