Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 1.7e-149 532.7 286 100.0
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 1.3e-59 234.2 306 53.3
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 1.0e-56 224.6 326 49.7
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 6.5e-56 221.9 318 48.4
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 6.5e-56 221.9 312 49.0
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 1.4e-55 220.7 306 48.0
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 9.3e-55 218.0 319 48.3
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.0e-53 213.0 298 49.7
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 6.7e-53 211.8 297 49.8
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 6.7e-53 211.8 297 49.8
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 6.7e-53 211.8 297 49.8
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 5.7e-52 208.8 310 46.8
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 2.2e-51 206.8 270 52.2
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 6.3e-51 205.3 312 49.4
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 1.5e-49 200.7 312 45.2
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 2.0e-49 200.3 332 45.2
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.9e-48 196.4 306 46.7
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 3.8e-48 196.1 307 50.2
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 8.5e-48 194.9 265 50.2
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 8.5e-48 194.9 316 46.5
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 1.4e-47 194.1 310 45.5
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 3.2e-47 193.0 305 42.3
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 5.5e-47 192.2 270 50.4
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 5.5e-47 192.2 270 50.4
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 7.2e-47 191.8 310 45.2
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 1.6e-46 190.7 309 48.2
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 2.3e-45 186.8 314 48.1
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 3.0e-45 186.4 320 44.7
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 3.7e-43 179.5 329 43.5
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 8.2e-43 178.3 279 47.7
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 1.4e-42 177.6 299 44.5
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 1.2e-41 174.5 261 48.3
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 3.4e-41 172.9 298 45.0
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 1.9e-39 167.2 316 44.6
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 4.2e-39 166.0 304 43.8
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 1.6e-38 164.1 291 43.3
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 1.6e-38 164.1 318 43.1
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 4.7e-38 162.5 314 43.0
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 7.9e-38 161.8 297 44.1
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 1.0e-37 161.4 245 47.3
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.0e-37 161.4 311 45.7
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 2.3e-37 160.2 286 45.1
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 3.3e-36 156.4 277 39.4
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 4.4e-36 156.0 296 44.6
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 1.0e-32 144.8 313 40.9
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 2.9e-32 143.3 312 41.0
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 6.5e-32 142.1 307 42.7
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 8.5e-32 141.7 275 39.6
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 1.5e-31 141.0 313 40.6
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 7.2e-31 138.7 300 40.7
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 9.4e-31 138.3 305 42.0
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 1.6e-30 137.5 169 49.7
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 2.1e-30 137.1 272 45.6
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 2.7e-30 136.7 297 38.0
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 6.1e-30 135.6 312 38.5
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 6.1e-30 135.6 252 46.4
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 1.4e-29 134.4 329 35.3
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 5.2e-29 132.5 228 48.7
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 2.0e-28 130.6 258 43.0
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 1.7e-27 127.5 289 40.1
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 2.8e-27 126.7 334 38.9
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 6.3e-27 125.6 284 38.7
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 1.1e-26 124.8 262 42.4
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 1.4e-26 124.4 307 37.5
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 1.4e-26 124.4 363 35.5
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 2.4e-26 123.6 317 38.2
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 1.6e-25 120.9 261 43.3
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 7.7e-25 118.6 364 31.0
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 7.7e-25 118.6 268 41.4
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 1.3e-24 117.9 348 34.8
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 8.5e-24 115.2 283 41.0
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 5.5e-23 112.5 310 37.1
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 4.7e-22 109.4 349 35.0
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 6.8e-21 105.5 347 33.7
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 3.4e-20 103.2 355 33.0
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 3.4e-20 103.2 348 33.6
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 1.1e-18 98.2 294 36.1
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 9.1e-18 95.1 291 35.1
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 9.1e-18 95.1 286 33.2
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 3.2e-15 86.7 258 32.9
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 7.2e-15 85.5 200 39.5
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 9.5e-15 85.1 258 38.4
arahy.Tifrunner.gnm1.ann1.Z61DE3 Arachis hypogaea HOM05D007548 ORTHO05D009527 1.6e-14 84.3 254 31.9
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 1.4e-13 81.3 257 40.9
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 2.3e-13 80.5 232 34.1
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 4.0e-13 79.7 315 33.7
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 2.6e-12 77.0 393 28.8
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 3.4e-12 76.6 308 31.5
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 7.5e-12 75.5 312 30.8
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 9.8e-12 75.1 302 31.1
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 9.8e-12 75.1 302 31.1
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 9.8e-12 75.1 302 31.1
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 1.8e-10 70.9 312 29.5
MBI17_g42494_MAGBIO Magnolia biondii HOM05D007548 ORTHO05D009527 5.6e-07 59.3 159 39.0
arahy.Tifrunner.gnm1.ann1.VN71XR Arachis hypogaea HOM05D000324 ORTHO05D010724 3.6e-06 56.6 224 31.7
HPP92_019364 Vanilla planifolia HOM05D007548 ORTHO05D009527 4.7e-06 56.2 243 34.2
Aqoxy5G03061 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 8.0e-06 55.5 119 40.3


User provided reference genes

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