Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 2.1e-259 898.7 515 100.0
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 5.2e-80 302.8 500 42.4
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 4.3e-74 283.1 516 41.5
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 9.8e-71 271.9 521 36.5
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.9e-70 270.4 516 41.7
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 8.3e-70 268.9 447 40.0
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.9e-69 267.7 516 41.1
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 2.7e-68 263.8 501 38.3
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 5.0e-67 259.6 371 52.0
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.5e-66 258.1 600 33.5
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 9.5e-66 255.4 516 37.6
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 3.6e-65 253.4 498 37.8
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 6.2e-65 252.7 421 40.1
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 9.8e-63 245.4 530 37.5
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.4e-61 241.5 530 36.8
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 3.5e-60 236.9 487 40.7
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 3.5e-60 236.9 526 34.2
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.0e-59 235.3 540 32.2
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 8.6e-59 232.3 523 35.0
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.3e-58 230.3 516 39.9
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 4.3e-58 229.9 394 44.9
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 9.5e-58 228.8 615 31.5
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 6.2e-57 226.1 445 34.6
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 2.0e-55 221.1 340 42.6
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 9.9e-55 218.8 372 40.1
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 1.3e-54 218.4 529 33.8
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 2.9e-54 217.2 545 33.9
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 3.0e-51 207.2 200 56.0
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.5e-50 204.1 362 35.1
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 3.3e-50 203.8 497 31.6
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.4e-48 198.4 547 31.1
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 4.0e-48 196.8 525 31.8
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 4.4e-47 193.4 546 32.1
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 5.8e-47 193.0 504 31.3
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.4e-45 188.3 519 31.4
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 7.1e-45 186.0 519 30.1
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 4.6e-44 183.3 549 30.2
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 4.6e-44 183.3 508 30.7
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 3.9e-43 180.3 507 32.1
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.5e-42 178.3 526 29.8
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 4.3e-42 176.8 501 30.7
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 6.2e-41 172.9 555 31.5
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 8.1e-41 172.6 300 38.0
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 4.0e-40 170.2 434 32.0
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 2.6e-39 167.5 512 32.2
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 4.4e-39 166.8 469 31.3
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.3e-38 165.2 521 29.2
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 2.2e-38 164.5 555 28.8
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 3.8e-38 163.7 398 33.9
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 3.2e-37 160.6 521 28.8
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 4.2e-37 160.2 558 32.4
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 3.5e-36 157.1 524 28.8
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 1.7e-35 154.8 393 31.6
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 1.9e-34 151.4 196 45.9
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 2.5e-34 151.0 202 42.6
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 1.1e-32 145.6 518 27.0
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 4.0e-32 143.7 198 41.4
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 3.4e-31 140.6 524 26.1
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 9.9e-31 139.0 177 44.6
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 1.7e-30 138.3 167 46.1
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 2.9e-30 137.5 532 26.5
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 4.9e-30 136.7 516 25.8
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 8.4e-30 136.0 528 25.0
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.1e-29 135.6 527 26.0
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 3.2e-29 134.0 194 43.3
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 4.2e-29 133.7 370 29.7
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 5.4e-29 133.3 483 27.3
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 7.1e-29 132.9 436 29.4
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 1.6e-28 131.7 519 25.0
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 1.0e-27 129.0 393 25.2
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 2.3e-27 127.9 176 42.0
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 8.7e-27 125.9 450 29.3
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 1.5e-26 125.2 384 25.0
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.9e-26 124.8 505 27.7
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 1.6e-25 121.7 199 37.2
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 8.1e-25 119.4 399 24.8
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.4e-24 118.6 175 41.1
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 1.8e-24 118.2 198 33.8
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.2e-23 115.5 509 29.3
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 4.5e-23 113.6 199 39.7
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 2.9e-22 110.9 293 33.8
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 8.4e-22 109.4 97 52.6
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 9.3e-21 105.9 359 30.9
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 1.6e-20 105.1 407 29.5
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 4.6e-20 103.6 467 25.9
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 1.3e-19 102.1 497 27.8
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 3.9e-19 100.5 467 28.7
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 6.7e-19 99.8 381 29.1
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.5e-18 97.8 109 40.4
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 1.8e-16 91.7 172 39.0
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.4e-16 91.3 436 27.1
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 3.1e-16 90.9 430 26.0
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 2.0e-15 88.2 158 31.0
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 5.8e-15 86.7 387 24.3
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 3.8e-14 84.0 122 46.7
CiPaw.07G104400 Carya illinoinensis HOM05D007164 ORTHO05D008802 1.1e-13 82.4 187 36.4
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 3.2e-13 80.9 101 44.6
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.6e-12 78.6 172 33.1
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 3.5e-12 77.4 201 29.4
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 2.3e-11 74.7 388 23.5
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 8.7e-11 72.8 167 28.1
Zm00001eb133720 Zea mays HOM05D000144 ORTHO05D008802 2.2e-09 68.2 93 45.2
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 3.7e-09 67.4 189 41.3


User provided reference genes

Program Settings